FFCP PHASE1:Hg19::chr12:32974766..32974775,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5318 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9024 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_ENST00000549461_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_16_at_PKP2_5end | |||
|id=chr12:32974766..32974775,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.21e-40;1!UBERON:0010227;2.70e-40;1!UBERON:0010226;2.70e-40;1!UBERON:0005062;2.53e-11;4!UBERON:0007284;2.53e-11;4!UBERON:0004872;5.54e-07;7 | |||
|ontology_enrichment_disease=DOID:114!3.53e-22!2;DOID:178!5.05e-12!1;DOID:326!5.05e-12!1;DOID:3978!5.05e-12!1;DOID:3394!5.05e-12!1;DOID:5844!5.05e-12!1;DOID:1287!1.40e-11!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!9.20e-33!3;UBERON:0009751!9.20e-33!3;UBERON:0004151!9.20e-33!3;UBERON:0000946!9.20e-33!3;UBERON:0002523!9.20e-33!3;UBERON:0005983!9.20e-33!3;UBERON:0002165!9.20e-33!3;UBERON:0002062!9.20e-33!3;UBERON:0007280!9.20e-33!3;UBERON:0007100!5.83e-31!27;UBERON:0002081!2.06e-22!2;UBERON:0002133!2.85e-22!2;UBERON:0002342!8.33e-19!14;UBERON:0005062!8.33e-19!14;UBERON:0007023!2.22e-18!115;UBERON:0000948!9.26e-16!24;UBERON:0005498!9.26e-16!24;UBERON:0004140!9.26e-16!24;UBERON:0009881!9.26e-16!24;UBERON:0004141!9.26e-16!24;UBERON:0003084!9.26e-16!24;UBERON:0007005!9.26e-16!24;UBERON:0004139!9.26e-16!24;UBERON:0004291!9.26e-16!24;UBERON:0002146!2.63e-12!1;UBERON:0005623!2.63e-12!1;UBERON:0002084!3.65e-12!1;UBERON:0002082!3.65e-12!1;UBERON:0004706!3.65e-12!1;UBERON:0002079!4.06e-12!1;UBERON:0002134!4.53e-12!1;UBERON:0005208!4.53e-12!1;UBERON:0005946!4.53e-12!1;UBERON:0005965!4.53e-12!1;UBERON:0002078!4.53e-12!1;UBERON:0002135!5.62e-12!1;UBERON:0002363!1.63e-11!1;UBERON:0007647!1.63e-11!1;UBERON:0010115!1.63e-11!1;UBERON:0002022!1.81e-11!1;UBERON:0003103!1.99e-11!69;UBERON:0001009!4.51e-08!113;UBERON:0003075!9.32e-07!86;UBERON:0007284!9.32e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;6.39e-53;3!UBERON:0002146;6.62e-41;1!UBERON:0005623;6.62e-41;1!UBERON:0002084;2.70e-40;1!UBERON:0002079;2.70e-40;1!UBERON:0002082;2.70e-40;1!UBERON:0007100;6.36e-40;25!UBERON:0000948;2.63e-29;22!UBERON:0002081;6.30e-21;2!UBERON:0003978;1.22e-14;3!UBERON:0000946;1.22e-14;3!UBERON:0003103;5.07e-10;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,6.39e-53,3;UBERON:0002146,6.62e-41,1;UBERON:0005623,6.62e-41,1;UBERON:0002084,2.21e-40,1;UBERON:0002082,2.21e-40,1;UBERON:0010226,2.21e-40,1;UBERON:0002079,3.30e-40,1;UBERON:0007100,4.92e-37,27;UBERON:0000948,6.34e-27,24;UBERON:0005498,6.34e-27,24;UBERON:0004140,6.34e-27,24;UBERON:0009881,6.34e-27,24;UBERON:0004141,6.34e-27,24;UBERON:0003084,6.34e-27,24;UBERON:0007005,6.34e-27,24;UBERON:0004139,6.34e-27,24;UBERON:0004291,6.34e-27,24;UBERON:0002081,6.96e-21,2;UBERON:0010227,6.96e-21,2;UBERON:0003103,3.48e-15,68;UBERON:0003978,1.22e-14,3;UBERON:0009751,1.22e-14,3;UBERON:0000946,1.22e-14,3;UBERON:0002523,1.22e-14,3;UBERON:0005983,1.22e-14,3;UBERON:0002165,1.22e-14,3;UBERON:0002062,1.22e-14,3;UBERON:0007280,1.22e-14,3;UBERON:0001009,1.80e-09,112;UBERON:0004872,2.69e-08,83;UBERON:0004797,5.08e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,4.58320848023367,0.717873024576814,0.599037001496973,0.429226048136571,2.90122894674434,2.08268764708851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,1.42939065274673,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p16@PKP2 | |||
}} |
Revision as of 12:56, 11 January 2014
Short description: | p16@PKP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PKP2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -18bp_to_ENST00000549461_5end |
EntrezGene: | PKP2 |
HGNC: | 9024 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 6.39e-53 | 3 |
pulmonary valve | 6.62e-41 | 1 |
semi-lunar valve | 6.62e-41 | 1 |
heart left ventricle | 2.21e-40 | 1 |
cardiac ventricle | 2.21e-40 | 1 |
future cardiac ventricle | 2.21e-40 | 1 |
left cardiac atrium | 3.30e-40 | 1 |
primary circulatory organ | 4.92e-37 | 27 |
heart | 6.34e-27 | 24 |
primitive heart tube | 6.34e-27 | 24 |
primary heart field | 6.34e-27 | 24 |
anterior lateral plate mesoderm | 6.34e-27 | 24 |
heart tube | 6.34e-27 | 24 |
heart primordium | 6.34e-27 | 24 |
cardiac mesoderm | 6.34e-27 | 24 |
cardiogenic plate | 6.34e-27 | 24 |
heart rudiment | 6.34e-27 | 24 |
cardiac atrium | 6.96e-21 | 2 |
future cardiac atrium | 6.96e-21 | 2 |
compound organ | 3.48e-15 | 68 |
valve | 1.22e-14 | 3 |
cardiac mesenchyme | 1.22e-14 | 3 |
cardial valve | 1.22e-14 | 3 |
tunica intima | 1.22e-14 | 3 |
heart layer | 1.22e-14 | 3 |
endocardium | 1.22e-14 | 3 |
endocardial cushion | 1.22e-14 | 3 |
presumptive endocardium | 1.22e-14 | 3 |
circulatory system | 1.80e-09 | 112 |
splanchnic layer of lateral plate mesoderm | 2.69e-08 | 83 |
blood vessel layer | 5.08e-07 | 7 |