FFCP PHASE1:Hg19::chr12:81331460..81331505,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8825 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17787 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000549417_5end | |||
|coexpression_cluster_id=C2243 | |||
|description=CAGE_peak_1_at_LIN7A_5end | |||
|id=chr12:81331460..81331505,- | |||
|ontology_enrichment_celltype=CL:0002057!2.76e-13!42;CL:0000766!1.59e-12!76;CL:0002194!5.15e-11!63;CL:0000576!5.15e-11!63;CL:0000040!5.15e-11!63;CL:0000559!5.15e-11!63;CL:0000860!8.00e-11!45;CL:0002009!4.78e-10!65;CL:0000839!2.04e-09!70;CL:0000557!1.57e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.61e-12;33!CL:0002057;2.61e-12;33!CL:0000576;8.76e-11;48!CL:0000473;5.17e-10;39!CL:0000234;5.17e-10;39!CL:0000766;1.29e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.56e-14,72;CL:0000860,1.12e-13,42;CL:0002057,1.12e-13,42;CL:0002194,2.48e-13,59;CL:0000576,2.48e-13,59;CL:0000040,2.48e-13,59;CL:0000559,2.48e-13,59;CL:0000473,5.59e-13,48;CL:0000234,5.59e-13,48;CL:0002009,4.40e-12,61;CL:0000839,4.39e-11,66;CL:0000557,5.50e-10,67 | |||
|ontology_enrichment_development_v019=CL:0002057;2.86e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.97e-25!115;UBERON:0005743!4.38e-20!86;UBERON:0000073!5.38e-20!94;UBERON:0001016!5.38e-20!94;UBERON:0001017!1.59e-19!82;UBERON:0002616!1.64e-18!59;UBERON:0001049!1.93e-18!57;UBERON:0005068!1.93e-18!57;UBERON:0006241!1.93e-18!57;UBERON:0007135!1.93e-18!57;UBERON:0000955!2.91e-16!69;UBERON:0006238!2.91e-16!69;UBERON:0002780!4.76e-16!41;UBERON:0001890!4.76e-16!41;UBERON:0006240!4.76e-16!41;UBERON:0003080!6.28e-16!42;UBERON:0002346!1.49e-15!90;UBERON:0003075!2.85e-14!86;UBERON:0007284!2.85e-14!86;UBERON:0000468!1.37e-13!659;UBERON:0001869!1.52e-13!32;UBERON:0002020!1.55e-13!34;UBERON:0003528!1.55e-13!34;UBERON:0001893!2.31e-13!34;UBERON:0002791!5.97e-13!33;UBERON:0000956!3.19e-12!25;UBERON:0000203!3.19e-12!25;UBERON:0003056!4.35e-12!61;UBERON:0002619!1.26e-11!22;UBERON:0000924!2.48e-11!173;UBERON:0006601!2.48e-11!173;UBERON:0000033!4.18e-11!123;UBERON:0002390!5.65e-11!102;UBERON:0003061!5.65e-11!102;UBERON:0001950!1.28e-10!20;UBERON:0004121!2.40e-10!169;UBERON:0000153!4.33e-10!129;UBERON:0007811!4.33e-10!129;UBERON:0002193!7.97e-10!112;UBERON:0004765!5.16e-09!101;UBERON:0001434!5.16e-09!101;UBERON:0000467!5.78e-09!625;UBERON:0000480!7.32e-09!626;UBERON:0000922!9.75e-09!612;UBERON:0002371!1.33e-08!80;UBERON:0001474!2.31e-08!86;UBERON:0000062!3.01e-08!511;UBERON:0002405!6.84e-08!115;UBERON:0002050!9.42e-08!605;UBERON:0005423!9.42e-08!605;UBERON:0000923!1.42e-07!604;UBERON:0005291!1.42e-07!604;UBERON:0006598!1.42e-07!604;UBERON:0002532!1.42e-07!604;UBERON:0000479!7.87e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.15e-13;32!UBERON:0000956;1.41e-12;25!UBERON:0000203;1.41e-12;25!UBERON:0002791;2.17e-12;32!UBERON:0003528;3.24e-12;34!UBERON:0002020;3.24e-12;34!UBERON:0001893;4.84e-12;34!UBERON:0002619;5.53e-12;22!UBERON:0002780;5.55e-12;41!UBERON:0001890;5.55e-12;41!UBERON:0000073;3.14e-11;53!UBERON:0002616;3.14e-11;53!UBERON:0001950;6.13e-11;20!UBERON:0001017;6.55e-08;75!UBERON:0000955;8.44e-08;68!UBERON:0001016;3.89e-07;83!UBERON:0007023;5.98e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.77e-24,114;UBERON:0001017,1.30e-19,81;UBERON:0001016,2.90e-19,89;UBERON:0000073,3.97e-19,53;UBERON:0002616,3.97e-19,53;UBERON:0001049,4.27e-19,56;UBERON:0005068,4.27e-19,56;UBERON:0006241,4.27e-19,56;UBERON:0007135,4.27e-19,56;UBERON:0002346,3.53e-17,86;UBERON:0002780,1.56e-16,41;UBERON:0001890,1.56e-16,41;UBERON:0003080,1.56e-16,41;UBERON:0006240,1.56e-16,41;UBERON:0000955,2.97e-16,68;UBERON:0006238,2.97e-16,68;UBERON:0003075,8.16e-16,82;UBERON:0007284,8.16e-16,82;UBERON:0001869,6.03e-14,32;UBERON:0003528,6.17e-14,34;UBERON:0002020,6.17e-14,34;UBERON:0001893,9.29e-14,34;UBERON:0002791,1.55e-13,32;UBERON:0000956,1.40e-12,25;UBERON:0000203,1.40e-12,25;UBERON:0003056,1.44e-12,61;UBERON:0002390,1.73e-12,98;UBERON:0003061,1.73e-12,98;UBERON:0004121,1.97e-12,171;UBERON:0000924,1.97e-12,171;UBERON:0006601,1.97e-12,171;UBERON:0002619,5.79e-12,22;UBERON:0001434,3.92e-11,100;UBERON:0002193,4.53e-11,108;UBERON:0001950,6.37e-11,20;UBERON:0011216,7.52e-11,223;UBERON:0010314,2.59e-10,132;UBERON:0002371,5.00e-10,76;UBERON:0010371,9.26e-10,104;UBERON:0001474,1.36e-09,82;UBERON:0004765,1.64e-09,90;UBERON:0000479,3.87e-09,773;UBERON:0000923,6.12e-09,560;UBERON:0010316,6.12e-09,560;UBERON:0005291,6.12e-09,560;UBERON:0006598,6.12e-09,560;UBERON:0010317,6.12e-09,560;UBERON:0002532,6.12e-09,560;UBERON:0002050,1.43e-08,564;UBERON:0000922,2.40e-08,592;UBERON:0005423,7.97e-08,581;UBERON:0002405,2.21e-07,93 | |||
|phase1_expression=1.2717486548939,4.49611100171065,1.26858963686374,3.00219895059391,3.5756887554183,0,2.53299878168311,10.1075179748293,7.57438321779532,2.94880723801811,0,0,0,17.6985884732867,9.94192127183747,0,0,0,0,4.43235809076436,4.69201589861782,2.82109249330279,15.4567433050771,11.9080749813409,14.4374035534023,0,0,0,20.0615781192941,14.2016877295969,8.3600706590681,0,0,0,0,0,5.28480790802725,17.1738576644882,18.6506336147232,17.577880527984,19.9284772073533,16.518576966968,16.2272607609538,22.9729217271712,13.9814099164859,12.6143711817664,19.9888971738889,16.8578834088949,13.0076675775944,30.4953935861479,16.1381245113333,22.9387762991928,32.7508396699788,16.7826017731795,29.7938270507552,21.4596267078569,9.00590295190891,10.7867272533641,19.2832852193669,15.0836642725764,22.3767994029664,26.0582527147506,16.9544108978387,17.0489900213078,31.0523885332585,12.4824749432051,16.8162007228805,32.4110778181199,21.3807996552283,27.5829832775498,27.848377121135,20.9918252512912,21.2029799585393,6.76016916198214,10.4176106982871,9.01532175686016,28.7561295735027,27.9329020685202,32.9487452729014,2.56511469367124,3.38158351238453,2.55729815270488,0,1.09227722252426,0,1.28019066769952,0,0,0,0,0,0,0,0,5.04457706683382,4.74091352595139,0,0,0.205601498999509,0,0.32592226663359,0,0,0,1.17842362989935,0.664601683750863,3.79125409271022,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0.903450714466637,0.383959833463255,3.74792179657038,2.60454977248419,0.821127996921047,0,0,0.144824403882799,0,2.68280343881454,3.83587685530591,5.06014813338393,12.5334477658972,4.05570253090306,3.1811437882044,0.973269740605272,8.03545945894577,3.32594096193846,2.63504357079378,7.13835961462534,0,0,2.92092654289215,1.39303789839414,0.930705723632056,0.476981248610684,0.571994910780128,0,0,0.860234595106124,0,0,0,0.275118041940067,0,1.03366703667732,2.13459757612026,2.34304428935269,0,0.760272105718513,0.24406205754817,0,0,9.82297011124877,5.16417557040191,3.60356737546631,0,0,0.916008719652036,63.2546003693104,58.1670396222488,0,4.47274756525787,1.2663051166458,0.132409180813219,0.573673241497627,1.06400514659507,0.560677600142307,0,0.74000264525148,10.2699641681923,6.06198024313596,2.45192854670188,3.78393569112329,9.21881479167998,5.85803579584492,1.87296046098192,4.56377457235559,2.98897361103602,11.978318861664,16.6729132699175,17.8372524511856,30.0106631744693,7.61572767332961,31.2043859150812,15.4440371446667,14.5887488274349,3.64064544775211,5.03032699271367,17.5069558512229,18.6426594609227,29.9229244722918,6.14568669233173,16.5503409731471,18.1788051276982,3.97012641060074,9.14887142013196,6.19316427573846,4.02670612203168,21.606558918077,15.0456692688121,18.034837803194,14.7032316501956,23.9662391782598,22.9951332180429,10.3497847440087,9.38908966151453,13.4166227159614,11.3603069605317,16.6240962075606,10.6823173155607,0,0,0,7.19644866164613,9.93973262411139,11.9679761155604,7.87824018116815,9.84051318414951,23.3585509808531,0,4.5026865673502,1.38134921352481,20.4321888334071,7.21879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,2.4694440679884,1.47008711385542,48.1669132322957,27.5191620669735,44.3092430011053,0,72.9321440560663,6.51957679134397,0,0,0,0.0925884451585296,5.53874119027552,3.11980435583874,1.44331342025273,10.4337364477569,10.0971477042807,0.288732895522148,0,3.23432058798817,19.7551099489819,16.3112370798026,8.8638122191463,3.51006397708857,4.7561971932393,0,0,0,0,0.290633938513962,0,3.94130590316755,0,0.414656231081544,1.8735593944205,0.25248486685276,0,0,0,3.4214489204541,0,0,0,3.81245686774226,3.48768055066624,12.9808765903082,1.68053230485111,3.57656445851882,7.607724773004,1.32969058292435,4.16029747645464,3.08648849114571,4.25547396069835,5.86128793835419,7.57783366388182,1.62786481617433,1.64648067356154,9.44634934451832,6.39705507736582,6.33561498346743,0,0,0,6.08118903205952,6.02708509718552,2.10833939483032,2.15662369942424,1.14861935834114,5.70547620162874,14.3333493600903,11.5066740628215,0.895304816199478,0,0,0,0.513372145118994,15.2456774533478,57.2615356973536,22.4253755705532,22.4471795548027,26.7934275694329,91.3788569215562,134.622656641811,191.459967207448,22.5752344763217,20.5069913634468,9.49427582949075,5.61521326133179,5.88815663030634,4.73107245101804,0.819989904948992,5.41702979509894,2.27407504055985,5.17365356462525,9.29915837949611,4.97796755062599,8.77524506127637,7.04884166865866,5.49029478097369,8.89102512328416,18.9828496720383,5.12292277456533,0.303127571446259,0,0.604780586659361,0.744323423456331,2.60885354589706,1.96462066103151,0.384417447767103,2.55853624533352,1.93024705372329,0,2.00472601943452,1.24293207719189,16.4254312027618,2.59627214591811,9.18061989833678,100.313343161046,0,0,7.92219692335787,11.2896524164165,7.47409165268718,0.451199612907412,2.84956747286335,0.784349769176855,1.46139224653261,4.85537492907228,1.13733384070897,1.02056223165909,12.9549549661284,1.54227252690289,1.35473218771926,1.00337954770971,0.254876273045038,0,0.22387475472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| |||
|short_description=p1@LIN7A | |||
}} |
Revision as of 14:55, 11 January 2014
Short description: | p1@LIN7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LIN7A_5end |
Coexpression cluster: | C2243_extraskeletal_pineal_Neutrophils_cerebellum_small_large_Prostate |
Association with transcript: | 0bp_to_ENST00000549417_5end |
EntrezGene: | LIN7A |
HGNC: | 17787 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.56e-14 | 72 |
classical monocyte | 1.12e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-13 | 42 |
monopoietic cell | 2.48e-13 | 59 |
monocyte | 2.48e-13 | 59 |
monoblast | 2.48e-13 | 59 |
promonocyte | 2.48e-13 | 59 |
defensive cell | 5.59e-13 | 48 |
phagocyte | 5.59e-13 | 48 |
macrophage dendritic cell progenitor | 4.40e-12 | 61 |
myeloid lineage restricted progenitor cell | 4.39e-11 | 66 |
granulocyte monocyte progenitor cell | 5.50e-10 | 67 |