FFCP PHASE1:Hg19::chr12:27677085..27677155,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8496 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9249 | |||
|TSSclassifier=weak | |||
|UniProt=Q86W92,F5GZP6,F5H0E0 | |||
|association_with_transcript=0bp_to_ENST00000318304,ENST00000535047,ENST00000537927,ENST00000540114,ENST00000541633,ENST00000545334_5end | |||
|description=CAGE_peak_1_at_PPFIBP1_5end | |||
|id=chr12:27677085..27677155,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.34e-11!180;CL:0002139!1.80e-09!24;CL:0000222!3.79e-08!119;CL:0000057!1.87e-07!75;CL:0002620!8.49e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.87e-09;24!CL:0002620;8.75e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.79e-09,24;CL:0000222,2.88e-08,121;CL:0000057,2.03e-07,76;CL:0002620,8.46e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!1.04e-07!27;DOID:193!2.21e-07!29;DOID:2394!3.93e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:120;9.66e-08;27!DOID:193;2.03e-07;29!DOID:2394;3.72e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:120,1.03e-07,27;DOID:193,2.21e-07,29;DOID:2394,3.92e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000477!1.86e-16!286;UBERON:0004111!4.28e-15!241;UBERON:0000119!9.09e-15!312;UBERON:0000467!2.11e-14!625;UBERON:0000468!2.23e-14!659;UBERON:0000480!3.65e-14!626;UBERON:0000483!9.60e-14!309;UBERON:0002049!1.74e-13!79;UBERON:0007798!1.74e-13!79;UBERON:0000055!2.15e-13!69;UBERON:0004872!2.45e-12!84;UBERON:0000475!2.74e-12!365;UBERON:0000025!5.67e-12!194;UBERON:0000481!1.39e-11!347;UBERON:0001981!2.11e-11!60;UBERON:0007500!2.11e-11!60;UBERON:0004537!2.11e-11!60;UBERON:0006965!2.11e-11!60;UBERON:0003914!2.35e-09!118;UBERON:0001009!8.01e-09!113;UBERON:0004535!6.99e-08!110;UBERON:0002050!1.21e-07!605;UBERON:0005423!1.21e-07!605;UBERON:0000923!1.41e-07!604;UBERON:0005291!1.41e-07!604;UBERON:0006598!1.41e-07!604;UBERON:0002532!1.41e-07!604;UBERON:0000914!1.98e-07!83;UBERON:0002329!1.98e-07!83;UBERON:0003077!1.98e-07!83;UBERON:0003059!1.98e-07!83;UBERON:0007282!1.98e-07!83;UBERON:0009618!1.98e-07!83;UBERON:0007285!1.98e-07!83;UBERON:0000922!4.43e-07!612;UBERON:0001637!4.68e-07!42;UBERON:0003509!4.68e-07!42;UBERON:0004572!4.68e-07!42;UBERON:0000486!6.96e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;7.16e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,8.82e-15,240;UBERON:0000119,1.45e-14,309;UBERON:0002049,1.40e-13,78;UBERON:0007798,1.40e-13,78;UBERON:0000483,1.51e-13,306;UBERON:0000055,1.66e-13,68;UBERON:0004872,2.06e-12,83;UBERON:0000025,6.48e-12,192;UBERON:0007500,1.64e-11,59;UBERON:0001981,1.64e-11,59;UBERON:0004537,1.64e-11,59;UBERON:0006965,1.64e-11,59;UBERON:0003914,2.18e-09,117;UBERON:0001009,8.81e-09,112;UBERON:0004535,7.69e-08,109;UBERON:0001637,4.66e-07,42;UBERON:0003509,4.66e-07,42;UBERON:0004572,4.66e-07,42;UBERON:0000486,7.50e-07,83 | |||
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| |||
|short_description=p1@PPFIBP1 | |||
}} |
Revision as of 12:47, 11 January 2014
Short description: | p1@PPFIBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPFIBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000318304, ENST00000535047, ENST00000537927, ENST00000540114, ENST00000541633, ENST00000545334_5end |
EntrezGene: | PPFIBP1 |
HGNC: | 9249 |
UniProt: | Q86W92F5GZP6F5H0E0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.79e-09 | 24 |
mesodermal cell | 2.88e-08 | 121 |
fibroblast | 2.03e-07 | 76 |
skin fibroblast | 8.46e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 8.82e-15 | 240 |
cell layer | 1.45e-14 | 309 |
vasculature | 1.40e-13 | 78 |
vascular system | 1.40e-13 | 78 |
epithelium | 1.51e-13 | 306 |
vessel | 1.66e-13 | 68 |
splanchnic layer of lateral plate mesoderm | 2.06e-12 | 83 |
tube | 6.48e-12 | 192 |
epithelial tube open at both ends | 1.64e-11 | 59 |
blood vessel | 1.64e-11 | 59 |
blood vasculature | 1.64e-11 | 59 |
vascular cord | 1.64e-11 | 59 |
epithelial tube | 2.18e-09 | 117 |
circulatory system | 8.81e-09 | 112 |
cardiovascular system | 7.69e-08 | 109 |
artery | 4.66e-07 | 42 |
arterial blood vessel | 4.66e-07 | 42 |
arterial system | 4.66e-07 | 42 |
multilaminar epithelium | 7.50e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 1.03e-07 | 27 |
reproductive organ cancer | 2.21e-07 | 29 |
ovarian cancer | 3.92e-07 | 14 |