FFCP PHASE1:Hg19::chr12:56881993..56882009,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27165 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29570 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z8Q9 | |||
|association_with_transcript=23bp_to_ENST00000486896_5end | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_5_at_GLS2_5end | |||
|id=chr12:56881993..56882009,- | |||
|ontology_enrichment_celltype=CL:0002322!1.91e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.29e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.29e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.31e-27;3!UBERON:0004161;2.92e-08;11!UBERON:0009497;4.00e-07;13 | |||
|ontology_enrichment_disease=DOID:305!6.40e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.38e-25!57;UBERON:0005068!9.38e-25!57;UBERON:0006241!9.38e-25!57;UBERON:0007135!9.38e-25!57;UBERON:0001017!3.55e-23!82;UBERON:0005743!1.20e-21!86;UBERON:0002616!4.64e-20!59;UBERON:0000073!6.36e-20!94;UBERON:0001016!6.36e-20!94;UBERON:0003075!5.56e-19!86;UBERON:0007284!5.56e-19!86;UBERON:0000955!1.69e-18!69;UBERON:0006238!1.69e-18!69;UBERON:0001869!5.45e-18!32;UBERON:0002346!1.00e-17!90;UBERON:0001893!1.16e-16!34;UBERON:0002020!1.36e-16!34;UBERON:0003528!1.36e-16!34;UBERON:0002791!2.35e-15!33;UBERON:0007023!4.07e-15!115;UBERON:0002780!1.16e-14!41;UBERON:0001890!1.16e-14!41;UBERON:0006240!1.16e-14!41;UBERON:0001950!3.33e-14!20;UBERON:0003080!3.40e-14!42;UBERON:0003076!6.84e-13!15;UBERON:0003057!6.84e-13!15;UBERON:0002619!1.10e-12!22;UBERON:0004121!3.26e-11!169;UBERON:0000956!7.50e-11!25;UBERON:0000203!7.50e-11!25;UBERON:0004733!1.03e-10!12;UBERON:0002028!1.03e-10!12;UBERON:0007277!1.03e-10!12;UBERON:0000924!1.03e-10!173;UBERON:0006601!1.03e-10!173;UBERON:0000025!1.11e-10!194;UBERON:0002420!1.62e-10!9;UBERON:0007245!1.62e-10!9;UBERON:0010009!1.62e-10!9;UBERON:0010011!1.62e-10!9;UBERON:0000454!1.62e-10!9;UBERON:0004732!9.10e-10!13;UBERON:0001871!2.28e-09!7;UBERON:0003056!2.33e-09!61;UBERON:0000200!5.70e-09!6;UBERON:0000033!1.39e-08!123;UBERON:0004111!4.66e-08!241;UBERON:0000483!4.70e-08!309;UBERON:0000119!7.52e-08!312;UBERON:0000153!7.68e-08!129;UBERON:0007811!7.68e-08!129;UBERON:0002308!1.55e-07!9;UBERON:0000125!1.55e-07!9;UBERON:0002771!2.09e-07!3;UBERON:0009663!4.30e-07!7;UBERON:0001896!6.08e-07!3;UBERON:0005290!6.08e-07!3;UBERON:0010096!6.08e-07!3;UBERON:0009497!9.54e-07!25;UBERON:0000015!9.54e-07!25;UBERON:0002423!9.54e-07!25;UBERON:0006235!9.54e-07!25;UBERON:0004161!9.54e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.18e-17;19!UBERON:0006925;3.18e-17;19!UBERON:0002037;4.84e-14;6!UBERON:0002423;3.43e-13;25!UBERON:0002365;1.31e-10;31!UBERON:0002330;1.31e-10;31!UBERON:0002680;1.10e-09;9!UBERON:0001895;1.10e-09;9!UBERON:0002368;5.59e-09;33!UBERON:0005172;3.54e-08;52!UBERON:0005173;3.54e-08;52!UBERON:0004733;1.73e-07;12!UBERON:0002028;1.73e-07;12!UBERON:0004732;5.59e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.18e-17,19;UBERON:0006925,3.18e-17,19;UBERON:0008836,3.18e-17,19;UBERON:0008835,6.20e-15,22;UBERON:0003894,6.20e-15,22;UBERON:0009854,2.65e-14,23;UBERON:0002037,4.24e-14,6;UBERON:0006215,4.24e-14,6;UBERON:0007499,3.44e-13,25;UBERON:0009497,3.44e-13,25;UBERON:0000015,3.44e-13,25;UBERON:0002423,3.44e-13,25;UBERON:0006235,3.44e-13,25;UBERON:0004161,3.44e-13,25;UBERON:0009856,1.07e-12,26;UBERON:0002365,1.04e-10,31;UBERON:0002330,1.04e-10,31;UBERON:0002680,1.01e-09,9;UBERON:0001895,1.01e-09,9;UBERON:0010092,1.01e-09,9;UBERON:0002368,1.60e-09,35;UBERON:0005172,2.36e-09,54;UBERON:0005173,2.36e-09,54;UBERON:0002417,2.00e-08,60;UBERON:0000916,2.00e-08,60;UBERON:0004733,1.62e-07,12;UBERON:0002028,1.62e-07,12;UBERON:0007277,1.62e-07,12;UBERON:0000949,1.79e-07,45;UBERON:0004732,5.26e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.580969714347592,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.8159062679296,0,2.36315962672562,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1048079335219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4877667607933,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0.606802608747567,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,1.52581736317083,1.54810963903714,0.295547618953547,0.87754158861589,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0.176512253383001,0,0,0,0.126621591911757,0,0.0801588202515337,0,0,0.576361668616424,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0.273810757783986,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0,0,0.157566364614447,0,0.26961417541674,0.0984274815147488,0,0,0,0.643012593860077,1.10031549277787,0.83088067605837,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8017756014863,29.1515155606887,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.500763722825999,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.615349092722265,0,0.138314504928436,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0.781514011233092,0,0,0.147856086217045,0.202612753855184,0,0.413373593002368,0.317079050969534,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.815636795721981,0.197318320688547,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0.223710863595585,0.098150233615243,0.121917924982269,0,0,0,0,0.467878926924211,0,0.118920090777569,0.11294608203896,0,0.754814217833368,0,0,0,0,0.235676547101626,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0.275684698604535,0.752122617877125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@GLS2 | |||
}} |
Revision as of 14:03, 11 January 2014
Short description: | p5@GLS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GLS2_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | 23bp_to_ENST00000486896_5end |
EntrezGene: | GLS2 |
HGNC: | 29570 |
UniProt: | B7Z8Q9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.29e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.18e-17 | 19 |
digestive gland | 3.18e-17 | 19 |
liver bud | 3.18e-17 | 19 |
hepatic diverticulum | 6.20e-15 | 22 |
liver primordium | 6.20e-15 | 22 |
digestive tract diverticulum | 2.65e-14 | 23 |
cerebellum | 4.24e-14 | 6 |
rhombic lip | 4.24e-14 | 6 |
epithelial sac | 3.44e-13 | 25 |
epithelium of foregut-midgut junction | 3.44e-13 | 25 |
anatomical boundary | 3.44e-13 | 25 |
hepatobiliary system | 3.44e-13 | 25 |
foregut-midgut junction | 3.44e-13 | 25 |
septum transversum | 3.44e-13 | 25 |
sac | 1.07e-12 | 26 |
exocrine gland | 1.04e-10 | 31 |
exocrine system | 1.04e-10 | 31 |
regional part of metencephalon | 1.01e-09 | 9 |
metencephalon | 1.01e-09 | 9 |
future metencephalon | 1.01e-09 | 9 |
endocrine gland | 1.60e-09 | 35 |
abdomen element | 2.36e-09 | 54 |
abdominal segment element | 2.36e-09 | 54 |
abdominal segment of trunk | 2.00e-08 | 60 |
abdomen | 2.00e-08 | 60 |
segmental subdivision of hindbrain | 1.62e-07 | 12 |
hindbrain | 1.62e-07 | 12 |
presumptive hindbrain | 1.62e-07 | 12 |
endocrine system | 1.79e-07 | 45 |
segmental subdivision of nervous system | 5.26e-07 | 13 |