FFCP PHASE1:Hg19::chr12:70687719..70687723,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3327 | |||
|description=CAGE_peak_at_chr12:70687719..70687723,+ | |||
|id=chr12:70687719..70687723,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.93e-16!140;CL:0000037!1.06e-14!172;CL:0000566!1.06e-14!172;CL:0002087!4.64e-14!119;CL:0002031!9.83e-14!124;CL:0002032!3.09e-12!165;CL:0000837!3.09e-12!165;CL:0000988!8.30e-12!182;CL:0002057!1.98e-09!42;CL:0000860!4.72e-09!45;CL:0002009!1.55e-07!65;CL:0000839!2.71e-07!70;CL:0000766!3.29e-07!76;CL:0000557!6.68e-07!71;CL:0002194!7.29e-07!63;CL:0000576!7.29e-07!63;CL:0000040!7.29e-07!63;CL:0000559!7.29e-07!63;CL:0000542!8.34e-07!53;CL:0000051!8.34e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000624;7.74e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.49e-17,136;CL:0000037,2.05e-15,168;CL:0002087,2.00e-14,115;CL:0000988,1.67e-13,177;CL:0002031,5.55e-13,120;CL:0002032,5.34e-12,161;CL:0000837,5.34e-12,161;CL:0000860,2.10e-09,42;CL:0002057,2.10e-09,42;CL:0000473,7.08e-09,48;CL:0000234,7.08e-09,48;CL:0002393,3.53e-08,9;CL:0002397,3.53e-08,9;CL:0002009,5.28e-08,61;CL:0000766,1.10e-07,72;CL:0002194,5.05e-07,59;CL:0000576,5.05e-07,59;CL:0000040,5.05e-07,59;CL:0000559,5.05e-07,59;CL:0000624,7.74e-07,6;CL:0000839,9.59e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;4.86e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.53e-15!115;UBERON:0001049!4.30e-14!57;UBERON:0005068!4.30e-14!57;UBERON:0006241!4.30e-14!57;UBERON:0007135!4.30e-14!57;UBERON:0002616!7.21e-12!59;UBERON:0000955!5.89e-11!69;UBERON:0006238!5.89e-11!69;UBERON:0003080!1.47e-10!42;UBERON:0002780!3.17e-10!41;UBERON:0001890!3.17e-10!41;UBERON:0006240!3.17e-10!41;UBERON:0001017!5.03e-10!82;UBERON:0000073!6.43e-10!94;UBERON:0001016!6.43e-10!94;UBERON:0005743!2.05e-09!86;UBERON:0002346!3.06e-08!90;UBERON:0002020!4.70e-08!34;UBERON:0003528!4.70e-08!34;UBERON:0003075!1.40e-07!86;UBERON:0007284!1.40e-07!86;UBERON:0001893!1.50e-07!34;UBERON:0002791!2.56e-07!33;UBERON:0001869!6.82e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;1.63e-07;9!UBERON:0002308;1.63e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.09e-12,114;UBERON:0001049,1.33e-11,56;UBERON:0005068,1.33e-11,56;UBERON:0006241,1.33e-11,56;UBERON:0007135,1.33e-11,56;UBERON:0000073,6.98e-11,53;UBERON:0002616,6.98e-11,53;UBERON:0002346,6.45e-09,86;UBERON:0000955,3.77e-08,68;UBERON:0006238,3.77e-08,68;UBERON:0003075,5.23e-08,82;UBERON:0007284,5.23e-08,82;UBERON:0000125,6.70e-08,9;UBERON:0002308,6.70e-08,9;UBERON:0001016,1.46e-07,89;UBERON:0002780,2.16e-07,41;UBERON:0001890,2.16e-07,41;UBERON:0003080,2.16e-07,41;UBERON:0006240,2.16e-07,41;UBERON:0001017,4.63e-07,81 | |||
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| |||
|short_description=p@chr12:70687719..70687723,+ | |||
}} |
Revision as of 14:38, 11 January 2014
Short description: | p@chr12:70687719..70687723, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:70687719..70687723, + |
Coexpression cluster: | C3327_liposarcoma_Neutrophils_CD8_Natural_CD4_CD14_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.49e-17 | 136 |
hematopoietic stem cell | 2.05e-15 | 168 |
nongranular leukocyte | 2.00e-14 | 115 |
hematopoietic cell | 1.67e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 5.55e-13 | 120 |
hematopoietic oligopotent progenitor cell | 5.34e-12 | 161 |
hematopoietic multipotent progenitor cell | 5.34e-12 | 161 |
classical monocyte | 2.10e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.10e-09 | 42 |
defensive cell | 7.08e-09 | 48 |
phagocyte | 7.08e-09 | 48 |
intermediate monocyte | 3.53e-08 | 9 |
CD14-positive, CD16-positive monocyte | 3.53e-08 | 9 |
macrophage dendritic cell progenitor | 5.28e-08 | 61 |
myeloid leukocyte | 1.10e-07 | 72 |
monopoietic cell | 5.05e-07 | 59 |
monocyte | 5.05e-07 | 59 |
monoblast | 5.05e-07 | 59 |
promonocyte | 5.05e-07 | 59 |
CD4-positive, alpha-beta T cell | 7.74e-07 | 6 |
myeloid lineage restricted progenitor cell | 9.59e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.09e-12 | 114 |
neural tube | 1.33e-11 | 56 |
neural rod | 1.33e-11 | 56 |
future spinal cord | 1.33e-11 | 56 |
neural keel | 1.33e-11 | 56 |
regional part of nervous system | 6.98e-11 | 53 |
regional part of brain | 6.98e-11 | 53 |
neurectoderm | 6.45e-09 | 86 |
brain | 3.77e-08 | 68 |
future brain | 3.77e-08 | 68 |
neural plate | 5.23e-08 | 82 |
presumptive neural plate | 5.23e-08 | 82 |
neural nucleus | 6.70e-08 | 9 |
nucleus of brain | 6.70e-08 | 9 |
nervous system | 1.46e-07 | 89 |
regional part of forebrain | 2.16e-07 | 41 |
forebrain | 2.16e-07 | 41 |
anterior neural tube | 2.16e-07 | 41 |
future forebrain | 2.16e-07 | 41 |
central nervous system | 4.63e-07 | 81 |