FFCP PHASE1:Hg19::chr13:28902632..28902665,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2260 | |||
|description=CAGE_peak_at_chr13:28902632..28902665,+ | |||
|id=chr13:28902632..28902665,+ | |||
|ontology_enrichment_celltype=CL:0000453!4.78e-40!5;CL:0000990!1.93e-22!8;CL:0000451!1.99e-18!10;CL:0001014!1.64e-07!2;CL:0001016!1.64e-07!2;CL:1000415!2.25e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000453;3.22e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.97e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.51e-17;10!UBERON:0005564;7.51e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.64e-17!3;UBERON:0004854!1.64e-17!3;UBERON:0009034!1.64e-17!3;UBERON:0002095!1.64e-17!3;UBERON:0004782!1.64e-17!3;UBERON:0003281!1.64e-17!3;UBERON:0009664!1.64e-17!3;UBERON:0002296!1.64e-17!3;UBERON:0005602!1.64e-17!3;UBERON:0001179!1.64e-17!3;UBERON:0006293!1.64e-17!3;UBERON:0002146!8.58e-14!1;UBERON:0005623!8.58e-14!1;UBERON:0004177!4.92e-08!7;UBERON:0001870!2.12e-07!2;UBERON:0000473!2.61e-07!8;UBERON:0000945!3.90e-07!8;UBERON:0010039!3.90e-07!8;UBERON:0002075!9.97e-07!18;UBERON:0002323!9.98e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.98e-21;8!UBERON:0003135;2.02e-15;11!UBERON:0000991;1.42e-08;21!UBERON:0003101;3.15e-08;22!UBERON:0000079;3.15e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.98e-21,8;UBERON:0003135,2.02e-15,11;UBERON:0000991,1.42e-08,21;UBERON:0009196,1.42e-08,21;UBERON:0009117,1.42e-08,21;UBERON:0005564,1.42e-08,21;UBERON:0004176,3.15e-08,22;UBERON:0003101,3.15e-08,22;UBERON:0000079,3.15e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90649936670635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,1.79921933681429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74291005901951,4.55539021265503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:28902632..28902665,+ | |||
}} |
Revision as of 17:06, 11 January 2014
Short description: | p@chr13:28902632..28902665, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:28902632..28902665, + |
Coexpression cluster: | C2260_adult_testis_lymphangiectasia_gall_pagetoid_small_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.97e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 8.98e-21 | 8 |
male reproductive organ | 2.02e-15 | 11 |
gonad | 1.42e-08 | 21 |
indifferent external genitalia | 1.42e-08 | 21 |
indifferent gonad | 1.42e-08 | 21 |
gonad primordium | 1.42e-08 | 21 |
external genitalia | 3.15e-08 | 22 |
male organism | 3.15e-08 | 22 |
male reproductive system | 3.15e-08 | 22 |