FFCP PHASE1:Hg19::chr12:46662913..46662948,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81539 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13447 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_ENST00000546893_5end | |||
|description=CAGE_peak_10_at_SLC38A1_5end | |||
|id=chr12:46662913..46662948,- | |||
|ontology_enrichment_celltype=CL:0000066!1.70e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.72e-08;82 | |||
|ontology_enrichment_disease=DOID:305!1.15e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.68e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.75e-21!57;UBERON:0005068!1.75e-21!57;UBERON:0006241!1.75e-21!57;UBERON:0007135!1.75e-21!57;UBERON:0005743!2.48e-21!86;UBERON:0001017!6.46e-21!82;UBERON:0000073!1.01e-20!94;UBERON:0001016!1.01e-20!94;UBERON:0000153!5.57e-19!129;UBERON:0007811!5.57e-19!129;UBERON:0000955!2.12e-18!69;UBERON:0006238!2.12e-18!69;UBERON:0000033!2.67e-18!123;UBERON:0002616!5.05e-18!59;UBERON:0000924!5.87e-18!173;UBERON:0006601!5.87e-18!173;UBERON:0004121!5.90e-18!169;UBERON:0002780!4.09e-17!41;UBERON:0001890!4.09e-17!41;UBERON:0006240!4.09e-17!41;UBERON:0003080!5.98e-16!42;UBERON:0003075!7.39e-16!86;UBERON:0007284!7.39e-16!86;UBERON:0002346!1.20e-15!90;UBERON:0002020!5.52e-14!34;UBERON:0003528!5.52e-14!34;UBERON:0001893!5.52e-14!34;UBERON:0001869!1.12e-13!32;UBERON:0007023!2.18e-13!115;UBERON:0002791!2.28e-13!33;UBERON:0002619!1.65e-12!22;UBERON:0000064!2.27e-12!219;UBERON:0003056!4.04e-12!61;UBERON:0001950!4.91e-12!20;UBERON:0000956!1.32e-11!25;UBERON:0000203!1.32e-11!25;UBERON:0000481!8.68e-09!347;UBERON:0000477!1.34e-08!286;UBERON:0000475!6.91e-07!365;UBERON:0003076!8.82e-07!15;UBERON:0003057!8.82e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.35e-13;22!UBERON:0002780;5.82e-13;41!UBERON:0001890;5.82e-13;41!UBERON:0001869;1.19e-12;32!UBERON:0001893;1.37e-12;34!UBERON:0003528;1.62e-12;34!UBERON:0002020;1.62e-12;34!UBERON:0001950;1.78e-12;20!UBERON:0000073;2.30e-12;53!UBERON:0002616;2.30e-12;53!UBERON:0002791;4.75e-12;32!UBERON:0000956;1.05e-11;25!UBERON:0000203;1.05e-11;25!UBERON:0000955;3.13e-09;68!UBERON:0001017;4.55e-09;75!UBERON:0001016;6.68e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.56e-23,56;UBERON:0005068,6.56e-23,56;UBERON:0006241,6.56e-23,56;UBERON:0007135,6.56e-23,56;UBERON:0001017,3.27e-22,81;UBERON:0001016,2.28e-21,89;UBERON:0000073,3.44e-21,53;UBERON:0002616,3.44e-21,53;UBERON:0000955,1.29e-19,68;UBERON:0006238,1.29e-19,68;UBERON:0011216,6.42e-19,223;UBERON:0004121,1.81e-18,171;UBERON:0000924,1.81e-18,171;UBERON:0006601,1.81e-18,171;UBERON:0002780,1.98e-17,41;UBERON:0001890,1.98e-17,41;UBERON:0003080,1.98e-17,41;UBERON:0006240,1.98e-17,41;UBERON:0003075,1.22e-16,82;UBERON:0007284,1.22e-16,82;UBERON:0002346,2.18e-16,86;UBERON:0010371,6.42e-16,104;UBERON:0003528,3.45e-14,34;UBERON:0002020,3.45e-14,34;UBERON:0001893,3.45e-14,34;UBERON:0001869,7.27e-14,32;UBERON:0007023,3.39e-13,114;UBERON:0002791,4.42e-13,32;UBERON:0002619,6.45e-13,22;UBERON:0003056,8.10e-13,61;UBERON:0001950,2.00e-12,20;UBERON:0000956,1.04e-11,25;UBERON:0000203,1.04e-11,25;UBERON:0010314,3.23e-10,132;UBERON:0001004,8.11e-07,74 | |||
|phase1_expression=2.54349730978779,0.428201047781966,1.55049844505568,0,0.446961094427288,1.74467704820074,0,0,0,0.491467873003018,2.79120467188971,1.31064823278103,1.05506791291381,1.8564952944007,4.97096063591874,0,0,0.730310090387373,0.487932798790507,0.861847406537515,1.63200552995402,1.56727360739044,0.85870796139317,2.73748850145768,2.38531015230125,2.13957536094264,2.29881650459848,2.36132343941038,0,3.0706351847777,0.619264493264304,2.75826367343678,0.6024118375565,1.84877005083394,5.42270404062111,1.70603078984906,0.880801318004542,1.10799081706375,1.60435557976113,0.868043482863407,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0.605399502633369,0.736555271975129,0,0,0,0,0,0,0,0,0,0,1.75996244461323,2.18455444504853,0.889509253863555,1.28019066769952,0.800791974072025,1.14950487990897,1.98313461835459,1.90810750907073,1.1384259382189,0,1.52909291250092,1.32171328579026,2.24203425192614,2.10707267820062,4.13090517239049,3.53709686474248,4.31763147898969,1.17030546773475,3.58514493296949,3.31413464014313,0,1.55974639639243,1.17842362989935,1.99380505125259,2.16643091012012,1.0247305578054,1.30059347559878,0.657751618414705,2.76350017785848,1.73881851441031,4.59688345802387,5.08327573370455,3.1360657141493,0.906474741580529,3.44898444241729,2.06176467289578,3.03623630423403,2.54852331459277,3.25541726928209,1.90090408889675,5.42070428679982,5.24745105733115,7.49584359314075,3.55165878066025,1.64225599384209,2.82249440514625,1.87208137048455,1.88271725047639,0,0,1.15076305659177,2.89151321907653,0.50133791063589,3.0417768981773,0.795285947051099,2.91980922181582,2.17430079477356,2.66075276955077,2.3715392137144,2.68507104770311,1.09288586487763,0.370784442784429,0,0,0,15.0249093312365,11.4398982156026,17.4585025624896,2.18638648103376,0.860234595106124,1.04142150482278,1.69592382577203,2.09749718104953,1.92582629358047,2.08994966536811,1.03366703667732,2.84613010149368,2.67776490211736,2.01414658554573,0.760272105718513,0.976248230192678,2.57364156242108,0.81014194788176,2.32179293538607,1.12264686313085,2.0270066486998,3.06633274931766,0.949265659568129,1.46561395144326,0,0,1.3082821564276,1.49091585508596,2.40597972162702,2.1185468930115,1.43418310374407,1.77334191099179,2.24271040056923,0,0.49333509683432,1.24484414159907,1.0776853765575,0.817309515567294,1.51357427644931,0,0.468642863667593,0.936480230490962,0.570471821544449,0.896692083310806,1.64408298101271,1.29498355494505,0.842704840213491,1.42907919878425,3.19369225010597,4.23635702820638,1.18800285728205,2.71993622206413,0,0.718618141816238,2.86171393721913,3.25308151667107,3.3247693858102,1.31693286264251,0.30648779579902,2.55404700141215,0.794025282120147,0.538168907066586,1.70845911054854,1.69545520927649,0.600182192168805,2.57631323096097,0.515281080091258,2.41951913231067,1.35021065793013,1.55899208257918,0.504867548488229,2.39329736469978,2.42469085228218,0.355009592516614,0.705264687593482,1.18692414617341,2.70565194428616,2.45471508531751,4.01526433544605,3.29329006549908,3.71083351300159,3.48581828608555,2.90250954043037,3.28017106138317,1.82488679537915,0,0,0,0.928735856063958,0.721879481669586,3.31259040111563,5.39471008249925,4.09718750801919,3.639701100169,3.26819166138609,4.03360052488864,3.23595139584395,3.92442930250692,2.69323009862473,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0.982827216677626,0,3.97316789473185,1.8448265781467,1.71567810298526,5.04851312879678,3.37205259772859,3.9206299240536,5.92566049014589,0.977424915930974,0,1.44331342025273,0.927443239800615,2.81780866165972,0.721832238805369,0.925971025153221,2.28304982681518,3.95102198979638,3.43394464837949,0,0,0,9.3733833986777,2.51973192298289,3.40260233381728,2.23896306757121,3.19697332365358,2.68367875415648,0,0,0.621984346622316,0,0,0,0,0,0,0,0,0,0.448524337381443,0,1.39342743059805,2.58543431515556,0,0,1.06375246633948,1.04007436911366,0.514414748524284,0,0.532844358032199,1.14382394926518,1.62786481617433,0.823240336780769,0.65147236858747,0.355391948742546,1.58390374586686,0.904318131178758,1.74306691720059,2.29937879718731,0,0,0,4.31324739884849,9.18895486672911,0,1.59259437334337,2.67119219315498,4.1184021545176,1.00876629594175,1.77327684181734,2.80315847317372,2.31017465303547,1.77866236955724,5.20559415430487,1.54657762555539,6.70065061337395,1.91381625495949,0,0,0,3.43536176813592,1.50051156317903,2.98391526069709,2.9115920614313,2.85486382075459,4.41566762095017,4.68565659970853,3.00946099727719,2.27407504055985,3.10419213877515,4.64957918974806,0.553107505625109,0.955719759148911,0.587403472388222,0,3.51505644408909,2.5885704098234,1.49418580924822,0.909382714338778,3.32870879020994,1.20956117331872,2.48107807818777,1.53461973288062,2.52594084989766,1.79394808957981,4.60536524160033,1.76939313257968,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0,0.846016147141356,3.20810352485256,2.11786274552562,0.803701137152247,0.546273504020151,1.04899531967539,0.902399225814824,3.46569016969866,1.56869953835371,0,4.43316841350078,3.4120015221269,0.850468526382578,1.51141141271498,0,1.62567862526312,2.00675909541941,2.80363900349542,2.49322802678617,0.671624264166535,0,0,1.79515087581472,1.64007322849853,6.18218949862176,0.618246069886334,1.55668090191184,2.31026599777646,1.72279661398852,1.30012049207304,1.6068392984416,3.963499449977,1.07834031980251,2.6095624703442,1.51620229732984,2.79292636657511,1.74020032697074,1.87498580315422,1.4245125703478,4.46269271474641,3.0750410778417,2.67986696238627,2.93357564481095,1.85938219718914,2.20368642781448,2.0911118104818,1.54016790088044,0.532306030317022,2.60979897622522,0.55597265731176,2.28999818787186,1.48863347743867,4.11293252134344,1.33441135746677,0.767693373934002,4.70732886837312,0,0,2.69808686374972,2.47083326762449,1.7671860351853,0.202182481573316,0,0.421258456238981,0.48763373908959,0.974853958525138,1.05650146756755,0.545999645631943,2.54529777516683,0,0,1.99031692572366,0.876901770507525,1.15755106853338,1.31178950409327,1.42037263873893,0.6196469961995,0.563391205064483,3.01163839628508,2.84922218938051,0,0.709522128141196,2.11107635297664,0.987884678879706,0.75894634753143,2.0996083214699,2.02066436723575,0.670302275535787,2.17781969722645,0.376575203107117,1.29151611801369,0,1.33029046061003,3.90529780351831,0.507447609232169,1.52927441428475,0.569647187174163,2.1440859791201,3.29089818468955,0.648473311192717,0.540031437238115,0,1.06824071127473,0.962479855263359,1.71528151186722,5.01668572839441,5.62649930608135,0,2.39139409093234,4.7899049143876,1.34053759092657,6.56188106444037,0.649243880549111,1.12318871245384,0.912938716132769,1.09675927041116,0,2.20079311142084,0.963528450622197,1.00899853595524,0.425846237690326,1.03051603426729,1.22896305723383,2.46043718681657,2.16903884225481,3.32159762183469,0.835218521685727,0,0,0.33307196799782,0,2.43282702530686,0.439524537815682,1.57768678274367,4.56917875537661,2.27308917445131,3.58116727106535,2.96964680832639,2.76444631889309,3.97659059106519,5.76744607283102,3.56187856073299,2.30725423917463,0,2.78947183551498,3.59169090190492,0,2.96579179256249,1.84627208191604,1.86623752597084,4.85289096195565,0.716084698702437,0,1.479651084554,0,0,3.87733098438087,6.77207116581514,7.98455192004777,3.64598865519327,4.1106199998212,0,4.09656413827799,3.0510438035132,9.21911958894952,1.03423011972439,0.874813840149763,7.11862479226498,4.42870692906919,2.77371808838438,12.2065389053667,11.5002430328474,11.8219047581419,8.7754158861589,3.05027697853172,2.23077990845765,2.23155749661011,1.25336261431701,1.1528195219403,0.897576444097721,0.54323685961004,1.27600463892768,0.549585560411174,1.5991043280559,1.02193298195737,0.941881538370149,0,0.451191321234361,0,0.335643173951685,0.569261198172555,0.476809736941136,4.00896322603251,4.40728582029699,1.55488378577335,2.380275037163,1.99052386215701,2.56526937059684,0.611030144933625,2.37216902944498,2.34771483998355,1.46190729307638,5.05508497355078,2.40773294189637,7.02793337176017,6.93328199019531,5.08728009223433,2.42780379534093,5.52418163989147,1.20990716048664,5.50930970934882,2.52746318513952,1.35291077473043,0.72581733978073,2.65861549082874,1.65495977937749,3.13932918407225,1.19472429772959,3.9845336444171,8.32048038078832,6.59527005673497,1.56787835863004,2.69883540399248,0.698906672968121,0,3.57998425769615,3.50828722013691,4.02365739560725,2.81268147816416,0.529536760149002,2.48578814858586,0.822251547880505,1.19228767021794,8.9268222297789,2.93327074102205,0.881747022766871,2.77488893161158,1.9980960958213,5.18725501754782,3.09248809647972,2.05913997434357,3.88947954568004,1.36677789121976,2.12124631155116,1.35904206073614,2.61507115780833,2.14196257036276,1.73370353940911,3.00210144354895,2.32739144116388,1.27746588066972,3.0083580899397,1.57732412567589,1.39641200636127,2.97908551215189,1.43574604915363,4.3929380109778,5.57993862577542,3.57074331906996,5.1059439089912,1.80149941771202,0,0.945398187686684,0.576911008668165,1.01105315781277,1.77169466726548,2.11683330164461,2.38568906942791,7.89979755447138,2.25054407851027,2.33817042215297,2.07720169014593,1.799791132412,0.77380195455795,7.83669280888518,5.03152031398899,1.41850273138557,1.83591058472493,4.54081447033448,3.40645944732405,2.30298236783334,2.1440859791201,7.28301167401975,3.5597595271665,1.62899880526114,0,1.95952416065645,3.59190574687462,1.8881279772348,0,1.13312091520126,0.439656701034247,0,9.17908990167009,5.15707146796491,3.76391043345525,2.11444506695002,0.961086713109252,1.10043013569766,1.65695622138878,2.48083010905975,1.7785046870815,3.0448149595224,2.55336503108073,0,0,0,0,5.33983927250797,7.08854543973589,5.24712939078442,5.88397374320549,5.73409195690071,5.54645257684261,11.0531597235663,0.553394539744923,4.12435346274952,1.66814029295813,0.285465333544967,0.235265819698172,3.27834434064817,6.81128834470878,0.149254802886874,0,0,0.568209015825267,0.50313580350515,0,1.37304041038154,1.66354016139563,0.466311601748341,0.443565449968902,1.59296767163702,1.34940933649081,1.24210365501008,0.414706207840855,1.86089200190596,0.521745061811734,1.6528336989694,2.28483127301277,1.22061219961398,0.545545977607678,2.14821114084977,0.928067519756987,0.796191777397232,3.20022211730523,1.37358282073117,2.02049693259551,2.52369796457302,1.15571898244382,2.35885750512418,1.30497145982606,2.26705925512272,1.62065732026684,1.46842022703881,1.96997725189636,1.85280868296583,3.94711289241673,1.06013487567529,3.08662461233464,2.87202149110224,4.86858885317099,2.76344273384959,2.43087964941906,5.80685431837269,1.16916185303633,2.25870228532717,2.45348091383766,0.327609848846413,0.983091635014877,2.11312123358627,0.999936979274649,0.640150378164845,5.68309432880692,1.70254786070051,0,2.65771064666944,4.97661808026378,3.7089367678059,4.31299245586727,0.314531883711793,3.1670795075684,0.33946505990805,1.70059936081346,2.97445834221605,1.11728983594649,0.636008701306837,2.52357584004011,4.80342448971282,3.52675943690684,3.062454773532,8.02865313705744,7.08482881627925,3.99084647642878,11.0762836690008,12.3515131148642,11.5492611615244,6.45902582527404,2.85538840518309,0.981477185010256,2.00548529691159,1.83428598521679,4.27444964756251,3.05105676373734,3.4517996303005,0.795664888465099,3.00841313397029,0.80682027481408,1.56302802246618,0.261906694481422,2.78412259767164,3.252833896775,10.265712861996,7.81078098613847,6.40729069153671,8.11722370482007,7.11067251723685,1.09651553371436,1.98484471355718,3.69329613155203,2.6830109804315,11.7854403893223,6.05310699993883,4.24875922965642,6.14687916648504,0.443511850813194,0.806637912890455,0.342976018874837,14.3416136581115,11.1813715056843,2.83665218121524,5.89526430027966,1.96232732126285,3.61365856806804,0.560544326627578,1.82631744101899,6.0459725541214,2.38875843943525,3.28792103212619,1.26410889386181,3.02227705957126,3.12944890144643,0.801711364730253,1.45051314914126,4.4386804044427,2.07377898544228,5.59295566466361,1.41998400876678,2.8120423570522,6.35080575286394,2.97838929107265,0.31020638566432,0.955538938977433,2.34896406775364,5.98716425052982,4.51096322434397,1.29485767437579,0.615976841137482,1.1598144313382,2.91426595835484,4.44484980578001,5.57062170451831,5.58924426654572,6.32498059418176,3.84791808609002,7.24621649120033,2.2380505851304,0.655678681511872,2.82190377816914,1.22574160876953,6.3632667717439,9.03018948728748,5.64388160621463,5.4945244585842,2.20905249094162,0.939839179798536,1.22469987149797,2.49852889812322,0.71421575442263,0.705789743431384,1.04313776695919,0,2.75237570042724,2.15009374727177,3.94428905482962,8.36295329348251,6.54526035510566,4.7612415646386,0,0.462175628631418,0.432626562123789,1.26166424835079,0.218531143927391,0,2.03977659483963,3.74104367371785,3.03253168464988,0.250707539292375,0.454672189309436,0,4.1458471972939,2.68925789240928,1.91910583710883,1.66645102024618,5.87759079507656,5.40050014373964,2.35476911419288,1.52753179867596,2.82964064541507,1.08858373948481,3.08009970976753,2.08791364345221,2.438554983351,1.99596213927608,1.30245229777559,3.4152750680869,0,2.60493086109102,2.34640942403454,2.68931177202306,0.813792356631477,0,2.21401172950129,0.961705476909699 | |||
|short_description=p10@SLC38A1 | |||
}} |
Revision as of 13:07, 11 January 2014
Short description: | p10@SLC38A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SLC38A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000546893_5end |
EntrezGene: | SLC38A1 |
HGNC: | 13447 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.68e-08 | 106 |