FFCP PHASE1:Hg19::chr12:109915422..109915457,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89910 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13478 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z3V4,F5H5T5 | |||
|association_with_transcript=0bp_to_ENST00000280774,ENST00000340074,ENST00000342494,ENST00000449510,ENST00000536398,ENST00000539599,ENST00000539843,ENST00000540230,NM_130466,NM_183415,uc001tol.1,uc001tom.2,uc001ton.2,uc001too.1,uc001top.2,uc001toq.2,uc001tor.2,uc009zvj.1_5end | |||
|description=CAGE_peak_1_at_UBE3B_5end | |||
|id=chr12:109915422..109915457,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.66e-20!115;UBERON:0004111!4.52e-09!241;UBERON:0001049!3.75e-08!57;UBERON:0005068!3.75e-08!57;UBERON:0006241!3.75e-08!57;UBERON:0007135!3.75e-08!57;UBERON:0000475!3.98e-08!365;UBERON:0002616!6.08e-08!59;UBERON:0002780!6.35e-08!41;UBERON:0001890!6.35e-08!41;UBERON:0006240!6.35e-08!41;UBERON:0000153!1.14e-07!129;UBERON:0007811!1.14e-07!129;UBERON:0001893!1.18e-07!34;UBERON:0003075!1.30e-07!86;UBERON:0007284!1.30e-07!86;UBERON:0003056!1.54e-07!61;UBERON:0000033!2.40e-07!123;UBERON:0003080!2.89e-07!42;UBERON:0002791!3.47e-07!33;UBERON:0000064!4.32e-07!219;UBERON:0000483!5.33e-07!309;UBERON:0000477!7.35e-07!286;UBERON:0000119!7.84e-07!312;UBERON:0001869!9.27e-07!32 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.16e-19,114;UBERON:0010371,2.70e-10,104;UBERON:0004111,1.36e-09,240;UBERON:0000073,2.68e-09,53;UBERON:0002616,2.68e-09,53;UBERON:0003075,2.78e-09,82;UBERON:0007284,2.78e-09,82;UBERON:0001049,9.53e-09,56;UBERON:0005068,9.53e-09,56;UBERON:0006241,9.53e-09,56;UBERON:0007135,9.53e-09,56;UBERON:0002346,4.80e-08,86;UBERON:0000483,5.58e-08,306;UBERON:0002780,6.35e-08,41;UBERON:0001890,6.35e-08,41;UBERON:0003080,6.35e-08,41;UBERON:0006240,6.35e-08,41;UBERON:0003056,8.46e-08,61;UBERON:0000119,8.53e-08,309;UBERON:0001893,1.18e-07,34;UBERON:0000025,7.00e-07,192;UBERON:0000955,7.36e-07,68;UBERON:0006238,7.36e-07,68;UBERON:0001869,9.27e-07,32 | |||
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| |||
|short_description=p1@UBE3B | |||
}} |
Revision as of 15:49, 11 January 2014
Short description: | p1@UBE3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBE3B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000280774, ENST00000340074, ENST00000342494, ENST00000449510, ENST00000536398, ENST00000539599, ENST00000539843, ENST00000540230, NM_130466, NM_183415, uc001tol.1, uc001tom.2, uc001ton.2, uc001too.1, uc001top.2, uc001toq.2, uc001tor.2, uc009zvj.1_5end |
EntrezGene: | UBE3B |
HGNC: | 13478 |
UniProt: | Q7Z3V4F5H5T5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.16e-19 | 114 |
ecto-epithelium | 2.70e-10 | 104 |
anatomical conduit | 1.36e-09 | 240 |
regional part of nervous system | 2.68e-09 | 53 |
regional part of brain | 2.68e-09 | 53 |
neural plate | 2.78e-09 | 82 |
presumptive neural plate | 2.78e-09 | 82 |
neural tube | 9.53e-09 | 56 |
neural rod | 9.53e-09 | 56 |
future spinal cord | 9.53e-09 | 56 |
neural keel | 9.53e-09 | 56 |
neurectoderm | 4.80e-08 | 86 |
epithelium | 5.58e-08 | 306 |
regional part of forebrain | 6.35e-08 | 41 |
forebrain | 6.35e-08 | 41 |
anterior neural tube | 6.35e-08 | 41 |
future forebrain | 6.35e-08 | 41 |
pre-chordal neural plate | 8.46e-08 | 61 |
cell layer | 8.53e-08 | 309 |
telencephalon | 1.18e-07 | 34 |
tube | 7.00e-07 | 192 |
brain | 7.36e-07 | 68 |
future brain | 7.36e-07 | 68 |
cerebral hemisphere | 9.27e-07 | 32 |