FFCP PHASE1:Hg19::chr12:53835487..53835498,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54458 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24528 | |||
|TSSclassifier=strong | |||
|UniProt=F8VRX0 | |||
|association_with_transcript=-17bp_to_ENST00000551003_5end | |||
|description=CAGE_peak_3_at_PRR13_5end | |||
|id=chr12:53835487..53835498,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.40e-13!115;UBERON:0001049!3.06e-07!57;UBERON:0005068!3.06e-07!57;UBERON:0006241!3.06e-07!57;UBERON:0007135!3.06e-07!57;UBERON:0002616!9.17e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.70e-13,114;UBERON:0001049,1.62e-07,56;UBERON:0005068,1.62e-07,56;UBERON:0006241,1.62e-07,56;UBERON:0007135,1.62e-07,56;UBERON:0000073,2.89e-07,53;UBERON:0002616,2.89e-07,53 | |||
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| |||
|short_description=p3@PRR13 | |||
}} |
Revision as of 13:44, 11 January 2014
Short description: | p3@PRR13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRR13_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000551003_5end |
EntrezGene: | PRR13 |
HGNC: | 24528 |
UniProt: | F8VRX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.70e-13 | 114 |
neural tube | 1.62e-07 | 56 |
neural rod | 1.62e-07 | 56 |
future spinal cord | 1.62e-07 | 56 |
neural keel | 1.62e-07 | 56 |
regional part of nervous system | 2.89e-07 | 53 |
regional part of brain | 2.89e-07 | 53 |