FFCP PHASE1:Hg19::chr12:68758975..68758989,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr12:68758975..68758989,- | |||
|id=chr12:68758975..68758989,- | |||
|ontology_enrichment_celltype=CL:0002393!1.20e-42!9;CL:0002397!1.20e-42!9;CL:0002057!7.21e-41!42;CL:0000860!7.92e-38!45;CL:0000738!4.39e-34!140;CL:0002087!5.22e-31!119;CL:0000766!2.22e-30!76;CL:0000037!3.58e-30!172;CL:0000566!3.58e-30!172;CL:0000988!4.16e-28!182;CL:0002194!6.09e-28!63;CL:0000576!6.09e-28!63;CL:0000040!6.09e-28!63;CL:0000559!6.09e-28!63;CL:0002009!6.05e-27!65;CL:0000839!1.06e-24!70;CL:0000557!2.75e-24!71;CL:0002031!2.87e-23!124;CL:0002032!2.49e-22!165;CL:0000837!2.49e-22!165;CL:0000763!9.97e-21!112;CL:0000049!9.97e-21!112;CL:0000767!5.91e-16!3;CL:0000875!3.09e-15!3;CL:0002396!3.09e-15!3;CL:0000842!7.64e-15!3;CL:0000134!2.21e-14!358;CL:0002320!5.96e-14!365;CL:0000219!1.96e-12!390;CL:0000048!1.80e-11!430;CL:0000224!2.95e-11!4;CL:0000723!3.36e-11!436;CL:0000034!7.51e-11!444;CL:0000080!1.19e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000767;7.93e-55;3!CL:0002393;1.66e-48;6!CL:0002397;1.66e-48;6!CL:0000094;4.35e-21;8!CL:0000081;1.56e-15;11!CL:0000766;6.56e-12;69!CL:0000576;2.53e-08;48!CL:0000226;2.97e-07;3!CL:0000875;2.97e-07;3!CL:0000784;2.97e-07;3!CL:0000842;2.97e-07;3!CL:0002396;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,8.69e-55,3;CL:0002393,4.16e-50,9;CL:0002397,4.16e-50,9;CL:0000094,4.50e-21,8;CL:0000766,1.61e-19,72;CL:0000081,1.60e-15,11;CL:0000860,2.25e-15,42;CL:0002057,2.25e-15,42;CL:0000738,2.78e-15,136;CL:0000473,1.93e-13,48;CL:0000234,1.93e-13,48;CL:0000763,6.75e-13,108;CL:0000049,6.75e-13,108;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0002194,1.00e-10,59;CL:0000576,1.00e-10,59;CL:0000040,1.00e-10,59;CL:0000559,1.00e-10,59;CL:0002009,2.24e-10,61;CL:0000839,1.37e-09,66;CL:0000557,1.91e-09,67;CL:0002032,1.81e-08,161;CL:0000837,1.81e-08,161;CL:0002087,2.80e-07,115;CL:0000784,2.97e-07,3;CL:0000875,3.16e-07,3;CL:0002396,3.16e-07,3;CL:0000226,3.35e-07,3;CL:0000842,3.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.50e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.66e-26!80;UBERON:0002390!2.96e-25!102;UBERON:0003061!2.96e-25!102;UBERON:0001474!1.35e-23!86;UBERON:0002193!1.73e-22!112;UBERON:0004765!2.46e-19!101;UBERON:0001434!2.46e-19!101;UBERON:0002405!2.32e-16!115;UBERON:0002384!2.30e-13!375;UBERON:0003081!7.22e-12!216;UBERON:0002204!9.86e-11!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.34e-08,98;UBERON:0003061,1.34e-08,98;UBERON:0002371,2.56e-08,76;UBERON:0002193,8.98e-08,108;UBERON:0001474,1.06e-07,82;UBERON:0004765,5.27e-07,90;UBERON:0002405,8.98e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,2.30297638858328,6.19264493264304,0,0,0,0,0,0.587200878669695,3.32397245119126,3.00816671205213,6.2933152507597,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0.28769239232215,0,0,1.37898272294647,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0.434377689410233,0,0,0.632924774881769,0.211255286311942,0.425208599930087,1.46761051855863,0,0.450530678524519,0.803627933485401,1.14005097496499,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:68758975..68758989,- | |||
}} |
Revision as of 14:30, 11 January 2014
Short description: | p@chr12:68758975..68758989, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:68758975..68758989, - |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 8.69e-55 | 3 |
intermediate monocyte | 4.16e-50 | 9 |
CD14-positive, CD16-positive monocyte | 4.16e-50 | 9 |
granulocyte | 4.50e-21 | 8 |
myeloid leukocyte | 1.61e-19 | 72 |
blood cell | 1.60e-15 | 11 |
classical monocyte | 2.25e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.25e-15 | 42 |
leukocyte | 2.78e-15 | 136 |
defensive cell | 1.93e-13 | 48 |
phagocyte | 1.93e-13 | 48 |
myeloid cell | 6.75e-13 | 108 |
common myeloid progenitor | 6.75e-13 | 108 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
monopoietic cell | 1.00e-10 | 59 |
monocyte | 1.00e-10 | 59 |
monoblast | 1.00e-10 | 59 |
promonocyte | 1.00e-10 | 59 |
macrophage dendritic cell progenitor | 2.24e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.37e-09 | 66 |
granulocyte monocyte progenitor cell | 1.91e-09 | 67 |
hematopoietic oligopotent progenitor cell | 1.81e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.81e-08 | 161 |
nongranular leukocyte | 2.80e-07 | 115 |
plasmacytoid dendritic cell | 2.97e-07 | 3 |
non-classical monocyte | 3.16e-07 | 3 |
CD14-low, CD16-positive monocyte | 3.16e-07 | 3 |
single nucleate cell | 3.35e-07 | 3 |
mononuclear cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.34e-08 | 98 |
blood island | 1.34e-08 | 98 |
bone marrow | 2.56e-08 | 76 |
hemolymphoid system | 8.98e-08 | 108 |
bone element | 1.06e-07 | 82 |
skeletal element | 5.27e-07 | 90 |
immune system | 8.98e-07 | 93 |