FFCP PHASE1:Hg19::chr12:97306283..97306292,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121441 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7723 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NHV4 | |||
|association_with_transcript=-61bp_to_ENST00000457368,uc001tex.2_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_3_at_NEDD1_5end | |||
|id=chr12:97306283..97306292,+ | |||
|ontology_enrichment_celltype=CL:1000415!7.61e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008814;4.21e-21;2!UBERON:0010056;4.21e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!3.69e-16!3;UBERON:0001033!3.69e-16!3;UBERON:0010056!3.69e-16!3;UBERON:0002426!7.03e-13!1;UBERON:0003831!7.03e-13!1;UBERON:0003898!7.03e-13!1;UBERON:0004830!7.03e-13!1;UBERON:0001774!7.03e-13!1;UBERON:0003830!7.03e-13!1;UBERON:0005175!7.03e-13!1;UBERON:0003897!7.03e-13!1;UBERON:0001103!7.03e-13!1;UBERON:0010084!7.03e-13!1;UBERON:0000989!1.25e-12!1;UBERON:0008811!1.25e-12!1;UBERON:0006258!1.25e-12!1;UBERON:0005876!1.25e-12!1;UBERON:0004874!1.25e-12!1;UBERON:0002372!4.81e-12!1;UBERON:0001961!4.81e-12!1;UBERON:0001744!4.81e-12!1;UBERON:0001735!4.81e-12!1;UBERON:0001042!1.24e-10!10;UBERON:0009145!1.24e-10!10;UBERON:0006562!1.03e-09!11;UBERON:0008814!2.38e-07!15;UBERON:0001630!4.56e-07!2;UBERON:0005090!4.56e-07!2;UBERON:0000341!5.11e-07!2;UBERON:0002148!9.54e-07!2;UBERON:0009662!9.54e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;4.28e-53;3!UBERON:0001033;4.28e-53;3!UBERON:0002426;6.62e-41;1!UBERON:0003831;6.62e-41;1!UBERON:0003898;6.62e-41;1!UBERON:0004830;6.62e-41;1!UBERON:0003830;6.62e-41;1!UBERON:0005175;6.62e-41;1!UBERON:0001774;6.62e-41;1!UBERON:0001103;6.62e-41;1!UBERON:0005090;3.11e-21;2!UBERON:0001630;3.11e-21;2!UBERON:0000341;4.21e-21;2!UBERON:0001134;5.84e-11;16!UBERON:0002036;5.84e-11;16!UBERON:0000974;6.13e-08;6!UBERON:0000020;6.86e-08;23!UBERON:0001032;1.34e-07;24!UBERON:0004456;1.34e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,3.75e-53,3;UBERON:0001033,3.75e-53,3;UBERON:0010056,3.75e-53,3;UBERON:0002426,6.62e-41,1;UBERON:0003831,6.62e-41,1;UBERON:0003898,6.62e-41,1;UBERON:0004830,6.62e-41,1;UBERON:0003830,6.62e-41,1;UBERON:0005175,6.62e-41,1;UBERON:0001774,6.62e-41,1;UBERON:0001103,6.62e-41,1;UBERON:0010084,6.62e-41,1;UBERON:0005090,3.11e-21,2;UBERON:0001630,3.11e-21,2;UBERON:0000341,4.66e-21,2;UBERON:0001042,8.13e-17,10;UBERON:0009145,8.13e-17,10;UBERON:0006562,2.17e-15,11;UBERON:0008814,8.11e-10,18;UBERON:0001557,2.36e-09,19;UBERON:0000166,3.27e-08,22;UBERON:0000020,1.31e-07,24;UBERON:0001032,1.31e-07,24;UBERON:0004456,1.31e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42062117839031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59319823996865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26467963801962,0,0,0,0,0,0.202117188958219,4.57205170583619,1.02669990325584,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@NEDD1 | |||
}} |
Revision as of 15:22, 11 January 2014
Short description: | p3@NEDD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NEDD1_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | -61bp_to_ENST00000457368, uc001tex.2_5end |
EntrezGene: | NEDD1 |
HGNC: | 7723 |
UniProt: | Q8NHV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 3.75e-53 | 3 |
gustatory system | 3.75e-53 | 3 |
future tongue | 3.75e-53 | 3 |
chest muscle | 6.62e-41 | 1 |
respiratory system muscle | 6.62e-41 | 1 |
skeletal muscle of trunk | 6.62e-41 | 1 |
respiratory system skeletal muscle | 6.62e-41 | 1 |
thoracic segment muscle | 6.62e-41 | 1 |
chest organ | 6.62e-41 | 1 |
muscle of trunk | 6.62e-41 | 1 |
diaphragm | 6.62e-41 | 1 |
future diaphragm | 6.62e-41 | 1 |
muscle structure | 3.11e-21 | 2 |
muscle organ | 3.11e-21 | 2 |
throat | 4.66e-21 | 2 |
chordate pharynx | 8.13e-17 | 10 |
pharyngeal region of foregut | 8.13e-17 | 10 |
pharynx | 2.17e-15 | 11 |
pharyngeal arch system | 8.11e-10 | 18 |
upper respiratory tract | 2.36e-09 | 19 |
oral opening | 3.27e-08 | 22 |
sense organ | 1.31e-07 | 24 |
sensory system | 1.31e-07 | 24 |
entire sense organ system | 1.31e-07 | 24 |