FFCP PHASE1:Hg19::chr12:120662037..120662074,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5829 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9718 | |||
|TSSclassifier=strong | |||
|UniProt=P49023 | |||
|association_with_transcript=105bp_to_ENST00000538144,uc001txv.2_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_4_at_PXN_5end | |||
|id=chr12:120662037..120662074,- | |||
|ontology_enrichment_celltype=CL:0000220!1.82e-12!246;CL:0002321!1.89e-12!248;CL:0000222!5.30e-10!119;CL:0000066!6.36e-10!254;CL:0000213!9.59e-09!57;CL:0000215!9.59e-09!57;CL:0000076!3.87e-08!62;CL:0000115!6.19e-08!35;CL:0002076!4.27e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000115;6.57e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.98e-11,250;CL:0000222,4.42e-10,121;CL:0000213,2.54e-09,58;CL:0000215,2.54e-09,58;CL:0000115,5.84e-09,36;CL:0000076,1.02e-07,63;CL:0002078,2.60e-07,45;CL:0000066,2.91e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.20e-09!448;UBERON:0004120!3.20e-09!448;UBERON:0006603!3.20e-09!448;UBERON:0000468!9.29e-09!659;UBERON:0003102!1.48e-07!95;UBERON:0004872!1.86e-07!84;UBERON:0000055!1.93e-07!69;UBERON:0000467!2.51e-07!625;UBERON:0000480!3.73e-07!626;UBERON:0003914!5.13e-07!118;UBERON:0000161!6.83e-07!35;UBERON:0002049!6.99e-07!79;UBERON:0007798!6.99e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,4.81e-12,315;UBERON:0004120,4.81e-12,315;UBERON:0006603,4.81e-12,315;UBERON:0000055,4.34e-08,68;UBERON:0004872,7.75e-08,83;UBERON:0002049,2.60e-07,78;UBERON:0007798,2.60e-07,78;UBERON:0007500,3.60e-07,59;UBERON:0001981,3.60e-07,59;UBERON:0004537,3.60e-07,59;UBERON:0006965,3.60e-07,59;UBERON:0003081,4.05e-07,203;UBERON:0000490,8.41e-07,148 | |||
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| |||
|short_description=p4@PXN | |||
}} |
Revision as of 16:14, 11 January 2014
Short description: | p4@PXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PXN_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 105bp_to_ENST00000538144, uc001txv.2_5end |
EntrezGene: | PXN |
HGNC: | 9718 |
UniProt: | P49023 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.98e-11 | 250 |
mesodermal cell | 4.42e-10 | 121 |
lining cell | 2.54e-09 | 58 |
barrier cell | 2.54e-09 | 58 |
endothelial cell | 5.84e-09 | 36 |
squamous epithelial cell | 1.02e-07 | 63 |
meso-epithelial cell | 2.60e-07 | 45 |
epithelial cell | 2.91e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 4.81e-12 | 315 |
mesoderm-derived structure | 4.81e-12 | 315 |
presumptive mesoderm | 4.81e-12 | 315 |
vessel | 4.34e-08 | 68 |
splanchnic layer of lateral plate mesoderm | 7.75e-08 | 83 |
vasculature | 2.60e-07 | 78 |
vascular system | 2.60e-07 | 78 |
epithelial tube open at both ends | 3.60e-07 | 59 |
blood vessel | 3.60e-07 | 59 |
blood vasculature | 3.60e-07 | 59 |
vascular cord | 3.60e-07 | 59 |
lateral plate mesoderm | 4.05e-07 | 203 |
unilaminar epithelium | 8.41e-07 | 148 |