FFCP PHASE1:Hg19::chr12:46662729..46662757,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81539 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13447 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=20bp_to_ENST00000549049_5end | |||
|description=CAGE_peak_7_at_SLC38A1_5end | |||
|id=chr12:46662729..46662757,- | |||
|ontology_enrichment_celltype=CL:0000542!2.61e-17!53;CL:0000051!2.61e-17!53;CL:0000838!8.58e-17!52;CL:0000945!1.67e-09!24;CL:0000826!1.67e-09!24;CL:0000791!1.86e-09!18;CL:0000789!1.86e-09!18;CL:0002420!1.86e-09!18;CL:0002419!1.86e-09!18;CL:0000790!1.86e-09!18;CL:0000236!3.87e-07!14;CL:0000084!5.84e-07!25;CL:0000827!5.84e-07!25;CL:0000066!8.78e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000542;3.10e-10;53!CL:0000791;1.28e-09;18!CL:0000789;1.28e-09;18!CL:0002419;1.28e-09;18!CL:0000945;1.40e-09;24!CL:0000084;2.65e-07;25!CL:0000236;6.20e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.77e-18,53;CL:0000051,6.77e-18,53;CL:0000838,2.28e-17,52;CL:0000945,1.18e-09,24;CL:0000826,1.18e-09,24;CL:0000791,1.32e-09,18;CL:0000789,1.32e-09,18;CL:0002420,1.32e-09,18;CL:0002419,1.32e-09,18;CL:0000790,1.32e-09,18;CL:0000084,2.61e-07,25;CL:0000827,2.61e-07,25;CL:0000738,2.97e-07,136;CL:0000236,3.04e-07,14;CL:0000066,8.15e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000051;3.10e-10;53!CL:0000790;1.28e-09;18 | |||
|ontology_enrichment_disease=DOID:305!5.56e-11!106;DOID:0050687!4.92e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.05e-10,106;DOID:0050687,7.72e-09,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p7@SLC38A1 | |||
}} |
Revision as of 13:07, 11 January 2014
Short description: | p7@SLC38A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC38A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000549049_5end |
EntrezGene: | SLC38A1 |
HGNC: | 13447 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.77e-18 | 53 |
common lymphoid progenitor | 6.77e-18 | 53 |
lymphoid lineage restricted progenitor cell | 2.28e-17 | 52 |
lymphocyte of B lineage | 1.18e-09 | 24 |
pro-B cell | 1.18e-09 | 24 |
mature alpha-beta T cell | 1.32e-09 | 18 |
alpha-beta T cell | 1.32e-09 | 18 |
immature T cell | 1.32e-09 | 18 |
mature T cell | 1.32e-09 | 18 |
immature alpha-beta T cell | 1.32e-09 | 18 |
T cell | 2.61e-07 | 25 |
pro-T cell | 2.61e-07 | 25 |
leukocyte | 2.97e-07 | 136 |
B cell | 3.04e-07 | 14 |
epithelial cell | 8.15e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.05e-10 | 106 |
cell type cancer | 7.72e-09 | 143 |