FFCP PHASE1:Hg19::chr12:72080145..72080169,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55266 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25605 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-106bp_to_ENST00000549735_5end | |||
|description=CAGE_peak_5_at_TMEM19_5end | |||
|id=chr12:72080145..72080169,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.00e-12!52;CL:0000542!2.89e-12!53;CL:0000051!2.89e-12!53;CL:0000791!2.65e-10!18;CL:0000789!2.65e-10!18;CL:0002420!2.65e-10!18;CL:0002419!2.65e-10!18;CL:0000790!2.65e-10!18;CL:0000084!2.91e-09!25;CL:0000827!2.91e-09!25;CL:0000625!3.50e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.64e-20;18!CL:0000789;4.64e-20;18!CL:0002419;4.64e-20;18!CL:0000084;1.52e-16;25!CL:0000625;8.08e-16;11!CL:0000542;1.60e-12;53!CL:0000236;8.64e-11;13!CL:0000624;1.87e-07;6!CL:0000945;9.20e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.51e-22,52;CL:0000542,1.09e-21,53;CL:0000051,1.09e-21,53;CL:0000791,4.68e-20,18;CL:0000789,4.68e-20,18;CL:0002420,4.68e-20,18;CL:0002419,4.68e-20,18;CL:0000790,4.68e-20,18;CL:0000084,1.19e-16,25;CL:0000827,1.19e-16,25;CL:0000625,9.11e-16,11;CL:0000236,4.55e-12,14;CL:0000738,3.26e-11,136;CL:0002087,6.54e-10,115;CL:0002031,1.27e-09,120;CL:0000624,1.70e-07,6;CL:0000037,3.65e-07,168;CL:0000945,5.62e-07,24;CL:0000826,5.62e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;4.64e-20;18!CL:0000051;1.60e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.88e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.49e-08,114 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0.986680828671798,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0.245733936501509,0,0.655324116390517,0.527533956456907,0.37129905888014,0.662794751455832,0.672325146451775,1.20538905604795,0.730310090387373,0.487932798790507,0.123121058076788,0.408001382488506,0,0.85870796139317,0.273748850145768,0.376627918784408,0.458480434487708,0.164201178899891,0.236132343941038,0,0.383829398097213,1.70297735647684,0,0.30120591877825,0.369754010166788,0.697204805222715,0.284338464974843,1.46800219667424,0.553995408531877,0.802177789880567,1.51907609501096,0.223915474239924,1.29557466407592,1.28787783817093,0,0.377875943688809,0.242584061187816,0.464858073811369,0,0,0.575384784644301,0.512321413058201,0.709446689665756,0.344745680736619,0,0,0.941211697713023,0,0,0,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,1.47311054395026,0,0.633765858935825,0.212604299965044,0.419317291016752,0.336985893439485,0.450530678524519,0.48217676009124,0.855038231223746,0.79566670879636,0.365328307529268,12.3197371122926,3.82297027883492,7.11607403090844,5.9742231159311,4.80475184443215,7.47178171940828,1.98313461835459,4.77026877267682,2.27685187643779,1.76171156811282,0.764546456250458,0,0.560508562981536,1.58030450865046,1.37696839079683,1.17903228824749,1.23360899399706,1.83905144929746,2.93330039970231,2.8406868344084,0,1.33692548262208,1.76763544484902,1.99380505125259,2.43723477388514,0.512365278902701,0.910415432919148,0.986627427622057,1.38175008892924,0.289803085735052,1.77943875794473,2.94294910898684,4.18142095219907,1.24640276967323,1.14966148080576,1.03088233644789,1.51811815211702,2.54852331459277,3.90650072313851,4.75226022224187,2.71035214339991,4.60751800155906,4.99722906209383,3.55165878066025,2.46338399076314,2.21767417547206,1.06976078313403,1.59306844271079,0,0,0.383587685530591,0.722878304769133,0,0.144846518960824,1.5905718941022,0.486634870302636,0.756278537312543,0.221729397462564,0.087834785693126,0.916853528483988,0,0,0,0.696518949197069,1.19662164466979,2.38490624305342,7.43593384014166,5.57186251994347,0.79504962946682,0,0,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,1.06729878806013,1.67360306382335,0,0,0,0,0.81014194788176,0.17859945656816,0,0.563057402416611,0,0,0.183201743930407,0,0,0.872188104285069,1.98788780678127,0.379891534993739,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.404132016209064,0.490385709340376,0.454072282934794,0.576175924479999,0,0,0,1.49448680551801,0.469737994575059,1.29498355494505,0.280901613404497,1.63323337003915,0.61417158655884,0.516628905878827,2.37600571456411,0.741800787835671,0,0.718618141816238,0.673344455816265,0.250237039743928,0,0,0.30648779579902,0,0.340296549480063,0,1.2813443329114,0,0.300091096084402,0.412210116953756,0.257640540045629,0.558350568994769,0.843881661206331,0.194874010322397,0.252433774244115,0.460249493211497,0.161646056818812,0.355009592516614,0.503760491138201,0.508681776931463,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0.343135620597051,0.219500570817251,0,0.201057944823262,0.462942225792648,0,0,0,0.463721619900307,0.469634776943287,0.288732895522148,0,0.380508304469197,0,0,0.492434012174795,0.702012795417713,0.743155811443641,0,0.671928512795438,0.708875486211932,0,0,0.766765358330422,0,1.05658120815871,0,0,0.25248486685276,0.825472625798197,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0,0.784917590417525,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.714889968290738,0.542621605391443,0.823240336780769,0.65147236858747,0.710783897485092,0.791951872933429,0.602878754119172,0.871533458600294,0.499864955910285,0,1.50677127429638,0,0,0,0,1.15825045334063,0.61642896765115,0.179060963239896,0.336255431980582,1.57624608161542,0.862510299438069,1.15508732651774,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0.736148950314839,0,0.271265023699736,0.207970861530807,0.892144943985809,0.315404830067869,0.468565659970853,0.902838299183157,0,2.0694614258501,0,0,0.955719759148911,0,1.02943027143257,1.6541442089831,0.431428401637234,0.426910231213777,0.303127571446259,0,0.30239029332968,0.744323423456331,0.460385919864187,1.40330047216537,2.56278298511402,1.53512174720011,0.965123526861645,1.48418066444991,0.308419387605311,0.355123450626254,0,1.03850885836724,0.929683027679674,0.241718899183244,0.802025881213139,0.736647911487171,0.459257792658427,0.364182336013434,0.393373244878272,0,0.308061348417659,0,0,0.316654886678627,1.13733384070897,0.680374821106063,0.215915916102139,0,0,0,0.254876273045038,0,0,0.219259876645935,0.261435451024901,0.256450125116389,0,0.97613518399290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| |||
|short_description=p5@TMEM19 | |||
}} |
Revision as of 14:41, 11 January 2014
Short description: | p5@TMEM19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TMEM19_5end |
Coexpression cluster: | NA |
Association with transcript: | -106bp_to_ENST00000549735_5end |
EntrezGene: | TMEM19 |
HGNC: | 25605 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.51e-22 | 52 |
lymphocyte | 1.09e-21 | 53 |
common lymphoid progenitor | 1.09e-21 | 53 |
mature alpha-beta T cell | 4.68e-20 | 18 |
alpha-beta T cell | 4.68e-20 | 18 |
immature T cell | 4.68e-20 | 18 |
mature T cell | 4.68e-20 | 18 |
immature alpha-beta T cell | 4.68e-20 | 18 |
T cell | 1.19e-16 | 25 |
pro-T cell | 1.19e-16 | 25 |
CD8-positive, alpha-beta T cell | 9.11e-16 | 11 |
B cell | 4.55e-12 | 14 |
leukocyte | 3.26e-11 | 136 |
nongranular leukocyte | 6.54e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.27e-09 | 120 |
CD4-positive, alpha-beta T cell | 1.70e-07 | 6 |
hematopoietic stem cell | 3.65e-07 | 168 |
lymphocyte of B lineage | 5.62e-07 | 24 |
pro-B cell | 5.62e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.49e-08 | 114 |