FFCP PHASE1:Hg19::chr12:66237202..66237219,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3318 | |||
|description=CAGE_peak_at_chr12:66237202..66237219,+ | |||
|id=chr12:66237202..66237219,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.14e-12!180;CL:0000057!1.22e-08!75;CL:0002620!1.26e-08!23;CL:0000012!1.36e-08!682;CL:0000548!1.57e-08!679;CL:0000004!1.57e-08!679;CL:0000255!1.57e-08!679;CL:0000188!3.24e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000680;2.93e-16;7!CL:0000594;1.35e-10;3!CL:0000064;1.15e-09;3!CL:0000067;1.15e-09;3!CL:0005012;1.15e-09;3!CL:0002304;1.15e-09;3!CL:0000188;1.15e-08;9!CL:0000056;9.32e-08;4!CL:1000306;9.88e-08;4!CL:0002547;9.88e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000594,9.46e-11,3;CL:0000064,5.39e-10,3;CL:0000067,5.39e-10,3;CL:0005012,5.39e-10,3;CL:0002304,5.39e-10,3;CL:0000188,1.15e-08,9;CL:0000515,1.30e-07,4;CL:1000306,1.49e-07,4;CL:0002547,1.49e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;9.32e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!8.67e-09!14;DOID:120!4.40e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.40e-10;14!DOID:201;3.11e-08;6!DOID:0060100;3.11e-08;6!DOID:120;9.16e-08;27!DOID:193;4.08e-07;29!DOID:4231;5.43e-07;2!DOID:1907;5.43e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.86e-10,14;DOID:201,3.08e-08,6;DOID:0060100,3.08e-08,6;DOID:120,7.05e-08,27;DOID:193,3.21e-07,29;DOID:4231,6.01e-07,2;DOID:1907,6.01e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.37e-09!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.15e-09;3!UBERON:0001775;1.15e-09;3!UBERON:0001134;6.80e-09;16!UBERON:0002036;6.80e-09;16!UBERON:0004797;9.88e-08;4!UBERON:0000415;9.88e-08;4!UBERON:0007240;9.88e-08;4!UBERON:0005742;9.88e-08;4!UBERON:0005734;9.88e-08;4!UBERON:0004664;9.88e-08;4!UBERON:0004663;9.88e-08;4!UBERON:0002119;1.20e-07;4!UBERON:0000488;2.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,5.39e-10,3;UBERON:0001775,5.39e-10,3;UBERON:0002119,6.34e-08,4;UBERON:0000488,1.36e-07,4;UBERON:0000415,1.49e-07,4;UBERON:0007240,1.49e-07,4;UBERON:0005742,1.49e-07,4;UBERON:0005734,1.49e-07,4;UBERON:0004664,1.49e-07,4;UBERON:0004663,1.49e-07,4;UBERON:0006876,9.76e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0.821246550437305,0.627713197974014,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,1.60709189178915,1.55210578223795,1.49319135678314,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,1.06729878806013,0.33472061276467,0,0,0,0,0,0.625098097988558,0.44905874525234,0.337834441449967,0,0,0,0,0,0,0.496971951695318,0.25326102332916,3.83986624358335,1.43418310374407,1.06400514659507,0,1.06748995729705,0,0,0.134710672069688,1.9615428373615,0,0,0,0,0,0.747243402759005,0.23486899728753,0.971237666208789,0.842704840213491,0.408308342509787,3.93069815397658,0,0,0,0,0,1.34668891163253,2.12701483782339,0.554128230968366,0,0.30648779579902,0.300476117813194,0,0.538168907066586,0,0.211931901159562,0.600182192168805,0.103052529238439,0.515281080091258,0.37223371266318,2.70042131586026,0,1.51460264546469,0.552299391853796,0.161646056818812,0.355009592516614,0.302256294682921,0.169560592310488,0.773043412653187,2.45471508531751,0.860413786167011,0.121973706129595,0.132529768321485,0.232387885739037,0.310983165046111,0.252320850875628,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,1.32438929824395,0.245976877086227,0.343135620597051,0.109750285408626,0,0.603173834469785,0.277765335475589,0,0,0,0,0.117408694235822,0,0,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0.567100388969546,0.358234090811393,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.775630294546667,0,0.845302752556,0.26593811658487,2.08014873822732,0.257207374262142,0,0,0,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0.602878754119172,0,0.099972991182057,0,0,0,0.479249710983165,0,1.42636905040718,1.15825045334063,6.98619496671304,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0.157702415033935,0.234282829985426,0,0,0,0,0.368738337083406,1.21637060255316,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.308419387605311,0.355123450626254,0.328508624055237,0,0.116210378459959,0.241718899183244,2.40607764363942,0.368323955743585,0.114814448164607,0.910455840033585,0.262248829918848,0,0.15403067420883,0,0,0.211103257785751,0,0,0.647747748306418,0,0,0,0.254876273045038,0,0,0.438519753291869,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.924291702687866,0.307007349452259,1.24052915236078,2.0409846524972,1.88521702088497,3.06815858697963,0.0890320356467374,0,0.192190067365106,15.0583000743609,0,0,1.5740617341532,0,0,0,0,0,0.143124886741991,1.48863347743867,1.2655176988749,0.571890581771475,0,0,0,0,0.539617372749944,0.274537029736055,0.589062011728432,0,0,0,0,0.974853958525138,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,1.38871292465715,0,0,0,0,0,0,0.59873811429845,0,1.90506224451495,0.324621940274555,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,1.42068073403207,0,0,0,0,0,1.11308705022906,0,0.844501632511974,0,0,0,0.20453736500431,0,0.311039587661807,1.52776196950456,0,0,0,0,0,0,0,0,0,0,0,1.365521379426,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26598838716816,0.326465616318295,0,0.216388639742091,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0.313932918407225,0,0,1.38674673013139,0,0,0.0870592065804026,0,2.92376255201748,0.0967563312890851,0,0,0,1.235585773681,0,0.959293472527256,1.78843150532691,0,0,0.0801588202515337,0,0,0.288180834308212,1.03082936549324,0,0.432164393964449,0.621262677827163,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0.720599767084807,0,0.787831823072237,0.659326867049332,0.337017719270924,0.0984274815147488,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830091809617385,1.8747061194316,0.151649117541648,0,0.705797459094515,0,0,0.447764408660622,0,1.10961172300523,0.378806010550178,1.0062716070103,1.77962244319307,0,0.604923695052956,0.15543720058278,1.03498604992744,0.796483835818512,1.79921244865442,2.17368139626763,1.65882483136342,0.797525143673985,2.08698024724694,0.450772826991655,1.90402606084398,0,1.27294061441792,0.322231671127465,0.928067519756987,2.78667122089031,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0.706756583783524,0.38582807654183,0,0,0,0,0,0,0,0,0.655219697692825,0.491545817507439,0,0,0.106691729694141,0,1.13503190713367,1.65695355226657,0,0.622077260032973,0,0,0.157265941855896,0,0,0,0.991486114072017,0,0,0.55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| |||
|short_description=p@chr12:66237202..66237219,+ | |||
}} |
Revision as of 14:27, 11 January 2014
Short description: | p@chr12:66237202..66237219, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:66237202..66237219, + |
Coexpression cluster: | C3318_Small_Myoblast_Fibroblast_retinoblastoma_mesenchymal_prostate_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle satellite cell | 9.46e-11 | 3 |
ciliated cell | 5.39e-10 | 3 |
ciliated epithelial cell | 5.39e-10 | 3 |
multi-ciliated epithelial cell | 5.39e-10 | 3 |
non-pigmented ciliary epithelial cell | 5.39e-10 | 3 |
cell of skeletal muscle | 1.15e-08 | 9 |
skeletal muscle myoblast | 1.30e-07 | 4 |
fibroblast of tunica adventitia of artery | 1.49e-07 | 4 |
fibroblast of the aortic adventitia | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 5.39e-10 | 3 |
ciliary body | 5.39e-10 | 3 |
left ovary | 6.34e-08 | 4 |
atypical epithelium | 1.36e-07 | 4 |
artery wall | 1.49e-07 | 4 |
tunica adventitia of artery | 1.49e-07 | 4 |
adventitia | 1.49e-07 | 4 |
tunica adventitia of blood vessel | 1.49e-07 | 4 |
aorta tunica adventitia | 1.49e-07 | 4 |
aorta wall | 1.49e-07 | 4 |
vasculature of organ | 9.76e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.86e-10 | 14 |
connective tissue cancer | 3.08e-08 | 6 |
musculoskeletal system cancer | 3.08e-08 | 6 |
female reproductive organ cancer | 7.05e-08 | 27 |
reproductive organ cancer | 3.21e-07 | 29 |
histiocytoma | 6.01e-07 | 2 |
malignant fibroxanthoma | 6.01e-07 | 2 |