FFCP PHASE1:Hg19::chr12:9980015..9980039,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=51348 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13342 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NZS2 | |||
|association_with_transcript=-37bp_to_ENST00000279544,ENST00000279545,ENST00000324214,ENST00000354855,NM_016523,uc001qwm.2,uc009zgw.2,uc009zgx.2,uc009zgy.2,uc009zgz.2,uc009zha.2,uc010sgw.1_5end | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_2_at_KLRF1_5end | |||
|id=chr12:9980015..9980039,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.19e-25!18;CL:0000789!1.19e-25!18;CL:0002420!1.19e-25!18;CL:0002419!1.19e-25!18;CL:0000790!1.19e-25!18;CL:0000625!3.38e-22!11;CL:0000738!1.02e-19!140;CL:0002087!7.72e-18!119;CL:0000084!4.26e-17!25;CL:0000827!4.26e-17!25;CL:0000037!1.62e-13!172;CL:0000566!1.62e-13!172;CL:0002031!1.92e-13!124;CL:0000838!4.75e-13!52;CL:0000542!1.11e-12!53;CL:0000051!1.11e-12!53;CL:0000988!4.66e-12!182;CL:0002032!1.93e-10!165;CL:0000837!1.93e-10!165;CL:0000623!1.19e-07!3;CL:0000825!1.19e-07!3;CL:0000767!2.21e-07!3;CL:0000842!3.89e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;5.68e-47;11!CL:0000791;5.81e-33;18!CL:0000789;5.81e-33;18!CL:0002419;5.81e-33;18!CL:0000084;5.39e-23;25!CL:0000623;6.27e-15;3!CL:0000767;2.21e-14;3!CL:0000226;8.13e-14;3!CL:0000842;8.13e-14;3!CL:0000542;2.33e-10;53!CL:0000094;3.77e-09;8!CL:0002393;5.49e-07;6!CL:0002397;5.49e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,5.10e-47,11;CL:0000791,5.50e-33,18;CL:0000789,5.50e-33,18;CL:0002420,5.50e-33,18;CL:0002419,5.50e-33,18;CL:0000790,5.50e-33,18;CL:0000084,5.18e-23,25;CL:0000827,5.18e-23,25;CL:0000738,9.17e-22,136;CL:0000838,1.33e-20,52;CL:0000542,3.88e-20,53;CL:0000051,3.88e-20,53;CL:0000037,2.56e-16,168;CL:0002087,5.14e-16,115;CL:0000988,3.83e-15,177;CL:0000623,6.27e-15,3;CL:0000825,6.27e-15,3;CL:0000767,2.42e-14,3;CL:0000226,8.31e-14,3;CL:0000842,8.31e-14,3;CL:0002032,5.01e-11,161;CL:0000837,5.01e-11,161;CL:0002031,5.62e-11,120;CL:0000094,3.73e-09,8 | |||
|ontology_enrichment_development_v019=CL:0000790;5.81e-33;18!CL:0000051;2.33e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.11e-18!115;UBERON:0000178!2.66e-18!15;UBERON:0000179!2.66e-18!15;UBERON:0000463!2.66e-18!15;UBERON:0002390!6.45e-14!102;UBERON:0003061!6.45e-14!102;UBERON:0002193!1.40e-13!112;UBERON:0004177!3.94e-09!7;UBERON:0002370!2.09e-07!4;UBERON:0005058!2.09e-07!4;UBERON:0009113!2.09e-07!4;UBERON:0003295!2.09e-07!4;UBERON:0005562!2.09e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.04e-40;15!UBERON:0000179;6.04e-40;15!UBERON:0000463;6.04e-40;15!UBERON:0002390;1.60e-22;32!UBERON:0002193;4.44e-12;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.20e-40,15;UBERON:0000179,7.20e-40,15;UBERON:0000463,7.20e-40,15;UBERON:0002390,3.04e-11,98;UBERON:0003061,3.04e-11,98;UBERON:0002193,8.05e-10,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.26064981382698,21.1106168953467,7.7408061658038,0,0,0,0,0,0,7.75593571944628,3.20871115952227,3.90619567288533,0.223915474239924,1.29557466407592,0.515151135268373,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0.612167784741805,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0,0,0.59675003159727,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,3.36305137788922,0,0.786839080455332,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29932296161153,0,1.26509846009751,6.37130828648194,7.81300144627702,17.1081368000707,7.98048131112196,16.1263130054567,7.49584359314075,11.1285308460688,13.9591759476578,8.66908995866349,3.4767225451856,2.75166367377318,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0.476981248610684,1.71598473234038,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,41.9675519230105,19.4064817373566,26.3103224373484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82334486205528,6.90285442619574,7.68438416184799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,1.03558180854457,0,0,0,0,11.1638474031077,8.41100927856613,4.5571774973933,11.6733569974317,13.1635927387582,3.24236655596359,8.64050299580984,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,1.94748663751304,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,1.70859860108311,1.25763444079733,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.0887023701626388,1.15233987555779,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,3.57138888323444,1.22469987149797,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.258355639344024,0.248298857183432,0,0,0.202117188958219,0,0,0.134704106029175,0.286888821570705,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p2@KLRF1 | |||
}} |
Revision as of 12:03, 11 January 2014
Short description: | p2@KLRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_2_at_KLRF1_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -37bp_to_ENST00000279544, ENST00000279545, ENST00000324214, ENST00000354855, NM_016523, uc001qwm.2, uc009zgw.2, uc009zgx.2, uc009zgy.2, uc009zgz.2, uc009zha.2, uc010sgw.1_5end |
EntrezGene: | KLRF1 |
HGNC: | 13342 |
UniProt: | Q9NZS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 5.10e-47 | 11 |
mature alpha-beta T cell | 5.50e-33 | 18 |
alpha-beta T cell | 5.50e-33 | 18 |
immature T cell | 5.50e-33 | 18 |
mature T cell | 5.50e-33 | 18 |
immature alpha-beta T cell | 5.50e-33 | 18 |
T cell | 5.18e-23 | 25 |
pro-T cell | 5.18e-23 | 25 |
leukocyte | 9.17e-22 | 136 |
lymphoid lineage restricted progenitor cell | 1.33e-20 | 52 |
lymphocyte | 3.88e-20 | 53 |
common lymphoid progenitor | 3.88e-20 | 53 |
hematopoietic stem cell | 2.56e-16 | 168 |
nongranular leukocyte | 5.14e-16 | 115 |
hematopoietic cell | 3.83e-15 | 177 |
natural killer cell | 6.27e-15 | 3 |
pro-NK cell | 6.27e-15 | 3 |
basophil | 2.42e-14 | 3 |
single nucleate cell | 8.31e-14 | 3 |
mononuclear cell | 8.31e-14 | 3 |
hematopoietic oligopotent progenitor cell | 5.01e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.01e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 5.62e-11 | 120 |
granulocyte | 3.73e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 7.20e-40 | 15 |
haemolymphatic fluid | 7.20e-40 | 15 |
organism substance | 7.20e-40 | 15 |
hematopoietic system | 3.04e-11 | 98 |
blood island | 3.04e-11 | 98 |
hemolymphoid system | 8.05e-10 | 108 |