FFCP PHASE1:Hg19::chr12:70004648..70004694,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=376132 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20264 | |||
|TSSclassifier=strong | |||
|UniProt=Q5BKY1 | |||
|association_with_transcript=247bp_to_ENST00000361484,NM_201550,uc001svc.2_5end | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_1_at_LRRC10_5end | |||
|id=chr12:70004648..70004694,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.07e-23;1!UBERON:0010227;1.34e-23;1!UBERON:0010226;3.67e-23;1!UBERON:0005062;6.79e-23;4!UBERON:0007284;6.79e-23;4 | |||
|ontology_enrichment_disease=DOID:114!1.66e-29!2;DOID:178!1.54e-15!1;DOID:326!1.54e-15!1;DOID:3978!1.54e-15!1;DOID:3394!1.54e-15!1;DOID:5844!1.54e-15!1;DOID:1287!2.76e-15!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.53e-44;2!DOID:178;5.13e-23;1!DOID:326;5.13e-23;1!DOID:3978;5.13e-23;1!DOID:3394;5.13e-23;1!DOID:5844;5.13e-23;1!DOID:1287;7.18e-23;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.53e-44,2;DOID:178,5.13e-23,1;DOID:326,5.13e-23,1;DOID:3978,5.13e-23,1;DOID:3394,5.13e-23,1;DOID:5844,5.13e-23,1;DOID:1287,7.18e-23,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!5.17e-42!27;UBERON:0000948!2.91e-21!24;UBERON:0005498!2.91e-21!24;UBERON:0004140!2.91e-21!24;UBERON:0009881!2.91e-21!24;UBERON:0004141!2.91e-21!24;UBERON:0003084!2.91e-21!24;UBERON:0007005!2.91e-21!24;UBERON:0004139!2.91e-21!24;UBERON:0004291!2.91e-21!24;UBERON:0004151!3.32e-20!3;UBERON:0003978!4.88e-20!3;UBERON:0009751!4.88e-20!3;UBERON:0000946!4.88e-20!3;UBERON:0002523!4.88e-20!3;UBERON:0005983!4.88e-20!3;UBERON:0002165!4.88e-20!3;UBERON:0002062!4.88e-20!3;UBERON:0007280!4.88e-20!3;UBERON:0003103!1.09e-19!69;UBERON:0002079!6.44e-16!1;UBERON:0002146!9.99e-16!1;UBERON:0005623!9.99e-16!1;UBERON:0002084!1.16e-15!1;UBERON:0002082!1.16e-15!1;UBERON:0004706!1.16e-15!1;UBERON:0002135!1.34e-15!1;UBERON:0001009!1.20e-11!113;UBERON:0002081!1.29e-08!2;UBERON:0002133!1.86e-08!2;UBERON:0004872!7.60e-08!84;UBERON:0007023!3.00e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.64e-70;25!UBERON:0000948;7.03e-36;22!UBERON:0004151;2.48e-30;3!UBERON:0003978;3.87e-30;3!UBERON:0000946;3.87e-30;3!UBERON:0002079;1.34e-23;1!UBERON:0002146;2.62e-23;1!UBERON:0005623;2.62e-23;1!UBERON:0002084;3.67e-23;1!UBERON:0002135;3.67e-23;1!UBERON:0002082;3.67e-23;1!UBERON:0003103;1.39e-16;61!UBERON:0002081;1.65e-12;2!UBERON:0002133;2.74e-12;2!UBERON:0010313;9.03e-10;10!UBERON:0001009;1.04e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.67e-65,27;UBERON:0000948,6.55e-33,24;UBERON:0005498,6.55e-33,24;UBERON:0004140,6.55e-33,24;UBERON:0009881,6.55e-33,24;UBERON:0004141,6.55e-33,24;UBERON:0003084,6.55e-33,24;UBERON:0007005,6.55e-33,24;UBERON:0004139,6.55e-33,24;UBERON:0004291,6.55e-33,24;UBERON:0004151,2.30e-30,3;UBERON:0003978,4.17e-30,3;UBERON:0009751,4.17e-30,3;UBERON:0000946,4.17e-30,3;UBERON:0002523,4.17e-30,3;UBERON:0005983,4.17e-30,3;UBERON:0002165,4.17e-30,3;UBERON:0002062,4.17e-30,3;UBERON:0007280,4.17e-30,3;UBERON:0003103,5.95e-26,68;UBERON:0002079,1.34e-23,1;UBERON:0002146,2.62e-23,1;UBERON:0005623,2.62e-23,1;UBERON:0002084,3.28e-23,1;UBERON:0002082,3.28e-23,1;UBERON:0010226,3.28e-23,1;UBERON:0002135,4.10e-23,1;UBERON:0001009,1.04e-15,112;UBERON:0004797,1.58e-13,7;UBERON:0002081,1.65e-12,2;UBERON:0010227,1.65e-12,2;UBERON:0002133,2.90e-12,2;UBERON:0010313,9.24e-10,10;UBERON:0002342,9.24e-10,10;UBERON:0005062,9.24e-10,10;UBERON:0004872,1.45e-09,83;UBERON:0007023,2.41e-09,114;UBERON:0004535,2.90e-07,109;UBERON:0003914,9.28e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24271040056923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.09918963689537,11.2288607765725,0,6.38972801596772,12.4475553959606,14.2829732762798,73.1628015380449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,32.8759850131749,8.60719561475061,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p1@LRRC10 | |||
}} |
Revision as of 14:36, 11 January 2014
Short description: | p1@LRRC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRC10_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 247bp_to_ENST00000361484, NM_201550, uc001svc.2_5end |
EntrezGene: | LRRC10 |
HGNC: | 20264 |
UniProt: | Q5BKY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.53e-44 | 2 |
vascular disease | 5.13e-23 | 1 |
ischemia | 5.13e-23 | 1 |
extrinsic cardiomyopathy | 5.13e-23 | 1 |
myocardial ischemia | 5.13e-23 | 1 |
myocardial infarction | 5.13e-23 | 1 |
cardiovascular system disease | 7.18e-23 | 4 |