FFCP PHASE1:Hg19::chr12:48390329..48390340,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C365 | |||
|description=CAGE_peak_at_chr12:48390329..48390340,+ | |||
|id=chr12:48390329..48390340,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.61e-29!4;CL:0002253!2.05e-15!2 | |||
|ontology_enrichment_celltype_v019=CL:0000138;9.07e-18;6!CL:0000153;2.45e-12;9!CL:0000447;2.45e-12;9!CL:0000327;5.93e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,9.07e-18,6;CL:0000138,9.07e-18,6;CL:0000153,2.45e-12,9;CL:0000447,2.45e-12,9;CL:0000327,5.93e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007029!1.33e-29!1;UBERON:0001242!5.61e-29!4;UBERON:0001262!5.61e-29!4;UBERON:0004786!5.61e-29!4;UBERON:0004808!5.61e-29!4;UBERON:0001277!5.61e-29!4;UBERON:0003350!2.02e-23!5;UBERON:0003127!1.15e-15!2;UBERON:0000485!1.69e-13!9;UBERON:0000344!2.24e-10!12;UBERON:0000060!2.24e-10!12;UBERON:0000014!1.96e-08!4;UBERON:0001052!2.26e-08!4;UBERON:0004907!6.04e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.74e-50;2!UBERON:0003126;1.65e-15;7!UBERON:0001005;1.65e-15;7!UBERON:0007196;5.55e-08;15!UBERON:0001558;5.55e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.74e-50,2;UBERON:0003126,1.65e-15,7;UBERON:0001005,1.65e-15,7;UBERON:0007196,5.55e-08,15;UBERON:0001558,5.55e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91980922181582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31852784401229,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:48390329..48390340,+ | |||
}} |
Revision as of 13:12, 11 January 2014
Short description: | p@chr12:48390329..48390340, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:48390329..48390340, + |
Coexpression cluster: | C365_trachea_throat_aorta_lung_parotid_salivary_umbilical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 9.07e-18 | 6 |
chondrocyte | 9.07e-18 | 6 |
GAG secreting cell | 2.45e-12 | 9 |
carbohydrate secreting cell | 2.45e-12 | 9 |
extracellular matrix secreting cell | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.74e-50 | 2 |
trachea | 1.65e-15 | 7 |
respiratory airway | 1.65e-15 | 7 |
tracheobronchial tree | 5.55e-08 | 15 |
lower respiratory tract | 5.55e-08 | 15 |