FFCP PHASE1:Hg19::chr13:44947941..44947996,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387923 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20607 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N6R1 | |||
|association_with_transcript=0bp_to_ENST00000379179,NM_001010897,uc001uzj.2,uc001uzk.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SERP2_5end | |||
|id=chr13:44947941..44947996,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.42e-10!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.15e-32!57;UBERON:0005068!6.15e-32!57;UBERON:0006241!6.15e-32!57;UBERON:0007135!6.15e-32!57;UBERON:0003075!1.82e-30!86;UBERON:0007284!1.82e-30!86;UBERON:0002346!4.99e-29!90;UBERON:0002616!1.76e-28!59;UBERON:0007023!1.29e-27!115;UBERON:0005743!6.91e-26!86;UBERON:0000073!1.47e-25!94;UBERON:0001016!1.47e-25!94;UBERON:0001017!1.66e-25!82;UBERON:0003080!1.80e-24!42;UBERON:0002780!2.14e-24!41;UBERON:0001890!2.14e-24!41;UBERON:0006240!2.14e-24!41;UBERON:0000483!2.40e-24!309;UBERON:0004121!2.43e-24!169;UBERON:0000119!3.78e-24!312;UBERON:0000475!5.87e-24!365;UBERON:0000924!9.84e-24!173;UBERON:0006601!9.84e-24!173;UBERON:0003056!1.32e-23!61;UBERON:0000955!4.75e-23!69;UBERON:0006238!4.75e-23!69;UBERON:0000481!1.95e-22!347;UBERON:0000033!4.17e-21!123;UBERON:0000153!7.31e-21!129;UBERON:0007811!7.31e-21!129;UBERON:0002020!1.28e-20!34;UBERON:0003528!1.28e-20!34;UBERON:0001893!1.71e-20!34;UBERON:0002791!7.07e-20!33;UBERON:0001869!2.14e-19!32;UBERON:0000025!2.42e-19!194;UBERON:0004111!8.92e-18!241;UBERON:0000064!1.68e-17!219;UBERON:0000477!2.89e-16!286;UBERON:0002619!3.92e-16!22;UBERON:0000468!6.14e-16!659;UBERON:0000956!6.15e-15!25;UBERON:0000203!6.15e-15!25;UBERON:0001950!7.71e-15!20;UBERON:0000467!1.54e-13!625;UBERON:0000922!2.17e-13!612;UBERON:0000480!2.70e-13!626;UBERON:0002050!1.41e-12!605;UBERON:0005423!1.41e-12!605;UBERON:0000923!2.74e-12!604;UBERON:0005291!2.74e-12!604;UBERON:0006598!2.74e-12!604;UBERON:0002532!2.74e-12!604;UBERON:0000062!1.02e-09!511;UBERON:0000914!6.54e-09!83;UBERON:0002329!6.54e-09!83;UBERON:0003077!6.54e-09!83;UBERON:0003059!6.54e-09!83;UBERON:0007282!6.54e-09!83;UBERON:0009618!6.54e-09!83;UBERON:0007285!6.54e-09!83;UBERON:0003076!1.48e-08!15;UBERON:0003057!1.48e-08!15;UBERON:0005256!2.78e-08!143;UBERON:0000486!1.24e-07!82;UBERON:0004290!1.52e-07!70;UBERON:0004732!1.94e-07!13;UBERON:0002420!3.01e-07!9;UBERON:0007245!3.01e-07!9;UBERON:0010009!3.01e-07!9;UBERON:0010011!3.01e-07!9;UBERON:0000454!3.01e-07!9;UBERON:0002308!3.55e-07!9;UBERON:0000125!3.55e-07!9;UBERON:0000479!7.36e-07!787;UBERON:0004733!7.40e-07!12;UBERON:0002028!7.40e-07!12;UBERON:0007277!7.40e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.31e-18;41!UBERON:0001890;1.31e-18;41!UBERON:0003528;2.47e-18;34!UBERON:0002020;2.47e-18;34!UBERON:0001869;2.75e-18;32!UBERON:0001893;2.96e-18;34!UBERON:0002791;3.16e-18;32!UBERON:0000073;8.30e-18;53!UBERON:0002616;8.30e-18;53!UBERON:0002619;3.67e-17;22!UBERON:0001950;8.93e-16;20!UBERON:0000956;1.99e-15;25!UBERON:0000203;1.99e-15;25!UBERON:0001017;1.20e-11;75!UBERON:0000955;1.26e-11;68!UBERON:0001016;6.56e-10;83!UBERON:0007023;1.01e-08;114!UBERON:0010314;2.75e-08;132!UBERON:0004732;6.27e-08;13!UBERON:0002420;1.16e-07;9!UBERON:0007245;1.16e-07;9!UBERON:0010009;1.16e-07;9!UBERON:0010011;1.16e-07;9!UBERON:0000454;1.16e-07;9!UBERON:0000125;1.36e-07;9!UBERON:0002308;1.36e-07;9!UBERON:0004733;2.63e-07;12!UBERON:0002028;2.63e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,8.71e-35,82;UBERON:0007284,8.71e-35,82;UBERON:0010314,1.45e-33,132;UBERON:0001049,1.74e-33,56;UBERON:0005068,1.74e-33,56;UBERON:0006241,1.74e-33,56;UBERON:0007135,1.74e-33,56;UBERON:0002346,6.60e-33,86;UBERON:0000073,1.61e-31,53;UBERON:0002616,1.61e-31,53;UBERON:0010371,1.05e-28,104;UBERON:0007023,3.99e-28,114;UBERON:0001017,2.62e-26,81;UBERON:0001016,1.59e-25,89;UBERON:0002780,1.64e-25,41;UBERON:0001890,1.64e-25,41;UBERON:0003080,1.64e-25,41;UBERON:0006240,1.64e-25,41;UBERON:0003056,2.35e-25,61;UBERON:0004121,1.00e-24,171;UBERON:0000924,1.00e-24,171;UBERON:0006601,1.00e-24,171;UBERON:0000955,1.93e-24,68;UBERON:0006238,1.93e-24,68;UBERON:0000483,9.89e-23,306;UBERON:0000119,2.34e-22,309;UBERON:0003528,1.81e-21,34;UBERON:0002020,1.81e-21,34;UBERON:0001893,2.46e-21,34;UBERON:0001869,3.66e-20,32;UBERON:0002791,4.24e-20,32;UBERON:0000025,2.57e-17,192;UBERON:0002619,3.75e-17,22;UBERON:0011216,8.28e-17,223;UBERON:0001950,9.09e-16,20;UBERON:0000956,2.09e-15,25;UBERON:0000203,2.09e-15,25;UBERON:0004111,7.74e-15,240;UBERON:0005423,1.53e-13,581;UBERON:0002050,2.52e-13,564;UBERON:0000922,3.11e-13,592;UBERON:0000923,1.19e-12,560;UBERON:0010316,1.19e-12,560;UBERON:0005291,1.19e-12,560;UBERON:0006598,1.19e-12,560;UBERON:0010317,1.19e-12,560;UBERON:0002532,1.19e-12,560;UBERON:0003076,4.78e-09,15;UBERON:0003057,4.78e-09,15;UBERON:0000479,6.22e-09,773;UBERON:0004732,7.52e-08,13;UBERON:0002420,1.20e-07,9;UBERON:0007245,1.20e-07,9;UBERON:0010009,1.20e-07,9;UBERON:0010011,1.20e-07,9;UBERON:0000454,1.20e-07,9;UBERON:0000125,1.43e-07,9;UBERON:0002308,1.43e-07,9;UBERON:0004733,3.14e-07,12;UBERON:0002028,3.14e-07,12;UBERON:0007277,3.14e-07,12;UBERON:0003077,4.84e-07,72;UBERON:0007285,4.84e-07,72;UBERON:0007524,5.85e-07,73;UBERON:0003104,7.54e-07,160;UBERON:0009142,7.54e-07,160 | |||
|phase1_expression=3.45188920614058,2.14100523890983,5.07435854745496,4.00293193412522,5.36353313312745,7.85104671690332,0,1.26343974685366,3.65659879479774,7.61775203154677,15.3516256953934,3.49506195408276,2.63766978228454,4.33182235360163,6.2965501388304,0.672325146451775,1.80808358407193,0.730310090387373,0.975865597581014,3.20114750999649,3.87601313364081,3.13454721478088,0.572471974262113,3.14811177667634,1.75759695432724,0,0,0,1.96682138424452,0,0.619264493264304,5.51652734687356,4.51808878167375,2.58827807116751,0,0,0,0,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,1.14950487990897,0.661044872784862,1.90810750907073,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0.34362744548263,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0.821127996921047,0,0,0,0,0,1.79007586580942,4.3372698286148,7.01873074890245,9.70471677037519,2.3858578411533,6.32625331393427,2.3633704291017,3.76939975686359,2.72287835648691,7.92423406761161,2.91436230634034,1.85392221392215,0,0,0,0,0,0.74291500265913,0.39752481473341,0,0,0.56530794192401,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0.402829317109147,1.52054421143703,0.24406205754817,0,0,0.446498641420399,0,0.337834441449967,0,0,1.09921046358244,0,0,1.3082821564276,2.48485975847659,1.8994576749687,2.25095607382472,0.860509862246441,1.77334191099179,3.36406560085384,0,2.96001058100592,1.8672662123986,0.808264032418128,1.47115712802113,1.36221684880438,1.72852777344,1.87457145467037,3.43376084513353,4.56377457235559,2.69007624993242,2.70099346880659,2.75184005425824,2.66856532734272,3.0623125688234,2.82518929817066,3.82305390350332,5.94001428641027,5.19260551484969,5.46096817162816,5.03032699271367,2.69337782326506,1.87677779807946,1.93944880838928,0.877955241761676,2.45190236639216,5.40857012063748,1.36118619792025,1.25572744982203,1.70845911054854,1.48352330811693,3.00091096084402,1.75189299705346,2.31876486041066,2.60563598864226,1.0126579934476,1.16924406193438,3.28163906517349,2.57739716198438,2.10139873864455,1.77504796258307,1.41052937518696,0.847802961552438,0.773043412653187,0.272746120590835,1.72082757233402,0.487894824518382,1.45782745153634,0.813357600086629,1.96956004529204,1.51392510525377,2.91981887260664,7.8224766164908,3.85944562915731,5.52539685409922,3.25057549622385,4.33127689001751,0,0,0,0.110293972732394,0,0,0,0,0,1.4763109092493,4.20725321410337,6.173610169971,7.3504355692771,3.80265104465493,3.9313088667105,3.54473944008842,0,0,2.40194934417936,0.658501712451753,5.62008766288098,0.603173834469785,1.574003567695,2.93227474779292,4.15973914111831,4.3299402607582,2.20267769452646,2.11335649624479,0.721832238805369,0,0.190254152234598,0,0,0,0,0,4.68669169933885,1.6798212819886,1.84307626415102,0.358234090811393,0.581267877027924,2.30029607499127,0.492663237895943,3.78608266256872,8.08579650609011,4.61183850934277,9.08945520669936,0.571481048629521,2.67391897890794,2.34434894420094,5.13217338068116,1.64523988325318,0,1.42913216315289,1.23344192779897,0.43596006883328,1.24675085895615,1.03417372606222,7.15312891703765,1.690605505112,2.39344304926383,5.2003718455683,3.60090323966999,2.83698264046557,3.46348832720929,1.71573592389777,3.25572963234866,0,2.60588947434988,1.77695974371273,2.37585561880029,3.31583314765545,0.871533458600294,4.1988656296464,0,0,0,2.87549826589899,4.59447743336456,11.4109524032575,2.60606352001643,5.13690806375959,3.58121926479791,0,0,0.431255149719035,0.256686072559497,2.28685161800217,2.60279707715243,12.3726210044431,25.9650211268241,22.9657950595139,0,0,0,1.8403723757871,6.00204625271613,4.06897535549603,4.99130067673937,5.17444067511769,8.04282316673067,6.09135357962109,5.41702979509894,6.82222512167955,5.17365356462525,0.664225598535437,2.76553752812555,3.5622281931914,3.32861967686659,4.11772108573027,0.413536052245775,0.215714200818617,0.106727557803444,8.79069957194152,4.99306318531491,7.86214762657169,4.71404834855676,0.920771839728375,4.49056151092918,2.69092213436972,1.53512174720011,5.79074116116987,1.48418066444991,3.70103265126373,4.79416658345443,3.20295908453856,5.19254429183621,5.694308544538,0,0.802025881213139,1.10497186723076,3.21480454860899,3.45973219212762,4.72047893853927,2.25599806453706,3.00359814707218,3.13739907670742,8.76835347919564,2.11103257785751,0,0.340187410553031,1.94324324491925,0,5.96082162596476,7.5253466078228,1.27438136522519,4.98645605357235,2.0148727924996,1.09629938322967,0.784306353074702,1.53870075069834,2.62411716559765,2.92840555197873,2.7821073144885,0.824125183365091,0.165018999841176,1.72279661398852,1.30012049207304,6.42735719376638,3.38347514022427,3.38906957652218,3.68408819342711,1.65403886981437,3.00776685631166,3.0453505721988,3.15338521439573,1.86967274858148,0,1.15314040419064,1.91419068741876,0.30347334256665,0.929691098594572,0.94443704049192,2.0911118104818,1.23213432070436,4.7907542728532,9.5692629128258,5.18907813490976,3.14874750832381,1.116475108079,2.84741482246853,1.33441135746677,2.81487570442467,2.56763392820352,6.68226820644467,0.78494864019923,2.33834194858309,3.56898138656871,3.65218447271628,5.25674452090622,6.34041284692033,8.8464275810186,3.90106991271672,3.65570234446927,4.22600587027022,1.77449884830381,2.82810863907426,14.6910551606316,3.30819206127675,2.65375590096488,3.5076070820301,5.20897980840019,5.24715801637306,3.04365565444056,1.239293992399,3.3803472303869,1.72093622644862,1.27723753317057,4.9933947207375,4.25713276884717,9.49984358839489,12.8425008254362,1.89736586882858,4.89908608342976,3.65644028356946,2.01090682660736,3.26672954583968,2.35359501941948,3.01353760869861,5.05414427002877,2.66058092122005,2.29723400206959,0.507447609232169,0,0,0.714695326373367,0,0,0,0.79312517629427,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,5.01363417949149,8.31501106331388,4.91457123358771,27.8361341374563,42.0601555067433,0,0,1.05562704063997,3.18796781201712,3.03912307084262,0,0.715880777515084,0,0.933118762985422,0.359473404589307,0,0,1.38100767891707,0,0,42.6506408281896,29.314719019145,63.8764153603821,0,0,3.62499787717397,0,0,0,3.79217710565611,0,2.60437492399938,30.1152071176705,37.3848959738765,10.6807215421958,17.0292060294086,27.1903809437264,44.3158502251025,0,0,4.46311499322023,0,0,0,0,1.5950057986596,4.48828207669125,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,4.42287822516696,5.49927130440263,0,0,0,10.9863846758504,0.802577647298789,27.64320459559,0,0,0,5.12959723704208,3.62972148145992,37.6469496805503,2.33790344625405,0,0,0,0,0,0,0,0,0.520679215005393,0,0,3.66926003308263,0,0,0,0,2.81268147816416,2.82419605412801,9.0392296312213,0,0.596143835108969,22.6019541562487,6.2576442475137,0,4.69596588426576,4.39581141080687,0,0,0.857974989309823,0,0,4.9495747269527,0,0,0,0,43.8306810758146,14.7857809203352,0,6.87624706271931,1.57732412567589,7.54062483435086,7.56229399238556,5.0251111720377,9.38491302345258,18.027494021736,25.6647176058153,3.96382487671685,1.44119953416961,0,0,0,0,0,0,29.4234985229442,30.7819697812161,0.803765742325096,0.825236619583403,0,0,0,23.5100784266555,0,2.44297692627514,3.30463905250488,0,1.43429871466276,0,12.8645158747206,13.2418394073086,0.25426853765475,2.71499800876856,1.72844298240254,1.95952416065645,5.98650957812437,0,0.681552087141687,1.01980882368113,2.05173127149315,1.32506888912221,34.518549348534,22.4795422962573,0,0.704815022316672,2.24253566392159,0.943225830597996,2.89967338743037,0,0,0,1.27668251554036,0.544017803369474,0.7520696820681,0,0.655745261419609,0,38.9869999185474,39.2924572984321,36.555751766298,14.9086390879419,14.8644929059382,14.4684618853423,0,0,0,0,0,0,3.4781046866598,3.28360566351123,2.10341978862502,1.66441758450784,6.25029917407794,5.78606174030923,5.33886732957922,6.17868184671694,4.99062048418689,3.88593001456951,5.47064054961645,5.73468361789329,7.64665290678128,4.03683687878274,6.22059311761283,1.32920857278997,4.17396049449387,3.90669783392768,4.56966254602554,3.25496586563729,3.09142720644351,3.97419061057207,5.10437135866343,1.19428766609585,3.20022211730523,5.49433128292469,6.73498977531838,3.78554694685953,0,0,1.30497145982606,0,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0.353378291891762,0,0,0,0,0,40.5097217924571,0,0,0.163565394255844,0,0,0,0,0,0,0,8.10066181108099,0.279759015438889,1.24415452006595,17.6494232399039,3.66604358748718,0,11.0301734573934,0,3.82634856183029,0.247871528518004,0,3.4980478571876,0,2.40171224485641,1.05802783107205,7.96238241118321,20.6175812559635,34.0071783181404,39.4295631871164,44.1000183117623,50.1622675481219,32.0889651433971,39.2385818885398,19.9877188362816,0,0,0,0,1.1441462864015,0,0,5.41514364114652,0,2.34454203369928,0,0,1.03499260351932,22.9627787702542,35.929592536237,39.8905517247285,27.3322141935738,26.8017656418928,0,2.48105589194647,1.40696995487696,0,17.6781605839835,11.0973628332212,6.06965604236632,7.96817669729542,1.1531308121143,0,1.02892805662451,16.1088267155091,31.7024768572933,0.709163045303809,0.889851215136553,4.00314773537622,31.4231179832004,1.96190514319652,9.13158720509496,0,0,7.14765441766563,0,0,0,4.00855682365126,2.69381013411948,0.6828739083758,2.76503864725637,0,0.591660003652827,0.340853619036631,4.23387050190929,1.60374807980835,0,0,0,0,0,0,2.46390736454993,8.11870101936739,5.34282092365053,0,2.98426162742052,2.37840181555137,0.67767649223376,0.659643100472575,3.17021971490014,1.77500563648273,3.71551252856727,0.470317296361523,2.45148321753905,9.42706188406504,24.5385583893682,8.91139200981258,24.0913764722538,4.75795921125887,0.469919589899268,1.54698931136585,0,0,0,0,5.11235471772562,1.83491713361816,11.6105062352676,0,31.2080939976298,54.9801869828876,4.2322147241232,4.83593523616777,7.39481005810269,3.46101249699031,1.13549782351571,0,0.886889507080059,0.305966489225945,0.801652215796681,0,0.50141507858475,4.6225005913126,4.01946195234268,18.2417276680931,17.0664443172127,2.55880778281177,6.18967521805725,3.74615677048835,3.78655757204733,5.71872499161128,1.40023748211963,1.81905470062397,2.61260097476354,2.05339980651169,1.21233695426258,1.79305513481691,5.65522606128223,0.0814032686109745,0.533636729388577,7.7228912914776,0,0,5.13414065568039,5.2896503181046,4.66029741929859,2.41528552309231,0.320568492303233 | |||
|short_description=p1@SERP2 | |||
}} |
Revision as of 17:33, 11 January 2014
Short description: | p1@SERP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SERP2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000379179, NM_001010897, uc001uzj.2, uc001uzk.2_5end |
EntrezGene: | SERP2 |
HGNC: | 20607 |
UniProt: | Q8N6R1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data