FFCP PHASE1:Hg19::chr12:49212261..49212319,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=784 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1403 | |||
|TSSclassifier=strong | |||
|UniProt=F8VNV8,F8VUW8 | |||
|association_with_transcript=0bp_to_ENST00000547392,ENST00000547818_5end | |||
|description=CAGE_peak_1_at_CACNB3_5end | |||
|id=chr12:49212261..49212319,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.43e-19!248;CL:0000220!1.61e-19!246;CL:0000066!2.65e-15!254;CL:0000222!5.80e-12!119;CL:0002078!9.55e-10!44;CL:0000213!2.26e-09!57;CL:0000215!2.26e-09!57;CL:0000115!3.26e-09!35;CL:1000497!4.74e-09!18;CL:0002518!4.74e-09!18;CL:0000221!6.21e-09!71;CL:1000449!1.92e-08!16;CL:0002139!2.55e-08!24;CL:0000133!1.02e-07!59;CL:0000055!4.78e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.53e-09;17!CL:0002518;1.53e-09;17!CL:1000449;5.73e-09;15!CL:0002139;2.13e-08;24!CL:0000115;2.56e-08;36!CL:0002681;4.26e-07;12!CL:0002584;4.26e-07;12!CL:0002078;8.23e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.69e-20,250;CL:0000066,5.58e-15,253;CL:0000222,2.36e-12,121;CL:0002078,2.29e-10,45;CL:0000213,6.04e-10,58;CL:0000215,6.04e-10,58;CL:0000115,7.58e-10,36;CL:1000497,1.66e-09,17;CL:0002518,1.66e-09,17;CL:1000449,6.60e-09,15;CL:0000221,8.25e-09,72;CL:0002139,2.05e-08,24;CL:0000133,8.70e-08,59;CL:0002681,4.81e-07,12;CL:0002584,4.81e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.93e-28!312;UBERON:0000483!1.22e-27!309;UBERON:0004111!1.01e-24!241;UBERON:0000025!7.92e-24!194;UBERON:0000475!1.57e-22!365;UBERON:0000477!2.58e-22!286;UBERON:0000481!1.97e-18!347;UBERON:0000064!4.38e-17!219;UBERON:0005743!1.12e-15!86;UBERON:0004121!2.22e-15!169;UBERON:0000924!6.58e-15!173;UBERON:0006601!6.58e-15!173;UBERON:0001017!6.97e-15!82;UBERON:0001869!7.92e-15!32;UBERON:0003075!1.03e-14!86;UBERON:0007284!1.03e-14!86;UBERON:0000073!1.04e-14!94;UBERON:0001016!1.04e-14!94;UBERON:0000033!2.00e-14!123;UBERON:0003056!2.11e-14!61;UBERON:0000153!4.41e-14!129;UBERON:0007811!4.41e-14!129;UBERON:0002346!6.65e-14!90;UBERON:0000468!9.30e-14!659;UBERON:0000955!1.85e-13!69;UBERON:0006238!1.85e-13!69;UBERON:0001893!2.12e-13!34;UBERON:0000956!2.30e-13!25;UBERON:0000203!2.30e-13!25;UBERON:0002049!4.71e-13!79;UBERON:0007798!4.71e-13!79;UBERON:0002791!8.70e-13!33;UBERON:0002020!1.98e-12!34;UBERON:0003528!1.98e-12!34;UBERON:0002619!3.23e-12!22;UBERON:0001950!5.19e-12!20;UBERON:0000055!6.02e-12!69;UBERON:0002616!1.10e-11!59;UBERON:0003914!1.59e-11!118;UBERON:0001049!2.80e-11!57;UBERON:0005068!2.80e-11!57;UBERON:0006241!2.80e-11!57;UBERON:0007135!2.80e-11!57;UBERON:0002780!8.46e-11!41;UBERON:0001890!8.46e-11!41;UBERON:0006240!8.46e-11!41;UBERON:0003080!1.12e-10!42;UBERON:0004872!2.13e-10!84;UBERON:0000922!2.31e-10!612;UBERON:0000467!3.35e-10!625;UBERON:0000480!3.49e-10!626;UBERON:0001981!3.49e-10!60;UBERON:0007500!3.49e-10!60;UBERON:0004537!3.49e-10!60;UBERON:0006965!3.49e-10!60;UBERON:0002050!2.65e-09!605;UBERON:0005423!2.65e-09!605;UBERON:0000923!4.61e-09!604;UBERON:0005291!4.61e-09!604;UBERON:0006598!4.61e-09!604;UBERON:0002532!4.61e-09!604;UBERON:0004211!1.92e-08!16;UBERON:0001285!1.92e-08!16;UBERON:0007684!1.92e-08!16;UBERON:0003220!1.92e-08!16;UBERON:0004208!1.92e-08!16;UBERON:0001637!2.39e-08!42;UBERON:0003509!2.39e-08!42;UBERON:0004572!2.39e-08!42;UBERON:0006555!4.44e-08!17;UBERON:0005103!4.44e-08!17;UBERON:0000083!4.44e-08!17;UBERON:0009201!4.44e-08!17;UBERON:0004819!4.44e-08!17;UBERON:0006553!4.44e-08!17;UBERON:0003074!4.44e-08!17;UBERON:0003060!4.44e-08!17;UBERON:0001008!5.28e-08!45;UBERON:0003064!6.52e-08!37;UBERON:0006554!8.14e-08!44;UBERON:0004876!1.48e-07!20;UBERON:0004535!1.93e-07!110;UBERON:0000080!2.01e-07!18;UBERON:0002120!2.01e-07!18;UBERON:0004875!2.01e-07!18;UBERON:0005721!2.01e-07!18;UBERON:0005754!2.01e-07!18;UBERON:0007297!2.01e-07!18;UBERON:0001851!2.15e-07!16;UBERON:0002100!2.22e-07!216;UBERON:0001009!8.61e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.52e-14;32!UBERON:0000956;1.38e-13;25!UBERON:0000203;1.38e-13;25!UBERON:0002791;1.02e-12;32!UBERON:0001893;1.52e-12;34!UBERON:0002619;2.27e-12;22!UBERON:0001950;3.82e-12;20!UBERON:0003528;9.37e-12;34!UBERON:0002020;9.37e-12;34!UBERON:0006555;5.73e-09;15!UBERON:0004819;5.73e-09;15!UBERON:0001285;5.73e-09;15!UBERON:0007684;5.73e-09;15!UBERON:0006554;1.41e-08;30!UBERON:0001008;1.41e-08;30!UBERON:0003914;3.48e-08;74!UBERON:0002780;4.21e-08;41!UBERON:0001890;4.21e-08;41!UBERON:0001851;8.77e-08;15!UBERON:0000073;2.02e-07;53!UBERON:0002616;2.02e-07;53!UBERON:0000490;2.39e-07;33!UBERON:0000955;3.65e-07;68!UBERON:0000353;4.02e-07;15!UBERON:0001225;4.26e-07;12!UBERON:0008987;4.26e-07;12!UBERON:0007500;7.08e-07;56!UBERON:0001981;7.08e-07;56!UBERON:0004537;7.08e-07;56!UBERON:0001017;8.46e-07;75!UBERON:0000025;9.03e-07;93 | |||
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| |||
|short_description=p1@CACNB3 | |||
}} |
Revision as of 13:14, 11 January 2014
Short description: | p1@CACNB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CACNB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000547392, ENST00000547818_5end |
EntrezGene: | CACNB3 |
HGNC: | 1403 |
UniProt: | F8VNV8F8VUW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.69e-20 | 250 |
epithelial cell | 5.58e-15 | 253 |
mesodermal cell | 2.36e-12 | 121 |
meso-epithelial cell | 2.29e-10 | 45 |
lining cell | 6.04e-10 | 58 |
barrier cell | 6.04e-10 | 58 |
endothelial cell | 7.58e-10 | 36 |
kidney cell | 1.66e-09 | 17 |
kidney epithelial cell | 1.66e-09 | 17 |
epithelial cell of nephron | 6.60e-09 | 15 |
ectodermal cell | 8.25e-09 | 72 |
endothelial cell of vascular tree | 2.05e-08 | 24 |
neurectodermal cell | 8.70e-08 | 59 |
kidney cortical cell | 4.81e-07 | 12 |
renal cortical epithelial cell | 4.81e-07 | 12 |