FFCP PHASE1:Hg19::chr12:7818491..7818523,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=604 | |||
|TSSclassifier=strong | |||
|UniProt=P41238 | |||
|association_with_transcript=0bp_to_ENST00000467171,NM_001644,uc001qtb.2,uc001qtc.2_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_2_at_APOBEC1_5end | |||
|id=chr12:7818491..7818523,- | |||
|ontology_enrichment_celltype=CL:0002178!2.78e-16!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!1.22e-23!2;DOID:0050619!2.06e-13!1;DOID:1357!2.06e-13!1;DOID:299!1.89e-11!25 | |||
|ontology_enrichment_disease_v019=DOID:0050619;3.58e-26;1!DOID:1357;3.58e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.58e-26,1;DOID:1357,3.58e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!3.72e-20!35;UBERON:0000945!1.27e-13!8;UBERON:0010039!1.27e-13!8;UBERON:0001764!2.06e-13!1;UBERON:0001825!2.06e-13!1;UBERON:0000160!1.18e-10!27;UBERON:0004921!1.76e-09!129;UBERON:0004185!1.76e-09!129;UBERON:0001007!3.16e-09!155;UBERON:0001555!3.16e-09!155;UBERON:0007026!3.16e-09!155;UBERON:0004119!2.50e-08!169;UBERON:0000925!2.50e-08!169;UBERON:0006595!2.50e-08!169;UBERON:0002108!8.66e-08!14;UBERON:0002294!1.47e-07!7;UBERON:0001173!1.47e-07!7;UBERON:0004912!1.47e-07!7;UBERON:0003127!3.28e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;3.47e-45;4!UBERON:0000160;1.43e-34;17!UBERON:0005409;3.71e-27;22!UBERON:0001764;3.58e-26;1!UBERON:0001825;3.58e-26;1!UBERON:0004921;1.39e-16;33!UBERON:0003127;1.46e-13;2!UBERON:0001155;5.37e-12;9!UBERON:0000059;5.41e-10;11!UBERON:0002114;1.41e-09;2!UBERON:0001555;7.72e-08;54!UBERON:0000922;7.66e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.47e-45,4;UBERON:0000160,1.38e-34,17;UBERON:0001764,3.58e-26,1;UBERON:0001825,3.58e-26,1;UBERON:0005409,4.40e-24,25;UBERON:0003127,1.55e-13,2;UBERON:0001155,5.22e-12,9;UBERON:0000059,5.29e-10,11;UBERON:0002114,1.41e-09,2;UBERON:0004921,1.39e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.1380959343072,1.83309043480088,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0.576361668616424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38154252376101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,26.3935620729171,6.55678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64961072403156,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@APOBEC1 | |||
}} |
Revision as of 11:54, 11 January 2014
Short description: | p2@APOBEC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APOBEC1_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000467171, NM_001644, uc001qtb.2, uc001qtc.2_5end |
EntrezGene: | APOBEC1 |
HGNC: | 604 |
UniProt: | P41238 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 3.47e-45 | 4 |
intestine | 1.38e-34 | 17 |
maxillary sinus | 3.58e-26 | 1 |
paranasal sinus | 3.58e-26 | 1 |
gastrointestinal system | 4.40e-24 | 25 |
open tracheal system trachea | 1.55e-13 | 2 |
colon | 5.22e-12 | 9 |
large intestine | 5.29e-10 | 11 |
duodenum | 1.41e-09 | 2 |
subdivision of digestive tract | 1.39e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.58e-26 | 1 |
maxillary sinus cancer | 3.58e-26 | 1 |