FFCP PHASE1:Hg19::chr12:104324540..104324559,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:104324540..104324559,+ | |||
|id=chr12:104324540..104324559,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.38e-32!140;CL:0000988!1.67e-30!182;CL:0000037!3.07e-29!172;CL:0000566!3.07e-29!172;CL:0002031!5.53e-25!124;CL:0002032!6.06e-25!165;CL:0000837!6.06e-25!165;CL:0002087!3.86e-22!119;CL:0000542!3.27e-17!53;CL:0000051!3.27e-17!53;CL:0000838!2.81e-16!52;CL:0000557!3.34e-11!71;CL:0000766!8.94e-11!76;CL:0000134!1.41e-10!358;CL:0002320!5.27e-10!365;CL:0000763!7.26e-10!112;CL:0000049!7.26e-10!112;CL:0002057!3.44e-09!42;CL:0000219!6.84e-09!390;CL:0000080!1.15e-08!6;CL:0000084!1.79e-08!25;CL:0000827!1.79e-08!25;CL:0000839!2.86e-08!70;CL:0000860!2.88e-08!45;CL:0000624!3.46e-08!6;CL:0002009!1.97e-07!65;CL:0000791!2.59e-07!18;CL:0000789!2.59e-07!18;CL:0002420!2.59e-07!18;CL:0002419!2.59e-07!18;CL:0000790!2.59e-07!18;CL:0000784!4.82e-07!3;CL:0002274!6.56e-07!5;CL:0000457!6.56e-07!5;CL:0002191!6.56e-07!5;CL:0000097!6.56e-07!5;CL:0000831!6.56e-07!5;CL:0002028!6.56e-07!5;CL:0000623!7.19e-07!3;CL:0000825!7.19e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.03e-17;5!CL:0000784;9.95e-17;3!CL:0000623;2.31e-16;3!CL:0000624;7.17e-14;6!CL:0000791;2.35e-13;18!CL:0000789;2.35e-13;18!CL:0002419;2.35e-13;18!CL:0000451;3.30e-12;10!CL:0001014;3.44e-12;2!CL:0001016;3.44e-12;2!CL:0000084;4.12e-12;25!CL:0000542;5.90e-11;53!CL:0000163;1.46e-09;9!CL:0000840;7.87e-09;5!CL:0002393;4.57e-08;6!CL:0002397;4.57e-08;6!CL:0000226;1.85e-07;3!CL:0000842;1.85e-07;3!CL:0000738;3.85e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.92e-30,136;CL:0000988,4.93e-29,177;CL:0000037,9.02e-25,168;CL:0002031,2.80e-23,120;CL:0002032,5.51e-19,161;CL:0000837,5.51e-19,161;CL:0000097,4.11e-17,5;CL:0002028,4.11e-17,5;CL:0000784,9.44e-17,3;CL:0000838,1.51e-16,52;CL:0002087,2.09e-16,115;CL:0000623,2.85e-16,3;CL:0000825,2.85e-16,3;CL:0000542,3.52e-16,53;CL:0000051,3.52e-16,53;CL:0000624,7.42e-14,6;CL:0000791,2.54e-13,18;CL:0000789,2.54e-13,18;CL:0002420,2.54e-13,18;CL:0002419,2.54e-13,18;CL:0000790,2.54e-13,18;CL:0000451,3.19e-12,10;CL:0001014,3.35e-12,2;CL:0001016,3.35e-12,2;CL:0000084,4.22e-12,25;CL:0000827,4.22e-12,25;CL:0000557,4.22e-10,67;CL:0000163,1.47e-09,9;CL:0000134,3.70e-09,354;CL:0002320,7.53e-09,361;CL:0000840,7.57e-09,5;CL:0001029,7.57e-09,5;CL:0000219,9.16e-08,386;CL:0000226,1.67e-07,3;CL:0000842,1.67e-07,3;CL:0000034,1.88e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000790;2.35e-13;18!CL:0000051;5.90e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.06e-13!102;UBERON:0003061!5.06e-13!102;UBERON:0001474!2.16e-11!86;UBERON:0002193!5.53e-11!112;UBERON:0002371!6.52e-11!80;UBERON:0002384!1.01e-09!375;UBERON:0004765!3.31e-09!101;UBERON:0001434!3.31e-09!101;UBERON:0002405!3.21e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.24e-08;15!UBERON:0000179;1.24e-08;15!UBERON:0000463;1.24e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.42e-14,98;UBERON:0003061,1.42e-14,98;UBERON:0002193,7.46e-13,108;UBERON:0000178,1.18e-08,15;UBERON:0000179,1.18e-08,15;UBERON:0000463,1.18e-08,15;UBERON:0002371,1.28e-08,76;UBERON:0002384,1.98e-08,371;UBERON:0001474,8.21e-08,82;UBERON:0002405,9.56e-08,93;UBERON:0004765,6.63e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,1.57345710739562,0.767658796194425,0.619264493264304,0,0,0,0,0.142169232487422,0.293600439334847,2.76997704265939,1.80490002723128,2.17010870715852,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0.619412741790207,0,0,0.709446689665756,0.689491361473237,1.29096936716765,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,1.13477044938228,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0.949387162322653,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70763890732835,7.6340834618222,3.82273228125229,13.2171328579026,3.92355994087075,0,3.93419540227666,2.35806457649499,4.31763147898969,0,0,0.946895611469467,0,0,0.589211814949674,0.221533894583621,0,0,0,0,0,0,0.593146252648242,0.535081656179426,0,0,1.14966148080576,1.37450978193052,0.253019692019503,0,0.651083453856419,0,0,0,0,0,0,7.25784275609037,4.01160293675261,5.06885413589796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96226560763355,9.72391348326217,3.71457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38994856843915,0,5.1832028885193,2.45003920808834,3.53478813593864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15249216323084,3.45004119775228,4.87703537863044,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2942852049117,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0.246169610922139,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0.167821586975843,0,0,0,0.489698424477443,0,0,0,0,0,26.0938593238947,14.4569808567408,11.7996802941165,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0.788662062837943,0,0,0,0,0,0,0,0,2.32991899054908,0,0,0,0,0.0846733320657845,0,0,0,0,0,18.897806890326,13.9284351820431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99981093782395,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0.569822880276821,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr12:104324540..104324559,+ | |||
}} |
Revision as of 15:34, 11 January 2014
Short description: | p@chr12:104324540..104324559, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:104324540..104324559, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.42e-14 | 98 |
blood island | 1.42e-14 | 98 |
hemolymphoid system | 7.46e-13 | 108 |
blood | 1.18e-08 | 15 |
haemolymphatic fluid | 1.18e-08 | 15 |
organism substance | 1.18e-08 | 15 |
bone marrow | 1.28e-08 | 76 |
connective tissue | 1.98e-08 | 371 |
bone element | 8.21e-08 | 82 |
immune system | 9.56e-08 | 93 |
skeletal element | 6.63e-07 | 90 |