FFCP PHASE1:Hg19::chr12:75875040..75875053,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11010 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17001 | |||
|TSSclassifier=strong | |||
|UniProt=F8VUC2 | |||
|association_with_transcript=56bp_to_ENST00000550491_5end | |||
|description=CAGE_peak_6_at_GLIPR1_5end | |||
|id=chr12:75875040..75875053,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.22e-32!140;CL:0002087!1.01e-31!119;CL:0002031!6.02e-26!124;CL:0000037!1.78e-25!172;CL:0000566!1.78e-25!172;CL:0000988!1.53e-23!182;CL:0002032!1.46e-22!165;CL:0000837!1.46e-22!165;CL:0002194!2.20e-22!63;CL:0000576!2.20e-22!63;CL:0000040!2.20e-22!63;CL:0000559!2.20e-22!63;CL:0002057!2.91e-22!42;CL:0002009!3.97e-21!65;CL:0000766!5.88e-21!76;CL:0000557!8.03e-20!71;CL:0000860!8.83e-20!45;CL:0000839!4.62e-19!70;CL:0000763!1.39e-13!112;CL:0000049!1.39e-13!112;CL:0000945!9.84e-11!24;CL:0000826!9.84e-11!24;CL:0000542!6.22e-09!53;CL:0000051!6.22e-09!53;CL:0002320!1.27e-08!365;CL:0000838!2.19e-08!52;CL:0000134!4.97e-08!358;CL:0000236!2.08e-07!14;CL:0000048!4.48e-07!430;CL:0000034!7.71e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000784;3.09e-19;3!CL:0000945;3.66e-19;24!CL:0000236;2.14e-16;13!CL:0000767;5.27e-09;3!CL:0002032;2.27e-07;1!CL:0000557;2.27e-07;1!CL:0000094;2.48e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,8.96e-20,3;CL:0000945,3.06e-19,24;CL:0000826,3.06e-19,24;CL:0000738,4.88e-19,136;CL:0000037,1.08e-17,168;CL:0000988,1.52e-16,177;CL:0000236,2.50e-15,14;CL:0002032,2.82e-15,161;CL:0000837,2.82e-15,161;CL:0002087,1.96e-13,115;CL:0002031,1.01e-12,120;CL:0000766,8.60e-10,72;CL:0000767,9.28e-09,3;CL:0000763,3.67e-08,108;CL:0000049,3.67e-08,108;CL:0000838,4.29e-08,52;CL:0000542,6.49e-08,53;CL:0000051,6.49e-08,53;CL:0000557,2.43e-07,67;CL:0000094,2.93e-07,8;CL:0000473,4.56e-07,48;CL:0000234,4.56e-07,48;CL:0002194,6.48e-07,59;CL:0000576,6.48e-07,59;CL:0000040,6.48e-07,59;CL:0000559,6.48e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.88e-22!102;UBERON:0003061!9.88e-22!102;UBERON:0002193!2.11e-18!112;UBERON:0002371!3.09e-18!80;UBERON:0001474!6.77e-17!86;UBERON:0004765!3.41e-14!101;UBERON:0001434!3.41e-14!101;UBERON:0002405!2.67e-11!115;UBERON:0003081!7.64e-11!216;UBERON:0002204!9.69e-11!167;UBERON:0002384!3.52e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.14e-08,98;UBERON:0003061,6.14e-08,98;UBERON:0002193,5.51e-07,108 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0.247532705920093,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0.369363174230364,0,0.313454721478088,0,0,0.125542639594803,0.534893840235659,0.738905305049512,1.02324015707783,0,1.15148819429164,1.08371286321253,0,0,0,2.40148321798935,1.56386155736164,0.880801318004542,0.553995408531877,0,0.217010870715852,0.895661896959697,0.971680998056939,0,1.16318591023652,0.377875943688809,0.485168122375632,0.697287110717054,0.411167888021826,0.619412741790207,0.28769239232215,0.256160706529101,0,0.344745680736619,0.645484683583826,1.35426486594342,0.752969358170419,0.272906150057846,0.674170453335254,0.306083892370903,0.641858054152187,1.27867425159808,0.329851300186716,0.398927315243264,0,0.870627715885752,0,0.622822248995575,0.502497330513487,0.521482918420201,0.434377689410233,0.605399502633369,0.736555271975129,1.26584954976354,0.633765858935825,0.425208599930087,0.419317291016752,0.786300418025466,1.35159203557356,0.16072558669708,0.855038231223746,0,1.82664153764634,0,1.09227722252426,0.889509253863555,1.70692089026603,2.00197993518006,0.574752439954483,0.661044872784862,1.90810750907073,0,1.76171156811282,1.14681968437569,1.32171328579026,2.24203425192614,0.263384084775077,0,0.786021525498329,0.411202997999018,0,0,0,0,0.779873198196215,0,0.664601683750863,0.270803863765016,0.128091319725675,0.390178042679635,0.657751618414705,0,0.289803085735052,0,0,0,0.453237370790265,0.383220493601921,0.34362744548263,1.01207876807801,0,0,0,0.301150238155546,0.383959833463255,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0,0,0,0,0.283604451492204,0,0.351339142772504,0,0,0,0,0.348259474598534,0,3.33886874027479,1.71598473234038,1.85728750664782,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0.211931901159562,0,0.103052529238439,0,0,0.337552664482532,0.389748020644795,0.252433774244115,0.184099797284599,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0.984868024349589,0.702012795417713,0.891786973732369,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,2.43247561282381,0,2.10833939483032,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.385029108839245,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0,0.271265023699736,0.623912584592421,0.178428988797162,0.157702415033935,0.468565659970853,0.601892199455438,0,0,0,0,0,0,0.343143423810856,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0,0.246381468041427,0,0,0,0.200506470303285,0,0,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.275673144969061,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.255225424989168,0,0,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0.37064843820784,0.143124886741991,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0.136499911407986,0,0,1.10273068709225,0,0,0.578775534266688,0,0,0,0.845086807596724,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,1.29694662238543,1.08006287447623,0,0,0,0,0.743212700502875,0.432807638929335,0.142283686696828,0,0,0.5745161103971,0,0,0,1.14117339516596,0,0,0,0.802940375518498,0,0,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0.0897576444097721,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0.995261931078505,0,0,0,0.123563938946503,0,0.202203398942031,0,0,0.182454789215666,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0.5085370753095,0.542999601753713,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0.302461847526478,0.15543720058278,0,0.159296767163702,0.449803112163605,0.310525913752519,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0.192619830407303,0,0,0.226705925512272,0,0,0,0,0,0,0,0.337884881306145,0,0,0.303859956177382,0.138258436151731,0.194860308839388,0.132864840313363,0.163565394255844,0,0.491545817507439,0,0,0.426766918776564,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0.203909198930495,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0.196308467114945,0.297046400327086,0,0.339854229375634,0.469919589899268,0.193373663920732,0.599646935549574,0,0,0.0802413666891683,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.258355639344024,0,0.112131862580613,0.0636471582781649,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p6@GLIPR1 | |||
}} |
Revision as of 14:45, 11 January 2014
Short description: | p6@GLIPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GLIPR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 56bp_to_ENST00000550491_5end |
EntrezGene: | GLIPR1 |
HGNC: | 17001 |
UniProt: | F8VUC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 8.96e-20 | 3 |
lymphocyte of B lineage | 3.06e-19 | 24 |
pro-B cell | 3.06e-19 | 24 |
leukocyte | 4.88e-19 | 136 |
hematopoietic stem cell | 1.08e-17 | 168 |
hematopoietic cell | 1.52e-16 | 177 |
B cell | 2.50e-15 | 14 |
hematopoietic oligopotent progenitor cell | 2.82e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.82e-15 | 161 |
nongranular leukocyte | 1.96e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 1.01e-12 | 120 |
myeloid leukocyte | 8.60e-10 | 72 |
basophil | 9.28e-09 | 3 |
myeloid cell | 3.67e-08 | 108 |
common myeloid progenitor | 3.67e-08 | 108 |
lymphoid lineage restricted progenitor cell | 4.29e-08 | 52 |
lymphocyte | 6.49e-08 | 53 |
common lymphoid progenitor | 6.49e-08 | 53 |
granulocyte monocyte progenitor cell | 2.43e-07 | 67 |
granulocyte | 2.93e-07 | 8 |
defensive cell | 4.56e-07 | 48 |
phagocyte | 4.56e-07 | 48 |
monopoietic cell | 6.48e-07 | 59 |
monocyte | 6.48e-07 | 59 |
monoblast | 6.48e-07 | 59 |
promonocyte | 6.48e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.14e-08 | 98 |
blood island | 6.14e-08 | 98 |
hemolymphoid system | 5.51e-07 | 108 |