FFCP PHASE1:Hg19::chr12:15103541..15103620,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=397 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=679 | |||
|TSSclassifier=strong | |||
|UniProt=P52566 | |||
|association_with_transcript=25bp_to_AB451315,AB451445,AB464153,AF498927,DQ893303,DQ896476_5end | |||
|description=CAGE_peak_6_at_ARHGDIB_5end | |||
|id=chr12:15103541..15103620,- | |||
|ontology_enrichment_celltype=CL:0000037!4.31e-57!172;CL:0000566!4.31e-57!172;CL:0000988!2.28e-56!182;CL:0002032!1.96e-53!165;CL:0000837!1.96e-53!165;CL:0000738!2.38e-49!140;CL:0002031!3.12e-41!124;CL:0002087!1.30e-39!119;CL:0000763!1.77e-30!112;CL:0000049!1.77e-30!112;CL:0000766!4.21e-23!76;CL:0000542!1.89e-20!53;CL:0000051!1.89e-20!53;CL:0000838!3.13e-20!52;CL:0000557!1.18e-19!71;CL:0000839!2.14e-19!70;CL:0002009!4.28e-18!65;CL:0002194!3.14e-17!63;CL:0000576!3.14e-17!63;CL:0000040!3.14e-17!63;CL:0000559!3.14e-17!63;CL:0002057!5.06e-15!42;CL:0000860!3.80e-13!45;CL:0000945!1.80e-12!24;CL:0000826!1.80e-12!24;CL:0000134!5.97e-10!358;CL:0002320!1.12e-08!365;CL:0000084!5.26e-08!25;CL:0000827!5.26e-08!25;CL:0000236!1.78e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.52e-16;24!CL:0000542;1.47e-15;53!CL:0000738;2.14e-13;136!CL:0002087;3.67e-13;104!CL:0000988;2.14e-12;177!CL:0000766;1.09e-11;69!CL:0000763;3.94e-11;100!CL:0000473;1.58e-10;39!CL:0000234;1.58e-10;39!CL:0000576;1.77e-10;48!CL:0000084;1.84e-10;25!CL:0000791;1.90e-09;18!CL:0000789;1.90e-09;18!CL:0002419;1.90e-09;18!CL:0000860;4.46e-09;33!CL:0002057;4.46e-09;33!CL:0000236;6.66e-08;13!CL:0000219;5.45e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.60e-69,168;CL:0000988,1.15e-68,177;CL:0002032,1.81e-64,161;CL:0000837,1.81e-64,161;CL:0000738,1.21e-59,136;CL:0002031,5.71e-50,120;CL:0002087,5.05e-49,115;CL:0000763,5.84e-34,108;CL:0000049,5.84e-34,108;CL:0000542,1.32e-27,53;CL:0000051,1.32e-27,53;CL:0000838,2.77e-27,52;CL:0000766,6.37e-27,72;CL:0000557,1.58e-22,67;CL:0000839,9.69e-21,66;CL:0002009,5.11e-20,61;CL:0002194,7.81e-19,59;CL:0000576,7.81e-19,59;CL:0000040,7.81e-19,59;CL:0000559,7.81e-19,59;CL:0000473,3.57e-18,48;CL:0000234,3.57e-18,48;CL:0000134,3.51e-17,354;CL:0000945,2.91e-16,24;CL:0000826,2.91e-16,24;CL:0002320,4.87e-16,361;CL:0000860,8.82e-15,42;CL:0002057,8.82e-15,42;CL:0000219,1.76e-12,386;CL:0000084,1.30e-10,25;CL:0000827,1.30e-10,25;CL:0000791,1.08e-09,18;CL:0000789,1.08e-09,18;CL:0002420,1.08e-09,18;CL:0002419,1.08e-09,18;CL:0000790,1.08e-09,18;CL:0000048,2.73e-09,427;CL:0000034,3.05e-09,441;CL:0000236,4.11e-09,14;CL:0000723,6.12e-09,433 | |||
|ontology_enrichment_development_v019=CL:0000051;1.47e-15;53!CL:0002057;1.80e-10;42!CL:0000049;1.42e-09;108!CL:0000790;1.90e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!7.26e-12!51;DOID:0060083!7.26e-12!51;DOID:1240!2.04e-09!39;DOID:8692!2.63e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.14e-08;51!DOID:0060083;1.14e-08;51!DOID:8692;2.60e-08;31!DOID:1240;1.30e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.01e-13,51;DOID:0060083,1.01e-13,51;DOID:1240,3.52e-10,39;DOID:8692,7.23e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.10e-28!102;UBERON:0003061!4.10e-28!102;UBERON:0002193!4.82e-27!112;UBERON:0003081!2.57e-16!216;UBERON:0002371!4.46e-16!80;UBERON:0002405!6.19e-15!115;UBERON:0001474!5.39e-13!86;UBERON:0000178!1.23e-11!15;UBERON:0000179!1.23e-11!15;UBERON:0000463!1.23e-11!15;UBERON:0004765!9.89e-09!101;UBERON:0001434!9.89e-09!101;UBERON:0002384!6.65e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.41e-16;15!UBERON:0000179;3.41e-16;15!UBERON:0000463;3.41e-16;15!UBERON:0002390;8.03e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.07e-36,98;UBERON:0003061,6.07e-36,98;UBERON:0002193,5.57e-32,108;UBERON:0002405,3.73e-20,93;UBERON:0002371,7.45e-20,76;UBERON:0001474,4.23e-17,82;UBERON:0003081,3.20e-16,203;UBERON:0000178,4.22e-16,15;UBERON:0000179,4.22e-16,15;UBERON:0000463,4.22e-16,15;UBERON:0002384,7.19e-15,371;UBERON:0004765,4.59e-14,90;UBERON:0001434,4.70e-11,100 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,1.52908960491121,0.527533956456907,0,0,0.672325146451775,1.20538905604795,0,0.487932798790507,0.123121058076788,0,0,0,0,0,25.140010491076,30.5414192753798,25.8958470522005,2.36018566109342,1.15148819429164,1.70297735647684,0.919421224478927,0.90361775633475,0,1.39440961044543,1.27952309238679,2.05520307534393,0.553995408531877,1.80490002723128,1.73608696572681,2.46307021663917,2.26725566213286,1.80302897343931,2.32637182047304,0.755751887377619,0.970336244751265,2.78914844286822,0.411167888021826,1.23882548358041,2.01384674625505,0.768482119587302,0.709446689665756,3.7922024881028,0.645484683583826,1.35426486594342,2.63539275359647,1.09162460023138,2.24723484445085,2.75475503133812,1.28371610830437,1.91801137739712,4.28806690242731,1.99463657621632,1.70489900213078,1.7412554317715,3.97169657283798,0.622822248995575,3.26623264833766,2.08593167368081,1.08594422352558,2.42159801053347,1.84138817993782,2.21523671208619,3.16882929467913,4.25208599930087,2.30624510059213,3.70684482783434,3.75442232103766,2.4108838004562,5.13022938734247,5.9675003159727,2.92262646023414,1.75996244461323,1.63841583378639,8.00558328477199,3.84057200309856,2.40237592221607,5.74752439954483,2.64417949113945,1.90810750907073,2.27685187643779,2.34894875748376,2.29363936875137,5.28685314316103,2.24203425192614,1.58030450865046,1.37696839079683,6.28817220398664,5.96244347098577,4.51403537554831,2.28145586643513,3.78758244587787,7.79306913631645,4.34500781852177,7.07054177939609,5.53834736459053,0.812411591295047,4.86747014957566,3.77172107923647,4.76869923350661,4.42160028457357,5.506258628966,3.41059095272739,3.21048993707656,6.27213142829861,5.21222976408804,2.29932296161153,2.74901956386104,2.53019692019503,3.18565414324097,1.95325036156926,2.85135613334512,1.6563263098555,1.53583933385302,0,2.60454977248419,0,2.41928091869679,3.20928234940209,2.60683926989038,0,0,0.255725123687061,0,0,0,0,0,0.283604451492204,0,0.263504357079378,0.654895377488563,1.09288586487763,0,2.92092654289215,2.08955684759121,3.85578085504709,0.953962497221368,1.14398982156026,1.85728750664782,1.59009925893364,0.860234595106124,0,1.13061588384802,0,1.37559020970034,1.46296476575767,0.775250277507987,1.42306505074684,0.66944122552934,0,0.760272105718513,0.24406205754817,0.735326160691737,0.81014194788176,1.16089646769304,1.57170560838319,0.788280363383256,0,0.949265659568129,2.01521918323448,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0.560677600142307,2.1349799145941,0,0.622422070799533,0.67355336034844,0.817309515567294,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,1.36118619792025,0,0,0,0,0,0,0,0.168776332241266,0.389748020644795,0.252433774244115,0,0,0.710019185033229,1.41052937518696,0.339121184620975,0.386521706326594,0.818238361772504,0.860413786167011,0,0,0,0.414644220061482,0.252320850875628,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,1.2347220339942,1.47008711385542,0,0,0.590789906681404,3.97316789473185,0.122988438543114,0,0,1.1240175325762,0.301586917234893,0.0925884451585296,0,0,0,0.579652024875384,0.117408694235822,0.577465791044295,0,0.380508304469197,0,0,4.18568910348575,59.6710876105056,13.9713292551405,0,0.16798212819886,0.283550194484773,0,0,0,3.94130590316755,1.40877494421162,2.90259361757081,4.03535869567492,2.77733353538036,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,4.01805673145701,6.32501818449095,0.239624855491583,0,0,0.289562613335158,0,0,2.57795831185113,2.1673383622212,3.66566877261179,2.56686072559497,0.254094624222463,0,0,0.502548796003046,0,5.24304916763028,23.932916736322,13.2612964299531,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,2.27444828735176,6.25571182373989,2.45473382947922,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0.231046011313244,0.784349769176855,0,0.105551628892876,1.13733384070897,1.02056223165909,0.863663664408557,3.08454505380579,0,0.501689773854853,0,0,0,0.219259876645935,0.784306353074702,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0.6970372701606,0.616067160352178,0.532306030317022,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0.78494864019923,0,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0,0,0.876901770507525,0,0.655894752046633,1.62328301570163,1.8589409885985,0,0,0,1.426684205925,0.709522128141196,0,0,0.379473173765715,0,0.192444225451024,0.670302275535787,1.08890984861323,0.659006605437454,0,0,0.443430153536676,0.229723400206959,36.028780255484,26.7623022499831,35.8877727919722,18.8203102611653,12.752230465672,24.6419858253233,34.0219805460012,35.6906329332422,0,0,1.71528151186722,1.30062222588003,0.721346064882224,0.853702120180969,2.07254154547469,1.99579371432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| |||
|short_description=p6@ARHGDIB | |||
}} |
Revision as of 12:26, 11 January 2014
Short description: | p6@ARHGDIB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARHGDIB_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_AB451315, AB451445, AB464153, AF498927, DQ893303, DQ896476_5end |
EntrezGene: | ARHGDIB |
HGNC: | 679 |
UniProt: | P52566 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.07e-36 | 98 |
blood island | 6.07e-36 | 98 |
hemolymphoid system | 5.57e-32 | 108 |
immune system | 3.73e-20 | 93 |
bone marrow | 7.45e-20 | 76 |
bone element | 4.23e-17 | 82 |
lateral plate mesoderm | 3.20e-16 | 203 |
blood | 4.22e-16 | 15 |
haemolymphatic fluid | 4.22e-16 | 15 |
organism substance | 4.22e-16 | 15 |
connective tissue | 7.19e-15 | 371 |
skeletal element | 4.59e-14 | 90 |
skeletal system | 4.70e-11 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.01e-13 | 51 |
immune system cancer | 1.01e-13 | 51 |
leukemia | 3.52e-10 | 39 |
myeloid leukemia | 7.23e-09 | 31 |