FFCP PHASE1:Hg19::chr12:50146826..50146836,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=7009 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11723 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=5bp_to_ENST00000553022_5end | |||
|description=CAGE_peak_11_at_TMBIM6_5end | |||
|id=chr12:50146826..50146836,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.98e-13!42;CL:0000860!3.52e-13!45;CL:0002009!3.86e-12!65;CL:0002194!1.27e-11!63;CL:0000576!1.27e-11!63;CL:0000040!1.27e-11!63;CL:0000559!1.27e-11!63;CL:0000839!1.71e-09!70;CL:0000557!1.90e-09!71;CL:0000766!2.07e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.78e-15;33!CL:0002057;1.78e-15;33!CL:0000473;1.95e-14;39!CL:0000234;1.95e-14;39!CL:0000576;1.24e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.91e-18,48;CL:0000234,5.91e-18,48;CL:0000860,8.19e-16,42;CL:0002057,8.19e-16,42;CL:0002009,5.33e-14,61;CL:0002194,2.45e-13,59;CL:0000576,2.45e-13,59;CL:0000040,2.45e-13,59;CL:0000559,2.45e-13,59;CL:0000557,2.84e-11,67;CL:0000839,6.26e-11,66;CL:0000766,6.48e-11,72 | |||
|ontology_enrichment_development_v019=CL:0002057;6.98e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.21e-08!80;UBERON:0002204!4.23e-08!167;UBERON:0004765!1.84e-07!101;UBERON:0001434!1.84e-07!101;UBERON:0001474!3.66e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.10e-10,76;UBERON:0001474,3.12e-09,82;UBERON:0002204,7.12e-09,167;UBERON:0004765,1.97e-08,90;UBERON:0001434,2.49e-08,100;UBERON:0003081,5.57e-07,203;UBERON:0002390,5.65e-07,98;UBERON:0003061,5.65e-07,98;UBERON:0000926,6.03e-07,315;UBERON:0004120,6.03e-07,315;UBERON:0006603,6.03e-07,315 | |||
|phase1_expression=0.54503513781167,4.49611100171065,0.422863212287913,4.00293193412522,3.12872766099101,8.72338524100369,5.06599756336621,1.26343974685366,1.04474251279935,0.737201809504527,0,0.218441372130172,0.791300934685361,0.990130823680373,1.98838425436749,6.05092631806598,2.41077811209591,1.46062018077475,2.43966399395253,0.984968464614303,1.22400414746552,1.88072832886853,0.286235987131057,0.684372125364421,1.12988375635323,0.382067028739756,0.164201178899891,0.0787107813136792,0.786728553697808,1.53531759238885,0.309632246632152,0.919421224478927,2.71085326900425,4.43704812200145,0.0774672005803016,0.142169232487422,0.293600439334847,0,0.802177789880567,0.217010870715852,1.11957737119962,0.32389366601898,1.54545340580512,3.34415949192999,2.26725566213286,2.18325655069035,2.55671940596253,3.70051099219643,1.85823822537062,2.8769239232215,2.56160706529101,4.96612682766029,1.37898272294647,1.93645405075148,4.06279459783025,2.63539275359647,3.547779950752,5.16864014223695,5.81559395504715,2.24650318953266,1.27867425159808,4.94776950280074,1.79517291859469,1.27867425159808,2.03146467040009,5.10646702222026,3.11411124497787,2.26123798731069,6.25779502104242,3.04064382587163,3.02699751316684,3.31449872388808,3.48108626184973,3.80259515361495,2.55125159958052,1.25795187305026,1.01095768031846,0.600707571366025,0.964353520182481,1.71007646244749,2.78483348078726,0.730656615058536,0,0,0,0,0,0,0,0.954053754535364,0,0,1.14681968437569,0,0.560508562981536,0,0.393419540227666,0.393010762749165,0.616804496998528,1.5046784585161,0.32592226663359,0.473447805734733,3.89653456815823,1.44833593950726,1.47302953737419,1.77227115666897,0.812411591295047,1.15282187753108,1.1705341280389,1.47994114143309,2.48715016007264,1.15921234294021,1.03800594213442,0.267540828089713,0,1.13309342697566,0.766440987203842,1.03088233644789,1.01207876807801,0,0,1.90090408889675,1.20460095262218,1.02389288923535,0,0.473554504088034,0.821127996921047,0.201606743224732,1.33720097891754,0.289648807765598,0,1.34140171940727,0.639312809217652,0.722878304769133,1.50401373190767,0.434539556882471,0,0.973269740605272,0.472674085820339,0.443458794925128,0.702678285545008,0.261958150995425,0.728590576585084,2.22470665670658,0.97364218096405,0.696518949197069,2.39324328933957,0.953962497221368,0,0.371457501329565,0.596287222100115,0,0,0,0.419499436209906,0.550236083880135,1.67195973229448,0.775250277507987,0,0,1.20848795132744,0,0.732186172644509,0.735326160691737,3.24056779152704,0.267899184852239,0.673588117878509,0.337834441449967,1.53316637465883,0,0.732806975721629,1.31780417436063,0,0.872188104285069,1.49091585508596,0.506522046658319,0.264818361626438,4.87622255272983,1.41867352879343,2.24271040056923,1.06748995729705,1.48000529050296,0,2.42479209725439,1.63461903113459,0.454072282934794,1.15235184896,0,0.936480230490962,0,0.597794722207204,1.76151747965647,1.61872944368132,2.38766371393822,0.204154171254893,1.35117749042945,1.03325781175765,1.18800285728205,1.97813543422845,0.910161361938026,0,0.505008341862199,1.12606667884768,0,0.438977620880838,3.0648779579902,0.751190294532984,0.907457465280168,0.89694817844431,0.640672166455702,0.847727604638247,1.80054657650641,1.23663035086127,0.772921620136887,0.930584281657949,0.675105328965065,1.94874010322397,0.757301322732344,0.460249493211497,1.77810662500693,1.77504796258307,0.906768884048762,0.508681776931463,1.35282597214308,0.272746120590835,0.286804595389004,0.853815942907168,0.530119073285941,1.39432731443422,1.34759371519982,1.26160425437814,2.55484151353081,3.12899064659632,1.28648187638577,2.76269842704961,0.928735856063958,0.721879481669586,1.18306800039844,1.68584690078102,1.20505514941741,2.20587945464788,1.74303555273925,1.66089433377768,1.21348177344148,1.37355025587742,2.30848294167834,3.69077727312324,1.40241773803446,0.8231480226628,1.47008711385542,8.87285243752816,6.87979051674338,3.54473944008842,1.32438929824395,1.10689594688802,0.171567810298526,0.439001141634502,0,0.603173834469785,0,0.651616610620649,0,1.44331342025273,0.463721619900307,0.469634776943287,0.866198686566443,0.925971025153221,0.761016608938393,0,3.43394464837949,1.23108503043699,0.702012795417713,2.22946743433092,0.93733833986777,1.00789276919316,0.992425680696705,0,0.581267877027924,1.91691339582606,0,0.352193736052904,0.414656231081544,0.432359860250884,0.25248486685276,0.317489471460845,0.381988425558278,0,1.71072446022705,1.7480673759565,1.50171528921959,0.571652865261156,0.672786506072164,0.87192013766656,0.36669142910475,0.258543431515556,0,0.845302752556,0,2.08014873822732,0.257207374262142,1.41849132023278,1.0656887160644,0.428933980974443,0,0.823240336780769,0.65147236858747,0,0.791951872933429,0,2.61460037580088,1.59956785891291,9.72990245129524,4.52031382288914,12.6500363689819,1.19812427745791,0,0,0.868687840005475,2.05476322550383,0.179060963239896,0.896681151948218,0.197030760201927,0.646882724578552,0.898401253958239,0,0,1.54657762555539,0.167516265334349,3.82763250991898,2.24702107184155,11.966458368161,0.414415513436035,0.36807447515742,0.500170521059677,1.62759014219841,1.24782516918484,1.96271887676878,0.788512075169673,0.117141414992713,0.300946099727719,2.27407504055985,1.03473071292505,0.664225598535437,0.737476674166813,0.347534457872331,0.587403472388222,1.02943027143257,0.206768026122887,1.07857100409308,0.640365346820666,0.606255142892519,3.32870879020994,2.11673205330776,0.744323423456331,0.306923946576125,4.2099014164961,0.768834895534206,0,0.804269605718038,4.45254199334973,1.23367755042124,1.06537035187876,0.410635780069046,0,1.97557643381931,0.966875596732978,1.00253235151642,1.65745780084613,0.68888668898764,0.546273504020151,1.44236856455367,0.902399225814824,0.847168708148562,0,0,0.316654886678627,3.4120015221269,1.70093705276516,1.0795795805107,0,0,0.501689773854853,0.254876273045038,3.3243040357149,0.223874754722178,0.438519753291869,1.5686127061494,0,0.328014645699706,0,0.721287081534056,0.366277859273374,0.495056999523528,0,0.650060246036521,1.6068392984416,0.290012154876366,2.00263202249038,1.5350367472613,0.964856007391714,0.644521469209642,1.59518363305651,1.02271952899321,0.267096106940212,1.32227932288782,1.34533047155574,0.510450849978337,0.4046311234222,0.929691098594572,5.03699754929024,0,0,0,0,0.74129687641568,3.00562262158182,0.744316738719335,0.949138274156178,0.762520775695299,0,0.42793898803392,0.636406495851874,5.49464048139461,0.359744915166629,1.37268514868027,1.64937363283961,0.808729926293264,1.58510321173008,2.52755073743389,0,1.46228093778771,7.39551027297288,0.682499557039929,2.40389234321312,1.13008116620243,0.551365343546124,1.32687795048244,2.63070531152258,1.73632660280006,1.31178950409327,0.811641507850816,1.8589409885985,2.53526042279017,0.143411352204052,0.196498082026242,1.426684205925,0.709522128141196,1.05553817648832,2.63435914367922,0.379473173765715,0.699869440489966,0.384888450902048,1.34060455107157,2.17781969722645,0.753150406214233,0.86101074534246,0,1.33029046061003,0.689170200620878,1.52234282769651,1.52927441428475,0,0,0.411362273086194,0.648473311192717,1.08006287447623,2.37937552888281,0.106824071127473,0,0.245040215981032,0,0,0.284567373393656,0.478278818186467,0.798317485731266,0.957526850661834,0.635020748171649,1.62310970137278,0.842391534340376,0,0.626719583092093,0,0.50787533340481,0.1605880751037,1.41259795033733,0.851692475380653,1.71752672377882,0,0,0.166849141711909,1.17232857241224,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0.935702702041099,0.73254089635947,0.121360521749513,0.334330152832435,1.13654458722565,1.43246690842614,0.593929361665277,0.921482106297696,0,0.422008249231538,0.333926115068718,0.824019371133798,0.422250816255987,1.59398390600856,0.552567831062295,0.251932747854276,0.20453736500431,0.369254416383208,1.86623752597084,0.269605053441981,0.537063524026827,0.511572370226872,0.887790650732402,0,0,2.90799823828566,0.649376687132959,0,0.520855522170466,0.174919999992391,0.724999575434793,0.910347586283997,0,0.472775363535873,0,0,0.868124974666461,1.77148277162768,0.723578631752448,0,0.110579259931225,0.886642856860642,1.09692698576986,0,0.278847488557207,0.230850775511391,0.455768223388005,0.23056390438806,0.807818799687949,0.434589487688032,3.50901275705111,1.37396390102793,4.26427820814908,3.06579894587209,0.156980256395025,0.166211681900156,0,0.588187602953219,0.671286347903371,0,0.158936578980379,2.3209787098083,1.14262965711403,0.706765357169704,0,0,0.353830258013357,0.611030144933625,0,1.11207545051853,0.417687798021821,0.337005664903385,0,2.57690890297873,1.27718352450966,0.19566461893209,0.242780379534093,1.97292201424695,0,1.83643656978294,0.31593289814244,0.150323419414493,0.311064574191741,0,0.992975867626496,0.627865836814451,0,0,0.693373365065693,2.08271686002157,0.391969589657511,0,1.39781334593624,0.343972064943233,1.9351266257817,0.803982487948041,0.574808199372465,0.872901148395775,0.353024506766001,2.03382666702479,0.822251547880505,0.397429223405979,0.126621591911757,0.586654148204409,0,1.49417096317547,1.39866726707491,0.576361668616424,0.114536596165916,2.74551996579143,0.576219191952599,0.124252535565433,0.471388069233591,0,0,0.305994652908965,0,1.20084057741958,0.684526894459965,0,0.429765441419957,0.788662062837943,0,0,0.717873024576814,1.19807400299395,0.858452096273142,0,0.134366944973453,0.720599767084807,0,0.236349546921671,1.15382201733633,0.13480708770837,1.47641222272123,0.169346664131569,0,0.136203406111576,1.44677833618517,2.33817042215297,7.47792608452533,1.349843349309,2.32140586367385,0.121499113316049,0.670869375198532,1.10327990218877,0.367182116944987,0.105600336519406,1.79287339332845,0.191915197319445,0,0,0,5.42999601753713,5.18532894720761,2.61269888087527,1.19730191562487,0.164185041498678,0.511164065356265,0,0.732761168390412,1.32506888912221,0,0.13223260174269,0,0,0.427149650270779,0.157204305099666,1.24271716604159,1.9846640872478,0.197611631897944,0.243585196761792,0,0,0.5013797880454,0.612691153526923,0.655745261419609,0,0,2.44052529803926,0.751145584238999,2.29363678276028,0.554645257684261,0.18628920882415,0.415045904808692,0,0.606596470166591,0.570930667089935,3.2937214757744,0.468334905806882,0.28984205722165,1.94031243752936,0.934853239388898,1.66441758450784,0,2.26411111577318,1.77962244319307,4.11912123114462,0.604923695052956,1.5543720058278,0.887130899937803,0.477890301491107,3.14862178514523,0.776314784381297,1.24411862352257,1.06336685823198,0,1.05180326298053,3.42724690951916,0.813741466409323,1.27294061441792,0.751873899297419,1.85613503951397,1.19428766609585,1.60011105865261,2.74716564146234,2.69399591012735,1.26184898228651,0.385239660814607,0.214441591374926,2.08795433572169,1.58694147858591,0.694567422971502,1.95789363605174,0.537266523244462,1.54400723580486,1.53498834705095,0.176689145945881,2.50788249752189,0.675769762612291,1.28120759293973,0.690860683462397,0.607719912354764,0.276516872303462,1.36402216187572,0.265729680626726,0.654261577023377,6.22458712808184,1.96618327002975,0,0.39997479170986,0.106691729694141,0.688859918643263,1.13503190713367,0.920529751259204,1.11903606175556,0.622077260032973,0,0.215649622793364,0.786329709279482,0.109209638192014,0.33946505990805,0.850299680406731,1.36329340684902,0,0,0.23658523500376,0.80057074828547,3.52675943690684,2.4499638188256,0,1.41696576325585,0.478901577171454,2.87162909937057,1.76450187355203,0.0691572524642179,1.77623210195036,1.42769420259154,0.196295437002051,0.353909170043221,1.83428598521679,0.577628330751691,0.381382095467167,0,0,0.225630985047772,1.41193548092464,1.56302802246618,0.523813388962845,0.982631505060581,0.147856086217045,0.135075169236789,1.56215619722769,0.826747186004736,0.253663240775627,1.64092442705466,2.74128883428591,0.496211178389294,0.175871244359621,0.766574565837572,0,0.672567444437648,1.82089681270989,0.455324382702595,0.443511850813194,0.576169937778896,0.171488009437418,0.339848664884159,0.328863867814245,0.472775363535873,0,0.470958557103084,0.314231179832004,0.280272163313789,1.82631744101899,1.29556554731173,1.9110067515482,0.214429632529969,0,0.581207126840626,0,0,0.414432328326074,0.51215543128185,0.691259661814092,0.430227358820278,0.473328002922261,0.340853619036631,7.19757985324579,2.7492824225286,1.86123831398592,2.8666168169323,0.894843454382338,0.588901401691458,0.975343399858155,0,0.102662806856247,0,1.94284397223656,0.467878926924211,0.795803100645473,1.9027214524411,0.33883824611688,0.769583617218004,0.301925687133347,0.848915739187391,1.96703604453562,6.1141248526998,1.22574160876953,0,0.981542335574726,0.891139200981258,3.3812458206672,0.339854229375634,0.0939839179798536,0,0.199882311849858,0.178553938605658,2.47026410200984,0.0802413666891683,0.730336388246517,4.12856355064087,0.573358332605805,0.157771562193185,0.0679914901909147,1.30905207102113,4.7612415646386,2.23197010900051,1.38652688589425,5.62414530760926,0.378499274505237,0.327796715891087,1.39368351112581,0.713921808193872,0.26721740526556,0.735159196278759,1.25353769646188,0.303114792872958,2.14371304124943,0,0.20686599172379,2.13233981900981,1.1903221573187,0.258355639344024,0.186224142887574,0.784923038064294,0.763765899337979,1.0105859447911,1.95945073107265,2.39563310759697,0.134704106029175,0.430333232356058,1.99596213927608,0,0.320182037633146,3.8614456457388,0.449126010532934,0,0.244482888365733,1.62758471326295,0.665756774185513,1.81146414231924,0 | |||
|short_description=p11@TMBIM6 | |||
}} |
Revision as of 13:21, 11 January 2014
Short description: | p11@TMBIM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_11_at_TMBIM6_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000553022_5end |
EntrezGene: | TMBIM6 |
HGNC: | 11723 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.91e-18 | 48 |
phagocyte | 5.91e-18 | 48 |
classical monocyte | 8.19e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.19e-16 | 42 |
macrophage dendritic cell progenitor | 5.33e-14 | 61 |
monopoietic cell | 2.45e-13 | 59 |
monocyte | 2.45e-13 | 59 |
monoblast | 2.45e-13 | 59 |
promonocyte | 2.45e-13 | 59 |
granulocyte monocyte progenitor cell | 2.84e-11 | 67 |
myeloid lineage restricted progenitor cell | 6.26e-11 | 66 |
myeloid leukocyte | 6.48e-11 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.10e-10 | 76 |
bone element | 3.12e-09 | 82 |
musculoskeletal system | 7.12e-09 | 167 |
skeletal element | 1.97e-08 | 90 |
skeletal system | 2.49e-08 | 100 |
lateral plate mesoderm | 5.57e-07 | 203 |
hematopoietic system | 5.65e-07 | 98 |
blood island | 5.65e-07 | 98 |
mesoderm | 6.03e-07 | 315 |
mesoderm-derived structure | 6.03e-07 | 315 |
presumptive mesoderm | 6.03e-07 | 315 |