FFCP PHASE1:Hg19::chr12:94656388..94656407,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10154 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9106 | |||
|TSSclassifier=strong | |||
|UniProt=F5H3A2 | |||
|association_with_transcript=91bp_to_ENST00000545312,NR_037687,uc009zsv.2_5end | |||
|description=CAGE_peak_4_at_PLXNC1_5end | |||
|id=chr12:94656388..94656407,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.23e-20!119;CL:0000738!1.45e-20!140;CL:0002031!5.66e-19!124;CL:0000037!2.62e-15!172;CL:0000566!2.62e-15!172;CL:0000988!3.07e-15!182;CL:0002032!7.36e-14!165;CL:0000837!7.36e-14!165;CL:0002057!9.36e-12!42;CL:0000791!1.35e-11!18;CL:0000789!1.35e-11!18;CL:0002420!1.35e-11!18;CL:0002419!1.35e-11!18;CL:0000790!1.35e-11!18;CL:0000542!2.04e-11!53;CL:0000051!2.04e-11!53;CL:0000838!3.11e-11!52;CL:0000860!7.26e-10!45;CL:0000084!1.54e-09!25;CL:0000827!1.54e-09!25;CL:0000839!1.89e-09!70;CL:0000625!2.58e-09!11;CL:0000557!4.85e-09!71;CL:0000766!6.06e-09!76;CL:0002194!8.57e-09!63;CL:0000576!8.57e-09!63;CL:0000040!8.57e-09!63;CL:0000559!8.57e-09!63;CL:0002009!5.53e-08!65 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.84e-22;11!CL:0000791;7.33e-21;18!CL:0000789;7.33e-21;18!CL:0002419;7.33e-21;18!CL:0000084;6.77e-14;25!CL:0000542;5.13e-08;53!CL:0002087;1.08e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.20e-23,11;CL:0000791,9.10e-22,18;CL:0000789,9.10e-22,18;CL:0002420,9.10e-22,18;CL:0002419,9.10e-22,18;CL:0000790,9.10e-22,18;CL:0002087,6.77e-20,115;CL:0000738,4.19e-18,136;CL:0002031,1.14e-17,120;CL:0000838,3.39e-15,52;CL:0000542,8.75e-15,53;CL:0000051,8.75e-15,53;CL:0000084,1.62e-14,25;CL:0000827,1.62e-14,25;CL:0000988,1.25e-12,177;CL:0000037,2.42e-12,168;CL:0002032,3.77e-11,161;CL:0000837,3.77e-11,161;CL:0000860,8.22e-08,42;CL:0002057,8.22e-08,42;CL:0000623,6.35e-07,3;CL:0000825,6.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;7.33e-21;18!CL:0000051;5.13e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.57e-13!102;UBERON:0003061!4.57e-13!102;UBERON:0002193!5.30e-11!112;UBERON:0002371!7.74e-08!80;UBERON:0001474!4.28e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.06e-09,98;UBERON:0003061,5.06e-09,98;UBERON:0002193,1.52e-07,108 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0.410623275218653,0.376627918784408,0.993374274723366,0.738905305049512,0.629686250509434,0,1.91914699048606,0.464448369948228,0.919421224478927,0,0,0.232401601740905,1.27952309238679,0,1.66198622559563,2.60707781711184,1.30206522429511,0.447830948479849,1.29557466407592,1.03030227053675,1.01778767145695,1.13362783106643,1.21292030593908,1.16214518452842,0.411167888021826,0.619412741790207,1.43846196161075,1.0246428261164,2.12834006899727,0.689491361473237,0.645484683583826,0,0.188242339542605,0.272906150057846,0.898893937780338,0.612167784741805,0.641858054152187,1.91801137739712,0.659702600373432,0.797854630486527,0,0.290209238628584,0.56738522469114,1.86846674698672,1.00499466102697,2.08593167368081,0.65156653411535,0,1.47311054395026,0.632924774881769,1.47878700418359,0.637812899895131,0.838634582033504,0.561643155732475,0.901061357049038,0.32145117339416,0.285012743741249,0.99458338599545,0.365328307529268,0,1.09227722252426,0.889509253863555,1.28019066769952,0.400395987036012,0.574752439954483,0,0,0,1.17447437874188,0.764546456250458,0,0,0.263384084775077,0.983548850569165,1.96505381374582,0.205601498999509,0.501559486172034,3.91106719960308,2.36723902867367,1.94826728407911,0.557052284425868,0.589211814949674,1.99380505125259,1.62482318259009,0,0.130059347559878,0.493313713811028,0,0.869409257205157,2.52087157375503,4.81573490561484,3.1360657141493,0.566546713487831,2.29932296161153,2.40539211837841,2.78321661221453,3.18565414324097,1.95325036156926,2.85135613334512,3.76437797694432,3.96758494578697,6.24653632761729,1.89421801635213,3.28451198768419,1.61285394579786,2.67440195783507,2.75166367377318,0,0.670700859703636,0.895037932904712,0,0.50133791063589,0.724232594804119,0,0,0.850813354476611,0.221729397462564,0.087834785693126,0.589405839739707,0,0,0.649094787309367,0.348259474598534,0.398873881556595,0,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.886413581652058,0.132409180813219,1.14734648299525,0.709336764396714,0.560677600142307,0,0,0.933633106199299,1.48181739276657,0.653847612453835,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0.245668634623536,0,0,0.494533858557114,0,0.718618141816238,0.168336113954066,0,0,0.877955241761676,0,0.150238058906597,0.340296549480063,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,0,0,0.168776332241266,0.194874010322397,0,0.552299391853796,0.323292113637624,0,0,0.169560592310488,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0.882926198829301,0,0.171567810298526,0,0,0.100528972411631,0,0.325808305310325,0,0,0.695582429850461,0.234817388471643,0,0,0,0,0,0,0.234004265139238,0.891786973732369,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0,0.985326475791887,0.880484340132261,1.86595303986695,0.864719720501769,0.37872730027914,0.317489471460845,0.381988425558278,1.17217447210047,0,0.205654985406647,0,0.285826432630578,0,0,0.1466765716419,0.517086863031111,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,1.00084595560703,0,0,0,0.710783897485092,0.791951872933429,0,0,0.499864955910285,0,0,0,0,1.14861935834114,0,0.579125226670317,1.02738161275192,0.537182889719687,0.672510863961164,1.37921532141349,1.72502059887614,2.43851768931522,0.76228387266739,0,0,0.167516265334349,0.637938751653163,0,0,0.414415513436035,0.12269149171914,0,0,0.415941723061614,0,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.82707210449155,1.07857100409308,1.06727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.532685175939381,0.164254312027618,0,0.116210378459959,0,0.200506470303285,0,0.803701137152247,0.364182336013434,0.917870904715969,0,0.0770153371044148,0,0,0.316654886678627,0,0,0.215915916102139,0,0.270946437543853,1.50506932156456,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.618246069886334,0.366277859273374,0.247528499761764,0,0,0,0.193341436584244,0.154048617114644,0.460511024178389,0.275673144969061,0.859361958946189,0,0.511359764496605,0.0890320356467374,0.165284915360978,0.960950336825531,1.53135254993501,0.10115778085555,0,0,0,0.616067160352178,0,0,0.18532421910392,0.572499546967965,0,0,0.38126038784765,0,0.855877976067841,0.636406495851874,0.78494864019923,0.539617372749944,0.823611089208164,0.235624804691373,0.202182481573316,0,0,0.48763373908959,0.974853958525138,0,0.682499557039929,0,0,0.551365343546124,0.66343897524122,0.876901770507525,0,2.62357900818653,0.405820753925408,0,0,0.286822704408103,0.589494246078727,0,0.709522128141196,0,0,0,0,0.48111056362756,0,1.08890984861323,0.282431402330337,0,0,0,0.229723400206959,1.52234282769651,0,1.13929437434833,1.42939065274673,1.64544909234478,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,0.557409525377156,0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| |||
|short_description=p4@PLXNC1 | |||
}} |
Revision as of 15:15, 11 January 2014
Short description: | p4@PLXNC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PLXNC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 91bp_to_ENST00000545312, NR_037687, uc009zsv.2_5end |
EntrezGene: | PLXNC1 |
HGNC: | 9106 |
UniProt: | F5H3A2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.20e-23 | 11 |
mature alpha-beta T cell | 9.10e-22 | 18 |
alpha-beta T cell | 9.10e-22 | 18 |
immature T cell | 9.10e-22 | 18 |
mature T cell | 9.10e-22 | 18 |
immature alpha-beta T cell | 9.10e-22 | 18 |
nongranular leukocyte | 6.77e-20 | 115 |
leukocyte | 4.19e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 1.14e-17 | 120 |
lymphoid lineage restricted progenitor cell | 3.39e-15 | 52 |
lymphocyte | 8.75e-15 | 53 |
common lymphoid progenitor | 8.75e-15 | 53 |
T cell | 1.62e-14 | 25 |
pro-T cell | 1.62e-14 | 25 |
hematopoietic cell | 1.25e-12 | 177 |
hematopoietic stem cell | 2.42e-12 | 168 |
hematopoietic oligopotent progenitor cell | 3.77e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.77e-11 | 161 |
classical monocyte | 8.22e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.22e-08 | 42 |
natural killer cell | 6.35e-07 | 3 |
pro-NK cell | 6.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.06e-09 | 98 |
blood island | 5.06e-09 | 98 |
hemolymphoid system | 1.52e-07 | 108 |