FFCP PHASE1:Hg19::chr12:104322982..104322991,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_at_chr12:104322982..104322991,+ | |||
|id=chr12:104322982..104322991,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.82e-44!52;CL:0000542!2.58e-43!53;CL:0000051!2.58e-43!53;CL:0000738!2.60e-27!140;CL:0002087!2.07e-25!119;CL:0000037!4.23e-22!172;CL:0000566!4.23e-22!172;CL:0002031!1.13e-20!124;CL:0000988!2.05e-20!182;CL:0000084!4.33e-20!25;CL:0000827!4.33e-20!25;CL:0000945!3.82e-17!24;CL:0000826!3.82e-17!24;CL:0000624!9.08e-17!6;CL:0000791!1.22e-16!18;CL:0000789!1.22e-16!18;CL:0002420!1.22e-16!18;CL:0002419!1.22e-16!18;CL:0000790!1.22e-16!18;CL:0002032!3.40e-16!165;CL:0000837!3.40e-16!165;CL:0000236!2.56e-13!14;CL:0000784!4.21e-13!3;CL:0000623!1.09e-12!3;CL:0000825!1.09e-12!3;CL:0000842!6.44e-12!3;CL:0000224!4.73e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.48e-33;3!CL:0000791;8.98e-22;18!CL:0000789;8.98e-22;18!CL:0002419;8.98e-22;18!CL:0000236;1.87e-21;13!CL:0000542;5.15e-19;53!CL:0000624;3.13e-17;6!CL:0000623;1.32e-15;3!CL:0000084;1.36e-15;25!CL:0000945;1.33e-11;24!CL:0000625;1.16e-09;11!CL:0000451;1.30e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.15e-34,52;CL:0000784,1.18e-33,3;CL:0000542,1.96e-33,53;CL:0000051,1.96e-33,53;CL:0000791,9.32e-22,18;CL:0000789,9.32e-22,18;CL:0002420,9.32e-22,18;CL:0002419,9.32e-22,18;CL:0000790,9.32e-22,18;CL:0000236,5.88e-20,14;CL:0000738,1.43e-18,136;CL:0000624,3.31e-17,6;CL:0002087,8.81e-17,115;CL:0002031,5.24e-16,120;CL:0000084,1.39e-15,25;CL:0000827,1.39e-15,25;CL:0000623,1.77e-15,3;CL:0000825,1.77e-15,3;CL:0000037,1.19e-14,168;CL:0000988,8.47e-14,177;CL:0000945,1.27e-11,24;CL:0000826,1.27e-11,24;CL:0002032,1.88e-11,161;CL:0000837,1.88e-11,161;CL:0000625,1.16e-09,11;CL:0000451,1.23e-09,10 | |||
|ontology_enrichment_development_v019=CL:0000790;8.98e-22;18!CL:0000051;5.15e-19;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.08e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,1.32208974556972,1.90810750907073,8.53819453664173,9.39579502993502,6.49864487812889,0,0,0.263384084775077,3.540775862049,1.17903228824749,2.87842098599313,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0,0.812411591295047,0.25618263945135,0.130059347559878,0,0,0,0.889719378972363,0.535081656179426,3.1360657141493,0,0.766440987203842,1.71813722741315,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,2.21767417547206,1.60464117470104,3.62061009706997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38490624305342,1.71598473234038,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,1.2937654491571,2.18183161675572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31037357147929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:104322982..104322991,+ | |||
}} |
Revision as of 15:33, 11 January 2014
Short description: | p@chr12:104322982..104322991, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:104322982..104322991, + |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.15e-34 | 52 |
plasmacytoid dendritic cell | 1.18e-33 | 3 |
lymphocyte | 1.96e-33 | 53 |
common lymphoid progenitor | 1.96e-33 | 53 |
mature alpha-beta T cell | 9.32e-22 | 18 |
alpha-beta T cell | 9.32e-22 | 18 |
immature T cell | 9.32e-22 | 18 |
mature T cell | 9.32e-22 | 18 |
immature alpha-beta T cell | 9.32e-22 | 18 |
B cell | 5.88e-20 | 14 |
leukocyte | 1.43e-18 | 136 |
CD4-positive, alpha-beta T cell | 3.31e-17 | 6 |
nongranular leukocyte | 8.81e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 5.24e-16 | 120 |
T cell | 1.39e-15 | 25 |
pro-T cell | 1.39e-15 | 25 |
natural killer cell | 1.77e-15 | 3 |
pro-NK cell | 1.77e-15 | 3 |
hematopoietic stem cell | 1.19e-14 | 168 |
hematopoietic cell | 8.47e-14 | 177 |
lymphocyte of B lineage | 1.27e-11 | 24 |
pro-B cell | 1.27e-11 | 24 |
hematopoietic oligopotent progenitor cell | 1.88e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.88e-11 | 161 |
CD8-positive, alpha-beta T cell | 1.16e-09 | 11 |
dendritic cell | 1.23e-09 | 10 |