FFCP PHASE1:Hg19::chr12:123011476..123011527,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65117 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30559 | |||
|TSSclassifier=strong | |||
|UniProt=E1B6W4,E9PI52,F5GYD2,F5H1Z2 | |||
|association_with_transcript=0bp_to_ENST00000344591,ENST00000433877,ENST00000525335,ENST00000525387,ENST00000525570,ENST00000526560,ENST00000527461,ENST00000528279_5end | |||
|coexpression_cluster_id=C2194 | |||
|description=CAGE_peak_1_at_RSRC2_5end | |||
|id=chr12:123011476..123011527,- | |||
|ontology_enrichment_celltype=CL:0000037!9.39e-23!172;CL:0000566!9.39e-23!172;CL:0000738!2.60e-22!140;CL:0002032!8.49e-21!165;CL:0000837!8.49e-21!165;CL:0000988!2.07e-20!182;CL:0002031!2.20e-18!124;CL:0002087!1.82e-16!119;CL:0002057!2.10e-15!42;CL:0000860!4.92e-15!45;CL:0000763!4.87e-13!112;CL:0000049!4.87e-13!112;CL:0000766!6.80e-12!76;CL:0000839!1.47e-10!70;CL:0000557!6.32e-10!71;CL:0002009!6.12e-09!65;CL:0002194!3.12e-08!63;CL:0000576!3.12e-08!63;CL:0000040!3.12e-08!63;CL:0000559!3.12e-08!63;CL:0000542!8.19e-08!53;CL:0000051!8.19e-08!53;CL:0000838!1.25e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.69e-13;33!CL:0002057;4.69e-13;33!CL:0000576;9.85e-09;48!CL:0002087;1.53e-07;104!CL:0000473;2.50e-07;39!CL:0000234;2.50e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.35e-23,168;CL:0000738,1.42e-22,136;CL:0000988,3.96e-21,177;CL:0002032,5.85e-21,161;CL:0000837,5.85e-21,161;CL:0002031,1.24e-18,120;CL:0002087,1.08e-16,115;CL:0000860,2.10e-15,42;CL:0002057,2.10e-15,42;CL:0000763,3.28e-13,108;CL:0000049,3.28e-13,108;CL:0000766,3.45e-12,72;CL:0000473,7.11e-11,48;CL:0000234,7.11e-11,48;CL:0000839,7.75e-11,66;CL:0000557,3.58e-10,67;CL:0002009,3.52e-09,61;CL:0002194,1.88e-08,59;CL:0000576,1.88e-08,59;CL:0000040,1.88e-08,59;CL:0000559,1.88e-08,59;CL:0000542,8.19e-08,53;CL:0000051,8.19e-08,53;CL:0000838,1.25e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;1.53e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.28e-13!115;UBERON:0001049!8.82e-12!57;UBERON:0005068!8.82e-12!57;UBERON:0006241!8.82e-12!57;UBERON:0007135!8.82e-12!57;UBERON:0003080!4.84e-11!42;UBERON:0002780!7.23e-11!41;UBERON:0001890!7.23e-11!41;UBERON:0006240!7.23e-11!41;UBERON:0002390!6.68e-10!102;UBERON:0003061!6.68e-10!102;UBERON:0001017!7.07e-10!82;UBERON:0000073!2.67e-09!94;UBERON:0001016!2.67e-09!94;UBERON:0005743!1.37e-08!86;UBERON:0002020!1.70e-08!34;UBERON:0003528!1.70e-08!34;UBERON:0002616!1.91e-08!59;UBERON:0001893!6.97e-08!34;UBERON:0002791!7.64e-08!33;UBERON:0001474!9.86e-08!86;UBERON:0001869!1.25e-07!32;UBERON:0000955!1.37e-07!69;UBERON:0006238!1.37e-07!69;UBERON:0002371!1.52e-07!80;UBERON:0002193!3.08e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.65e-08;41!UBERON:0001890;6.65e-08;41!UBERON:0003528;2.09e-07;34!UBERON:0002020;2.09e-07;34!UBERON:0002791;2.70e-07;32!UBERON:0001869;5.16e-07;32!UBERON:0000073;9.23e-07;53!UBERON:0002616;9.23e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.57e-12,114;UBERON:0001049,1.34e-11,56;UBERON:0005068,1.34e-11,56;UBERON:0006241,1.34e-11,56;UBERON:0007135,1.34e-11,56;UBERON:0000073,7.19e-11,53;UBERON:0002616,7.19e-11,53;UBERON:0002780,7.23e-11,41;UBERON:0001890,7.23e-11,41;UBERON:0003080,7.23e-11,41;UBERON:0006240,7.23e-11,41;UBERON:0001016,2.11e-10,89;UBERON:0002390,5.01e-10,98;UBERON:0003061,5.01e-10,98;UBERON:0001017,1.06e-09,81;UBERON:0003528,1.70e-08,34;UBERON:0002020,1.70e-08,34;UBERON:0002791,6.88e-08,32;UBERON:0001893,6.97e-08,34;UBERON:0001474,7.67e-08,82;UBERON:0002371,1.15e-07,76;UBERON:0001869,1.25e-07,32;UBERON:0000955,2.00e-07,68;UBERON:0006238,2.00e-07,68;UBERON:0002193,2.77e-07,108 | |||
|phase1_expression=42.6944191285808,36.6111895853581,50.8845398786456,43.0315182918461,41.1204206873105,41.8722491568177,37.9949817252466,16.4247167090976,24.290263422585,12.2866968250754,13.2582221914761,20.315047608106,13.7158828678796,39.1101675353747,37.4479034572545,43.0288093729136,33.7508935693427,35.7851944289813,34.643228714126,26.8403906607398,17.3400587557615,17.2400096812948,71.2727607956331,54.2022723288621,63.1479477161858,91.3140198688018,96.878695550936,103.268545083547,84.5733195225144,195.369163631481,126.020324379286,32.1797428567625,14.7590900201343,32.9081069048441,83.0448390220834,66.8195392690881,63.7112953356618,138.498852132969,182.896536092769,156.464837786129,45.4548412707046,55.0619232232265,63.6211652056441,91.6008904311258,120.920301980419,114.014508758274,131.322405851712,171.457009305101,184.275290682587,103.569261235974,115.528478644624,169.794241060004,158.927758819581,196.872828493067,173.345902840757,105.039225464773,130.994952027766,167.868442880478,107.435446222187,156.93429424021,163.030967078756,98.9553900560148,106.114665854708,96.3267936203889,132.915831291891,174.754649204871,161.310962489854,122.860597310547,153.315978015539,184.393329154644,138.636486103041,208.813419604949,174.370775479927,101.19128214342,81.6400511865767,63.5265695890379,66.8355355321646,68.7810169214099,115.240245661806,64.6978928292634,80.9590876200297,75.2576313510292,49.2789484491704,75.3671283541741,60.4866292627217,97.2944907451636,80.0791974072025,73.5683123141739,66.7655321512711,70.5999778356169,180.440511207695,199.073407196748,202.604810906371,104.41534957743,209.630202555094,61.631875837368,337.16054597511,219.693016376783,221.021611424472,66.5402251654899,129.391139853535,106.05230848458,91.5685623517183,63.3925499676638,122.556057509532,93.7088374088717,135.943539610038,50.9803452508187,62.2984274811817,53.9356327100058,46.1504529702367,72.1609683480281,99.7968570080667,94.9769939718481,86.7644847581307,59.2607862308271,93.1225799452669,88.6558809345185,151.811815211702,53.2004241921242,68.3637626549239,64.6307390224894,102.993381449197,103.157208590461,66.2132850727433,73.6377253856893,55.0155757937101,244.750586274825,217.696319367775,215.064239765957,34.1329612839546,34.2057438448854,32.7328158319438,67.5891214959139,33.0883021019687,37.5152484108533,79.5285947051099,50.1233916411715,62.1093748767926,45.8979852747507,45.7619233461187,40.0795971023001,9.4716774956061,14.4605932685927,37.972045057598,50.6717535540868,43.34429512915,109.944177804763,111.539007602125,137.810732993269,23.8514888840046,27.527507043396,17.7041655819873,27.1347812123525,34.3989537692123,34.1146372005684,29.6772852482271,41.0882647079233,54.7880044537534,82.3412707401089,26.9895642463128,15.9657142200888,28.5552607331358,70.5913114264068,21.0636906449257,58.6699214826404,64.8889886889631,52.3643384247448,30.6633274931766,10.4419222552494,25.648244150257,129.144809087342,104.700671320048,13.5189156164186,49.2002232178365,36.9761094060573,83.4177839123278,82.6089467756584,48.9442367433733,22.4271040056923,19.2148192313469,27.6267654227219,72.8233822835453,50.3817913540633,51.4904994807395,28.9092686801819,32.2658517708799,40.303286275413,30.9038476062017,18.2550982894224,30.4875308325674,87.0189634950298,66.6916530796702,69.2422477042085,50.0177719574489,48.5195553381484,71.6047663548055,51.0841228631283,37.5845732503406,20.9337113245746,7.18618141816238,48.4808008187711,61.8085488167503,82.5651064142865,48.2875382968922,35.5525843126863,34.2542774307041,30.8535538195257,115.885704655005,60.223183646836,52.1352476852522,73.5223185406786,65.8505661833625,91.4623917161984,42.2485263872709,99.2404833578645,66.7443485354211,94.4102315672988,55.3219890840219,75.1654164207475,86.6223405740539,63.7760781780963,33.2338760928556,43.8702136680684,58.0949236858478,59.6553558409128,94.8955433688252,98.0720285578991,105.155518296914,73.3920269508823,60.5570042101508,78.4701322013034,20.3384392028761,32.8052878478371,8.28809528114883,33.8988587463345,26.7095408217747,51.4634580173321,53.6099314448363,51.8173714249486,45.7719986839435,47.0619599239597,51.9622655853302,49.8875840192608,61.0248756539826,66.9460053086719,22.1446636387394,9.81692416624121,13.9935163852676,13.2307840246988,43.0967118394225,58.9696330006576,72.6671585218127,67.1023911110269,72.3172018633508,51.4703430895577,41.924609026095,17.9842805212191,58.5078619435692,44.8128074567283,21.5033481504814,11.4392826380754,34.6395220860656,59.7041585621646,46.728660305857,29.1620224477369,29.6310728049031,37.6703221424505,33.1885847142896,42.0658219426488,40.6258060044206,43.290789050759,32.4015933789428,41.2428869541819,92.3901705093728,66.4925206066792,95.9171778147505,71.4959488744346,18.7857512790953,764.613345214504,84.1743029166441,127.299462942034,114.863602873318,123.465099891,66.1648058524401,14.8975485967728,16.4104426094066,17.1072446022705,45.141269296759,38.7442544618654,48.5904935471983,28.4812954237216,24.4137638546637,61.3108069463142,40.33277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9053,109.268529043847,57.4808199372465,76.6213230258513,105.201303016268,74.7996251983562,47.0053801538356,73.5244063301062,115.605513415435,82.5226835140869,75.6699263174478,49.9480007690085,57.9447867788178,41.3539497232284,62.7660546989218,59.2002742623778,57.765973993248,197.561531549038,95.6917780544189,55.7207244901818,61.2972679390273,55.0790375236138,86.1072757906526,170.51936199358,122.804124866118,24.2718517327247,79.5066066626921,79.391980992353,101.379511661828,98.538982325024,114.141810907713,43.7297011092791,26.6120149844674,52.8916354137238,99.4987227528416,52.6037829971909,357.642565049283,64.6809926742306,60.9877352020632,72.3914060993946,70.6709317275896,58.8479657857202,182.10759896633,113.457437290942,68.3200880976331,74.133756325909,99.7056811270044,158.381619652256,127.677322502062,65.9132689739568,27.5056443831398,78.8057072991982,72.0201495093524,90.4994883971314,48.4075816198681,71.0086230081948,70.7548373109633,78.1268525031209,83.1458118131032,20.0909852648874,26.7908662272393,29.0662750497374,88.6003417562407,55.6587290680518,62.1916279516789,42.8319705946075,50.8536250862946,34.4517911171775,154.880981721138,91.2404952024561,49.4440961485712,131.800409173218,88.847127256322,312.207749927937,89.061396899647,48.6242701375712,54.7384220357306,87.3252930391024,197.247448650986,126.756148185087,90.2483618481721,119.781120514513,135.411396483149,121.559870497681,209.998158652176,245.272792452946,127.444367459217,174.889804685472,117.917581783674,52.5956532913518,139.455424015721,53.4916146077816,57.3233664307429,44.8180573665599,40.2304551683874,100.69200474848,53.910622643227,38.9555035534741,61.2328871799728,64.3574799343031,50.3811994031737,49.5588766452573,40.9313161934407,44.1661332006063,36.1441907794141,48.0300949800792,47.4615031466725,57.3468361789329,58.024601469105,49.2183573297742,41.0559145762447,61.9411194920128,44.8700753158091,43.1239337822017,43.4117941872427,80.1535344413183,50.9176245767166,56.8201846754764,44.0832071884569,53.7429449743132,44.8031096422732,37.0867361597416,37.0424437642511,103.471616547494,35.6346686253511,55.7548137574807,57.1577499403813,53.9560102719208,56.0284387863678,62.1631229446428,42.981321859557,25.6305201143607,50.6546154526813,50.8864740324137,39.1615497689957,45.2765740950235,47.917163975946,53.1962726266046,48.9214529445585,123.464783483496,127.243781672121,57.5304758556862,68.6974655874546,53.4004053619653,35.6370717692893,68.4651279681952,51.5967481305719,42.4633084182681,55.6254384304435,114.070706666934,49.8927125182488,36.0889129916167,46.03371724244,101.420236443796,123.135934615011,52.9986224054371,115.980635759919,39.8871445391959,126.2695025404,103.982106213303,108.377114086809,48.3366612993196,188.795017533001,70.4502258491213,46.2005486234796,45.6305761256268,74.8270472373754,269.223495018611,133.453906171778,86.9693384380801,122.758916059977,57.7463058076219,107.865731282077,97.083205776225,107.471751758623,71.8435615187739,70.8034390293681,65.7341040395424,45.3844693605929,133.92982565566,80.5610699570913,76.7897452445917,75.8411058325235,42.201756606587,72.0243409823912,50.1142067580896,88.270083471576,76.317470618786,165.588556906136,150.467987852862,62.591404661386,114.317735084808,48.246683483432,85.3483226829586,259.234214186081,51.3604959111173,258.208284893334,205.133070553483,157.811057101524,186.910659099415,80.6304544778387,118.806241170008,77.1696042468383,99.1678404131975,43.7388944192946,59.451501964636,71.6330228184925,89.796098220988,144.074995952974,72.8707624615851,134.234331914896,77.7339328387037,106.538626398812,52.6782130581957,93.7020717575069,77.997996422012,159.77575224607,106.627611509124,69.4174149946173,66.9216430208284,117.514142508396,31.8368245527005,60.9409803762411,65.9551752835881,90.1814416906679,71.7104498542877,51.1840536346128,47.7769469488717,63.3101743975504,86.4703558150291,68.1521200650886,106.825758136003,77.715744790179,49.8720205475426,107.827840459129,76.7321440155707,84.7530302187429,61.6006070227805,122.433552930233,209.436684400042,96.3142941955377,64.5175961782417,86.768145520071,68.1960079724208,85.3116159703591,61.747255340626,265.016430605176,173.772144191345,57.058523223759,63.5527408932435,79.6983624469158,69.6789768994369,79.7530424280933,58.0300300468387,35.6423820432849,69.4087821861305,94.9437304720472,59.6348068425903,110.084799860315,79.9901820319446,41.9507494477944,81.5975790936506,81.9991602798871,46.4993772708439,42.9823334627219,51.0499343306071,68.5083686854479,78.234149526006,85.1413926796857,57.9296552934456,166.74366088571,191.049496132943,100.032308177658,68.1250496981972,65.9191760184199,162.517210133921,131.980502719778,81.0289131223727,86.8935174842652,73.825123942555,127.253164306509,47.6560415967607,68.1661065159146,92.5696725428644,76.2008617639365,120.123888680934,52.8040095634366,83.6998136932533,71.1893163008469,101.265666152052,68.7324107452488,158.319271475291,49.6733367649425,63.3530544489327,79.8236630514118,88.2964706945152,133.817111611288,65.4139829170835,52.8938012300334 | |||
|short_description=p1@RSRC2 | |||
}} |
Revision as of 16:27, 11 January 2014
Short description: | p1@RSRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RSRC2_5end |
Coexpression cluster: | C2194_Mast_CD4_cord_embryonic_hepatoblastoma_cerebellum_lung |
Association with transcript: | 0bp_to_ENST00000344591, ENST00000433877, ENST00000525335, ENST00000525387, ENST00000525570, ENST00000526560, ENST00000527461, ENST00000528279_5end |
EntrezGene: | RSRC2 |
HGNC: | 30559 |
UniProt: | E1B6W4E9PI52F5GYD2F5H1Z2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.35e-23 | 168 |
leukocyte | 1.42e-22 | 136 |
hematopoietic cell | 3.96e-21 | 177 |
hematopoietic oligopotent progenitor cell | 5.85e-21 | 161 |
hematopoietic multipotent progenitor cell | 5.85e-21 | 161 |
hematopoietic lineage restricted progenitor cell | 1.24e-18 | 120 |
nongranular leukocyte | 1.08e-16 | 115 |
classical monocyte | 2.10e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.10e-15 | 42 |
myeloid cell | 3.28e-13 | 108 |
common myeloid progenitor | 3.28e-13 | 108 |
myeloid leukocyte | 3.45e-12 | 72 |
defensive cell | 7.11e-11 | 48 |
phagocyte | 7.11e-11 | 48 |
myeloid lineage restricted progenitor cell | 7.75e-11 | 66 |
granulocyte monocyte progenitor cell | 3.58e-10 | 67 |
macrophage dendritic cell progenitor | 3.52e-09 | 61 |
monopoietic cell | 1.88e-08 | 59 |
monocyte | 1.88e-08 | 59 |
monoblast | 1.88e-08 | 59 |
promonocyte | 1.88e-08 | 59 |
lymphocyte | 8.19e-08 | 53 |
common lymphoid progenitor | 8.19e-08 | 53 |
lymphoid lineage restricted progenitor cell | 1.25e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.57e-12 | 114 |
neural tube | 1.34e-11 | 56 |
neural rod | 1.34e-11 | 56 |
future spinal cord | 1.34e-11 | 56 |
neural keel | 1.34e-11 | 56 |
regional part of nervous system | 7.19e-11 | 53 |
regional part of brain | 7.19e-11 | 53 |
regional part of forebrain | 7.23e-11 | 41 |
forebrain | 7.23e-11 | 41 |
anterior neural tube | 7.23e-11 | 41 |
future forebrain | 7.23e-11 | 41 |
nervous system | 2.11e-10 | 89 |
hematopoietic system | 5.01e-10 | 98 |
blood island | 5.01e-10 | 98 |
central nervous system | 1.06e-09 | 81 |
brain grey matter | 1.70e-08 | 34 |
gray matter | 1.70e-08 | 34 |
regional part of telencephalon | 6.88e-08 | 32 |
telencephalon | 6.97e-08 | 34 |
bone element | 7.67e-08 | 82 |
bone marrow | 1.15e-07 | 76 |
cerebral hemisphere | 1.25e-07 | 32 |
brain | 2.00e-07 | 68 |
future brain | 2.00e-07 | 68 |
hemolymphoid system | 2.77e-07 | 108 |