FFCP PHASE1:Hg19::chr12:92455709..92455717,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C52 | |||
|description=CAGE_peak_at_chr12:92455709..92455717,- | |||
|id=chr12:92455709..92455717,- | |||
|ontology_enrichment_celltype=CL:0000542!4.90e-27!53;CL:0000051!4.90e-27!53;CL:0000838!8.95e-26!52;CL:0002087!1.89e-21!119;CL:0000988!5.29e-21!182;CL:0000738!1.46e-20!140;CL:0002031!4.44e-20!124;CL:0000037!2.33e-19!172;CL:0000566!2.33e-19!172;CL:0002032!2.77e-19!165;CL:0000837!2.77e-19!165;CL:0000945!3.78e-15!24;CL:0000826!3.78e-15!24;CL:0000084!9.63e-11!25;CL:0000827!9.63e-11!25;CL:0000791!7.78e-08!18;CL:0000789!7.78e-08!18;CL:0002420!7.78e-08!18;CL:0002419!7.78e-08!18;CL:0000790!7.78e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.88e-32;24!CL:0000542;7.56e-17;53!CL:0002087;1.31e-10;104!CL:0000817;1.76e-09;1!CL:0000946;2.16e-09;1!CL:0000785;2.16e-09;1!CL:0000819;2.16e-09;1!CL:0000786;2.16e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.88e-32,24;CL:0000826,2.88e-32,24;CL:0000542,1.22e-31,53;CL:0000051,1.22e-31,53;CL:0000838,4.09e-28,52;CL:0000817,8.75e-25,3;CL:0002087,1.15e-21,115;CL:0002032,2.21e-18,161;CL:0000837,2.21e-18,161;CL:0002031,2.30e-18,120;CL:0000738,7.82e-18,136;CL:0000037,1.80e-17,168;CL:0000785,4.32e-17,2;CL:0000955,4.32e-17,2;CL:0000818,4.32e-17,2;CL:0000954,4.32e-17,2;CL:0000816,4.32e-17,2;CL:0000988,2.09e-16,177;CL:0000946,1.99e-09,1;CL:0000786,1.99e-09,1;CL:0000980,1.99e-09,1;CL:0000819,2.16e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000954;4.68e-17;2!CL:0000051;7.56e-17;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.05e-10!10;DOID:2531!1.11e-07!51;DOID:0060083!1.11e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.99e-20;10!DOID:630;1.43e-09;1!DOID:0050177;1.43e-09;1!DOID:0060060;1.43e-09;1!DOID:0060061;1.43e-09;1!DOID:0050427;1.43e-09;1!DOID:8691;1.43e-09;1!DOID:0060073;2.16e-09;1!DOID:8675;2.16e-09;1!DOID:12603;4.32e-09;1!DOID:2531;7.28e-08;51!DOID:0060083;7.28e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.82e-20,10;DOID:2531,2.63e-14,51;DOID:0060083,2.63e-14,51;DOID:0060060,1.32e-09,1;DOID:0060061,1.32e-09,1;DOID:8691,1.32e-09,1;DOID:630,1.43e-09,1;DOID:0050177,1.43e-09,1;DOID:0050427,1.43e-09,1;DOID:0060073,2.16e-09,1;DOID:8675,2.16e-09,1;DOID:12603,5.28e-09,1;DOID:1240,4.70e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002193!7.24e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,18.6448710025001,14.2034019748406,11.4917740717972,0,0,0.154816123316076,0,0,0.369754010166788,0.774672005803016,3.41206157969812,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,1.37898272294647,1.29096936716765,2.70852973188684,0.188242339542605,0,0.224723484445085,0.306083892370903,0.641858054152187,0.639337125799041,0,0,0,0,0.56738522469114,0.622822248995575,0,0,0,0,0.368277635987565,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,1.17842362989935,0.221533894583621,0.812411591295047,0.25618263945135,0,0,0,0,0.593146252648242,1.07016331235885,0,0.113309342697566,0,0.68725489096526,0,0.637130828648193,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0.428933980974443,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0.718874566474748,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0.648473311192717,0.540031437238115,0,0,0,0,1.11481905075431,5.33796088012846,0.995985806877798,0,0,0,0,0,0,13.009376704892,0,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,8.07377904296203,0,0,0,0,0.18714054040822,0,0,63.5227290381627,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,4.18488338567636,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0.611030144933625,0.889563386041866,0.370691816839509,0.626531697032732,0,0,0,4.74382451960732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0.229073192331831,2.4023299700675,0,0,0,0,0,0,0,0,0,0,0,10.7783815254519,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.592713324460491,0,0,0,0,0,0.899895566206002,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0,5.72425212390211,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0.491545817507439,0,8.79944541761692,0,0,0,0,0,0,0.383683113910955,0,0,1.63814457288021,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0.703484977438482,0,0,0,0,0,0,4.95506146489851,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98150233615243,0.243835849964539,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0.386747327841463,0.999411559249289,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.516711278688049,0.682821857254437,0.112131862580613,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,8.65534929218729 | |||
|short_description=p@chr12:92455709..92455717,- | |||
}} |
Revision as of 15:09, 11 January 2014
Short description: | p@chr12:92455709..92455717, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:92455709..92455717, - |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.88e-32 | 24 |
pro-B cell | 2.88e-32 | 24 |
lymphocyte | 1.22e-31 | 53 |
common lymphoid progenitor | 1.22e-31 | 53 |
lymphoid lineage restricted progenitor cell | 4.09e-28 | 52 |
precursor B cell | 8.75e-25 | 3 |
nongranular leukocyte | 1.15e-21 | 115 |
hematopoietic oligopotent progenitor cell | 2.21e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.21e-18 | 161 |
hematopoietic lineage restricted progenitor cell | 2.30e-18 | 120 |
leukocyte | 7.82e-18 | 136 |
hematopoietic stem cell | 1.80e-17 | 168 |
mature B cell | 4.32e-17 | 2 |
pre-B-II cell | 4.32e-17 | 2 |
transitional stage B cell | 4.32e-17 | 2 |
small pre-B-II cell | 4.32e-17 | 2 |
immature B cell | 4.32e-17 | 2 |
hematopoietic cell | 2.09e-16 | 177 |
antibody secreting cell | 1.99e-09 | 1 |
plasma cell | 1.99e-09 | 1 |
plasmablast | 1.99e-09 | 1 |
B-1 B cell | 2.16e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.82e-20 | 10 |
hematologic cancer | 2.63e-14 | 51 |
immune system cancer | 2.63e-14 | 51 |
non-Hodgkin lymphoma | 1.32e-09 | 1 |
cutaneous T cell lymphoma | 1.32e-09 | 1 |
mycosis fungoides | 1.32e-09 | 1 |
genetic disease | 1.43e-09 | 1 |
monogenic disease | 1.43e-09 | 1 |
xeroderma pigmentosum | 1.43e-09 | 1 |
lymphatic system cancer | 2.16e-09 | 1 |
lymphosarcoma | 2.16e-09 | 1 |
acute leukemia | 5.28e-09 | 1 |
leukemia | 4.70e-07 | 39 |