FFCP PHASE1:Hg19::chr12:39300630..39300641,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C817 | |||
|description=CAGE_peak_at_chr12:39300630..39300641,- | |||
|id=chr12:39300630..39300641,- | |||
|ontology_enrichment_celltype=CL:0002057!1.51e-18!42;CL:0000860!1.70e-18!45;CL:0000557!1.99e-16!71;CL:0000766!5.38e-16!76;CL:0002009!1.17e-15!65;CL:0000839!2.62e-15!70;CL:0002194!7.18e-15!63;CL:0000576!7.18e-15!63;CL:0000040!7.18e-15!63;CL:0000559!7.18e-15!63;CL:0000763!8.61e-13!112;CL:0000049!8.61e-13!112;CL:0000738!1.62e-12!140;CL:0000988!6.76e-11!182;CL:0002031!7.94e-11!124;CL:0002032!7.78e-10!165;CL:0000837!7.78e-10!165;CL:0002087!8.52e-10!119;CL:0000037!1.04e-09!172;CL:0000566!1.04e-09!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.62e-29;33!CL:0002057;6.62e-29;33!CL:0000473;1.12e-20;39!CL:0000234;1.12e-20;39!CL:0000576;2.00e-18;48!CL:0000766;4.99e-16;69!CL:0002393;8.60e-12;6!CL:0002397;8.60e-12;6!CL:0002087;4.05e-10;104!CL:0000313;2.13e-09;1!CL:0000763;2.53e-08;100!CL:0000738;1.46e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.52e-39,42;CL:0002057,8.52e-39,42;CL:0000473,1.31e-33,48;CL:0000234,1.31e-33,48;CL:0000557,1.12e-29,67;CL:0002009,5.02e-29,61;CL:0000839,1.35e-26,66;CL:0002194,2.40e-26,59;CL:0000576,2.40e-26,59;CL:0000040,2.40e-26,59;CL:0000559,2.40e-26,59;CL:0000766,3.60e-24,72;CL:0002031,1.67e-19,120;CL:0000763,2.40e-17,108;CL:0000049,2.40e-17,108;CL:0000988,3.34e-17,177;CL:0000738,8.00e-17,136;CL:0002087,4.18e-16,115;CL:0002032,1.08e-13,161;CL:0000837,1.08e-13,161;CL:0000037,5.57e-13,168;CL:0000313,2.04e-09,1;CL:0002393,4.55e-08,9;CL:0002397,4.55e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.78e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;2.13e-09;1!DOID:0060060;8.16e-09;1!DOID:0060061;8.16e-09;1!DOID:8691;8.16e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.04e-09,1;DOID:0060060,9.91e-09,1;DOID:0060061,9.91e-09,1;DOID:8691,9.91e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.85e-16!102;UBERON:0003061!2.85e-16!102;UBERON:0002193!6.88e-15!112;UBERON:0001474!2.95e-14!86;UBERON:0002371!1.07e-13!80;UBERON:0002405!5.40e-13!115;UBERON:0004765!6.15e-11!101;UBERON:0001434!6.15e-11!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;2.13e-09;1!UBERON:0002331;1.29e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.97e-28,98;UBERON:0003061,9.97e-28,98;UBERON:0002371,7.56e-26,76;UBERON:0002193,7.35e-25,108;UBERON:0001474,9.35e-24,82;UBERON:0004765,2.15e-21,90;UBERON:0002405,1.30e-20,93;UBERON:0001434,5.74e-19,100;UBERON:0003081,1.33e-11,203;UBERON:0002204,3.79e-10,167;UBERON:0004911,2.04e-09,1;UBERON:0002331,1.22e-07,10;UBERON:0000358,1.22e-07,10;UBERON:0000307,1.22e-07,10;UBERON:0000091,1.22e-07,10;UBERON:0000087,1.22e-07,10;UBERON:0007010,1.22e-07,10;UBERON:0007806,1.22e-07,10;UBERON:0008780,1.22e-07,10;UBERON:0005728,1.22e-07,10;UBERON:0000926,4.37e-07,315;UBERON:0004120,4.37e-07,315;UBERON:0006603,4.37e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,1.23150884174919,0.787107813136792,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,1.40381113229099,1.73608696572681,0,0,0,0,0,0,0,0,0.929119112685311,0,0.512321413058201,0.709446689665756,2.75796544589295,3.87290810150296,6.77132432971709,0,0,0.224723484445085,3.67300670845083,1.28371610830437,10.2293940127847,0,0,0,2.03146467040009,2.26954089876456,6.22822248995575,0.251248665256743,0,0,4.84319602106695,7.36555271975129,11.3926459478718,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,1.00883967391873,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.912938716132769,0,0,0.169291777801603,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.0769502585037971,0,0.46112780877612,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0.0884575645033392,0,10.0817183751411,2.84197059576957,2.61054873763638,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0,0,0.137539436597234,0,1.349843349309,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,1.53172788381731,0.327872630709804,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0.245772908753719,0,1.19992437512958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0.235939446695481,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0.781078098613847,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,7.49431393045209,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0.0999411559249289,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr12:39300630..39300641,- | |||
}} |
Revision as of 12:57, 11 January 2014
Short description: | p@chr12:39300630..39300641, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:39300630..39300641, - |
Coexpression cluster: | C817_cord_CD14_mycosis_xeroderma_migratory_B_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.52e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.52e-39 | 42 |
defensive cell | 1.31e-33 | 48 |
phagocyte | 1.31e-33 | 48 |
granulocyte monocyte progenitor cell | 1.12e-29 | 67 |
macrophage dendritic cell progenitor | 5.02e-29 | 61 |
myeloid lineage restricted progenitor cell | 1.35e-26 | 66 |
monopoietic cell | 2.40e-26 | 59 |
monocyte | 2.40e-26 | 59 |
monoblast | 2.40e-26 | 59 |
promonocyte | 2.40e-26 | 59 |
myeloid leukocyte | 3.60e-24 | 72 |
hematopoietic lineage restricted progenitor cell | 1.67e-19 | 120 |
myeloid cell | 2.40e-17 | 108 |
common myeloid progenitor | 2.40e-17 | 108 |
hematopoietic cell | 3.34e-17 | 177 |
leukocyte | 8.00e-17 | 136 |
nongranular leukocyte | 4.18e-16 | 115 |
hematopoietic oligopotent progenitor cell | 1.08e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-13 | 161 |
hematopoietic stem cell | 5.57e-13 | 168 |
serous secreting cell | 2.04e-09 | 1 |
intermediate monocyte | 4.55e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.55e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.97e-28 | 98 |
blood island | 9.97e-28 | 98 |
bone marrow | 7.56e-26 | 76 |
hemolymphoid system | 7.35e-25 | 108 |
bone element | 9.35e-24 | 82 |
skeletal element | 2.15e-21 | 90 |
immune system | 1.30e-20 | 93 |
skeletal system | 5.74e-19 | 100 |
lateral plate mesoderm | 1.33e-11 | 203 |
musculoskeletal system | 3.79e-10 | 167 |
epithelium of female gonad | 2.04e-09 | 1 |
umbilical cord | 1.22e-07 | 10 |
blastocyst | 1.22e-07 | 10 |
blastula | 1.22e-07 | 10 |
bilaminar disc | 1.22e-07 | 10 |
inner cell mass | 1.22e-07 | 10 |
cleaving embryo | 1.22e-07 | 10 |
connecting stalk | 1.22e-07 | 10 |
inner cell mass derived epiblast | 1.22e-07 | 10 |
extraembryonic mesoderm | 1.22e-07 | 10 |
mesoderm | 4.37e-07 | 315 |
mesoderm-derived structure | 4.37e-07 | 315 |
presumptive mesoderm | 4.37e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.04e-09 | 1 |
non-Hodgkin lymphoma | 9.91e-09 | 1 |
cutaneous T cell lymphoma | 9.91e-09 | 1 |
mycosis fungoides | 9.91e-09 | 1 |