FFCP PHASE1:Hg19::chr12:56123450..56123469,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=967 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1692 | |||
|TSSclassifier=strong | |||
|UniProt=F8VNT9 | |||
|association_with_transcript=-6bp_to_ENST00000546457,uc001shp.2_5end | |||
|description=CAGE_peak_5_at_CD63_5end | |||
|id=chr12:56123450..56123469,- | |||
|ontology_enrichment_celltype=CL:0000860!2.39e-08!45;CL:0002057!4.51e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.22e-09;33!CL:0002057;3.22e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.68e-08,42;CL:0002057,5.68e-08,42;CL:0000473,9.96e-07,48;CL:0000234,9.96e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.81e-12!659;UBERON:0000922!4.02e-10!612;UBERON:0002619!8.54e-10!22;UBERON:0000467!2.47e-09!625;UBERON:0000923!4.51e-09!604;UBERON:0005291!4.51e-09!604;UBERON:0006598!4.51e-09!604;UBERON:0002532!4.51e-09!604;UBERON:0001893!4.71e-09!34;UBERON:0000480!4.75e-09!626;UBERON:0002050!6.04e-09!605;UBERON:0005423!6.04e-09!605;UBERON:0001950!7.32e-09!20;UBERON:0002791!1.60e-08!33;UBERON:0002020!1.64e-08!34;UBERON:0003528!1.64e-08!34;UBERON:0001869!1.67e-08!32;UBERON:0000956!2.67e-08!25;UBERON:0000203!2.67e-08!25;UBERON:0002780!8.10e-08!41;UBERON:0001890!8.10e-08!41;UBERON:0006240!8.10e-08!41;UBERON:0003080!1.10e-07!42;UBERON:0001049!3.79e-07!57;UBERON:0005068!3.79e-07!57;UBERON:0006241!3.79e-07!57;UBERON:0007135!3.79e-07!57;UBERON:0000924!8.19e-07!173;UBERON:0006601!8.19e-07!173;UBERON:0000025!9.90e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.12e-10;22!UBERON:0001950;1.76e-09;20!UBERON:0000956;7.93e-09;25!UBERON:0000203;7.93e-09;25!UBERON:0001893;1.25e-08;34!UBERON:0001869;1.98e-08;32!UBERON:0002791;2.40e-08;32!UBERON:0003528;3.44e-08;34!UBERON:0002020;3.44e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.86e-10,22;UBERON:0001893,1.00e-09,34;UBERON:0001950,3.62e-09,20;UBERON:0001869,3.76e-09,32;UBERON:0003528,3.78e-09,34;UBERON:0002020,3.78e-09,34;UBERON:0002791,4.67e-09,32;UBERON:0000922,1.36e-08,592;UBERON:0000956,1.61e-08,25;UBERON:0000203,1.61e-08,25;UBERON:0002780,2.29e-08,41;UBERON:0001890,2.29e-08,41;UBERON:0003080,2.29e-08,41;UBERON:0006240,2.29e-08,41;UBERON:0000073,1.47e-07,53;UBERON:0002616,1.47e-07,53;UBERON:0001049,1.52e-07,56;UBERON:0005068,1.52e-07,56;UBERON:0006241,1.52e-07,56;UBERON:0007135,1.52e-07,56;UBERON:0005423,4.29e-07,581;UBERON:0000923,4.46e-07,560;UBERON:0010316,4.46e-07,560;UBERON:0005291,4.46e-07,560;UBERON:0006598,4.46e-07,560;UBERON:0010317,4.46e-07,560;UBERON:0002532,4.46e-07,560;UBERON:0001016,5.00e-07,89;UBERON:0004121,5.72e-07,171;UBERON:0000924,5.72e-07,171;UBERON:0006601,5.72e-07,171;UBERON:0000025,6.40e-07,192;UBERON:0002050,7.45e-07,564;UBERON:0004111,9.94e-07,240 | |||
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| |||
|short_description=p5@CD63 | |||
}} |
Revision as of 13:55, 11 January 2014
Short description: | p5@CD63 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CD63_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000546457, uc001shp.2_5end |
EntrezGene: | CD63 |
HGNC: | 1692 |
UniProt: | F8VNT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.68e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.68e-08 | 42 |
defensive cell | 9.96e-07 | 48 |
phagocyte | 9.96e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 3.86e-10 | 22 |
telencephalon | 1.00e-09 | 34 |
neocortex | 3.62e-09 | 20 |
cerebral hemisphere | 3.76e-09 | 32 |
brain grey matter | 3.78e-09 | 34 |
gray matter | 3.78e-09 | 34 |
regional part of telencephalon | 4.67e-09 | 32 |
embryo | 1.36e-08 | 592 |
cerebral cortex | 1.61e-08 | 25 |
pallium | 1.61e-08 | 25 |
regional part of forebrain | 2.29e-08 | 41 |
forebrain | 2.29e-08 | 41 |
anterior neural tube | 2.29e-08 | 41 |
future forebrain | 2.29e-08 | 41 |
regional part of nervous system | 1.47e-07 | 53 |
regional part of brain | 1.47e-07 | 53 |
neural tube | 1.52e-07 | 56 |
neural rod | 1.52e-07 | 56 |
future spinal cord | 1.52e-07 | 56 |
neural keel | 1.52e-07 | 56 |
developing anatomical structure | 4.29e-07 | 581 |
germ layer | 4.46e-07 | 560 |
germ layer / neural crest | 4.46e-07 | 560 |
embryonic tissue | 4.46e-07 | 560 |
presumptive structure | 4.46e-07 | 560 |
germ layer / neural crest derived structure | 4.46e-07 | 560 |
epiblast (generic) | 4.46e-07 | 560 |
nervous system | 5.00e-07 | 89 |
ectoderm-derived structure | 5.72e-07 | 171 |
ectoderm | 5.72e-07 | 171 |
presumptive ectoderm | 5.72e-07 | 171 |
tube | 6.40e-07 | 192 |
embryonic structure | 7.45e-07 | 564 |
anatomical conduit | 9.94e-07 | 240 |