FFCP PHASE1:Hg19::chr12:111051977..111051991,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79600 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26113 | |||
|TSSclassifier=strong | |||
|UniProt=E9PNE4 | |||
|association_with_transcript=4bp_to_ENST00000480648_5end | |||
|description=CAGE_peak_3_at_TCTN1_5end | |||
|id=chr12:111051977..111051991,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.11e-07;82 | |||
|ontology_enrichment_disease=DOID:0050687!8.83e-09!143;DOID:305!6.12e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.75e-19!365;UBERON:0000073!6.68e-19!94;UBERON:0001016!6.68e-19!94;UBERON:0005743!1.19e-16!86;UBERON:0000955!1.38e-16!69;UBERON:0006238!1.38e-16!69;UBERON:0001017!1.71e-16!82;UBERON:0001049!2.93e-15!57;UBERON:0005068!2.93e-15!57;UBERON:0006241!2.93e-15!57;UBERON:0007135!2.93e-15!57;UBERON:0004121!6.35e-15!169;UBERON:0000481!1.90e-14!347;UBERON:0003075!2.08e-14!86;UBERON:0007284!2.08e-14!86;UBERON:0000924!3.89e-14!173;UBERON:0006601!3.89e-14!173;UBERON:0002616!5.56e-14!59;UBERON:0002346!3.35e-13!90;UBERON:0000033!1.12e-12!123;UBERON:0000153!3.22e-12!129;UBERON:0007811!3.22e-12!129;UBERON:0000477!1.42e-10!286;UBERON:0000483!1.79e-10!309;UBERON:0000025!3.10e-10!194;UBERON:0003080!3.10e-10!42;UBERON:0000119!3.22e-10!312;UBERON:0002780!5.95e-10!41;UBERON:0001890!5.95e-10!41;UBERON:0006240!5.95e-10!41;UBERON:0003056!1.03e-09!61;UBERON:0000062!6.37e-09!511;UBERON:0000468!1.99e-08!659;UBERON:0004111!2.06e-08!241;UBERON:0000064!2.33e-08!219;UBERON:0002020!3.14e-07!34;UBERON:0003528!3.14e-07!34;UBERON:0001893!4.20e-07!34;UBERON:0007023!6.79e-07!115;UBERON:0002791!8.05e-07!33;UBERON:0000467!9.47e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.03e-09;53!UBERON:0002616;1.03e-09;53!UBERON:0002780;2.58e-08;41!UBERON:0001890;2.58e-08;41!UBERON:0000955;2.60e-07;68!UBERON:0001016;3.14e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.37e-17,89;UBERON:0001049,1.57e-15,56;UBERON:0005068,1.57e-15,56;UBERON:0006241,1.57e-15,56;UBERON:0007135,1.57e-15,56;UBERON:0001017,2.60e-15,81;UBERON:0000955,3.03e-15,68;UBERON:0006238,3.03e-15,68;UBERON:0003075,3.24e-14,82;UBERON:0007284,3.24e-14,82;UBERON:0000073,1.23e-13,53;UBERON:0002616,1.23e-13,53;UBERON:0002346,9.97e-13,86;UBERON:0010371,1.06e-12,104;UBERON:0011216,4.43e-12,223;UBERON:0010314,5.69e-11,132;UBERON:0004121,9.49e-11,171;UBERON:0000924,9.49e-11,171;UBERON:0006601,9.49e-11,171;UBERON:0002780,3.98e-10,41;UBERON:0001890,3.98e-10,41;UBERON:0003080,3.98e-10,41;UBERON:0006240,3.98e-10,41;UBERON:0003056,2.19e-09,61;UBERON:0000025,3.82e-07,192;UBERON:0003076,5.48e-07,15;UBERON:0003057,5.48e-07,15 | |||
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| |||
|short_description=p3@TCTN1 | |||
}} |
Revision as of 15:53, 11 January 2014
Short description: | p3@TCTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TCTN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000480648_5end |
EntrezGene: | TCTN1 |
HGNC: | 26113 |
UniProt: | E9PNE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.37e-17 | 89 |
neural tube | 1.57e-15 | 56 |
neural rod | 1.57e-15 | 56 |
future spinal cord | 1.57e-15 | 56 |
neural keel | 1.57e-15 | 56 |
central nervous system | 2.60e-15 | 81 |
brain | 3.03e-15 | 68 |
future brain | 3.03e-15 | 68 |
neural plate | 3.24e-14 | 82 |
presumptive neural plate | 3.24e-14 | 82 |
regional part of nervous system | 1.23e-13 | 53 |
regional part of brain | 1.23e-13 | 53 |
neurectoderm | 9.97e-13 | 86 |
ecto-epithelium | 1.06e-12 | 104 |
organ system subdivision | 4.43e-12 | 223 |
structure with developmental contribution from neural crest | 5.69e-11 | 132 |
ectoderm-derived structure | 9.49e-11 | 171 |
ectoderm | 9.49e-11 | 171 |
presumptive ectoderm | 9.49e-11 | 171 |
regional part of forebrain | 3.98e-10 | 41 |
forebrain | 3.98e-10 | 41 |
anterior neural tube | 3.98e-10 | 41 |
future forebrain | 3.98e-10 | 41 |
pre-chordal neural plate | 2.19e-09 | 61 |
tube | 3.82e-07 | 192 |
posterior neural tube | 5.48e-07 | 15 |
chordal neural plate | 5.48e-07 | 15 |