FFCP PHASE1:Hg19::chr13:23949671..23949702,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26278 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10519 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NZJ4 | |||
|association_with_transcript=0bp_to_ENST00000402364,uc001uoo.2_5end | |||
|description=CAGE_peak_3_at_SACS_5end | |||
|id=chr13:23949671..23949702,- | |||
|ontology_enrichment_celltype=CL:0000055!1.55e-11!180;CL:0000057!1.10e-07!75;CL:0002319!9.63e-07!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.52e-08,76;CL:0002319,9.28e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.77e-12!169;UBERON:0000924!1.19e-11!173;UBERON:0006601!1.19e-11!173;UBERON:0000033!4.52e-10!123;UBERON:0000153!2.08e-09!129;UBERON:0007811!2.08e-09!129;UBERON:0000475!2.89e-09!365;UBERON:0000073!3.61e-09!94;UBERON:0001016!3.61e-09!94;UBERON:0005743!1.25e-07!86;UBERON:0001017!2.16e-07!82;UBERON:0003075!7.92e-07!86;UBERON:0007284!7.92e-07!86;UBERON:0003056!9.99e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.91e-12,171;UBERON:0000924,2.91e-12,171;UBERON:0006601,2.91e-12,171;UBERON:0001016,2.59e-09,89;UBERON:0010314,9.07e-08,132;UBERON:0001017,9.80e-08,81;UBERON:0003056,3.83e-07,61;UBERON:0000955,3.89e-07,68;UBERON:0006238,3.89e-07,68;UBERON:0003075,4.59e-07,82;UBERON:0007284,4.59e-07,82;UBERON:0010371,5.36e-07,104;UBERON:0002346,6.30e-07,86 | |||
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| |||
|short_description=p3@SACS | |||
}} |
Revision as of 16:57, 11 January 2014
Short description: | p3@SACS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SACS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000402364, uc001uoo.2_5end |
EntrezGene: | SACS |
HGNC: | 10519 |
UniProt: | Q9NZJ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.52e-08 | 76 |
neural cell | 9.28e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.91e-12 | 171 |
ectoderm | 2.91e-12 | 171 |
presumptive ectoderm | 2.91e-12 | 171 |
nervous system | 2.59e-09 | 89 |
structure with developmental contribution from neural crest | 9.07e-08 | 132 |
central nervous system | 9.80e-08 | 81 |
pre-chordal neural plate | 3.83e-07 | 61 |
brain | 3.89e-07 | 68 |
future brain | 3.89e-07 | 68 |
neural plate | 4.59e-07 | 82 |
presumptive neural plate | 4.59e-07 | 82 |
ecto-epithelium | 5.36e-07 | 104 |
neurectoderm | 6.30e-07 | 86 |