FFCP PHASE1:Hg19::chr12:7169907..7169929,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=716 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1247 | |||
|TSSclassifier=strong | |||
|UniProt=F5H7T4 | |||
|association_with_transcript=20bp_to_ENST00000542978_5end | |||
|coexpression_cluster_id=C424 | |||
|description=CAGE_peak_5_at_C1S_5end | |||
|id=chr12:7169907..7169929,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.84e-11!75;CL:0000055!5.91e-11!180;CL:0000136!4.19e-08!15;CL:0000680!2.05e-07!57;CL:0000056!2.05e-07!57;CL:0000355!2.05e-07!57;CL:0002334!5.66e-07!12;CL:0000187!7.18e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.15e-09;13!CL:0000499;3.04e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.88e-11,15;CL:0000499,2.68e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!9.91e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.74e-09!143;UBERON:0002100!1.06e-08!216;UBERON:0003104!1.74e-07!238;UBERON:0009142!1.74e-07!238;UBERON:0002385!2.66e-07!63;UBERON:0001015!2.66e-07!63;UBERON:0000383!2.66e-07!63;UBERON:0000475!5.07e-07!365;UBERON:0000914!6.32e-07!83;UBERON:0002329!6.32e-07!83;UBERON:0003077!6.32e-07!83;UBERON:0003059!6.32e-07!83;UBERON:0007282!6.32e-07!83;UBERON:0009618!6.32e-07!83;UBERON:0007285!6.32e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.97e-11;9!UBERON:0000042;4.97e-11;9!UBERON:0003688;2.43e-09;6!UBERON:0002358;2.43e-09;6!UBERON:0003684;2.43e-09;6!UBERON:0001178;2.43e-09;6!UBERON:0001013;1.80e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.54e-09,6;UBERON:0002358,1.54e-09,6;UBERON:0003684,1.54e-09,6;UBERON:0001178,1.54e-09,6;UBERON:0004457,6.10e-08,12;UBERON:0000042,6.10e-08,12;UBERON:0001013,1.40e-07,14;UBERON:0005256,1.82e-07,122;UBERON:0003104,2.55e-07,160;UBERON:0009142,2.55e-07,160;UBERON:0004122,6.71e-07,15 | |||
|phase1_expression=2.72517568905835,4.28201047781966,4.36958652697511,4.00293193412522,8.93922188854576,2.61701557230111,0,4.42203911398782,4.96252693579693,0,0,0,0,0.495065411840187,0.994192127183747,2.6893005858071,1.20538905604795,0.730310090387373,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.639312809217652,1.44575660953827,1.50401373190767,4.20054904986389,0.795285947051099,7.78615792484217,0,0,0.087834785693126,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.633152558322899,1.58891016975863,10.6129549677061,1.06400514659507,0.560677600142307,0,0.24666754841716,0.622422070799533,0.404132016209064,0.326923806226917,0.151357427644931,0.576175924479999,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0.245668634623536,0.103325781175765,5.94001428641027,5.19260551484969,0,0,0,0,0,0.438977620880838,0.919463387397059,3.30523729594513,0,0.358779271377724,1.92201649936711,2.33125091275518,0.900273288253207,1.23663035086127,0.772921620136887,0.558350568994769,1.0126579934476,0.292311015483596,0.504867548488229,2.20919756741518,6.7891343863901,0,0.403008392910561,0.67824236924195,0,0.545492241181669,0,0,0,0,0,0,0,1.56449532329816,1.92972281457866,0,0.928735856063958,0.721879481669586,0.709840800239063,0.674338760312407,0.482022059766964,0.330881918197182,0,0,0.269662616320329,0.392442930250692,0,0,0,0.4115740113314,0,20.2808055714929,18.6737171168749,5.90789906681404,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,1.03417372606222,0,0,1.32969058292435,0,0,0,0,2.00169191121407,2.17048642156577,0,0,2.48774364119782,0,2.41151501647669,3.48613383440118,1.59956785891291,0,0,0,0.239624855491583,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.71768088406796,0,0.271265023699736,1.45579603071565,1.60586089917446,0.315404830067869,1.7571212248907,0.300946099727719,4.5481500811197,0,0,0,1.65078867489357,0,0,0,0,0,0,0,0,0.992431231275107,1.84154367945675,1.96462066103151,1.79394808957981,1.53512174720011,1.44768529029247,2.96836132889982,0.462629081407967,0.532685175939381,0.328508624055237,0.519254429183621,0.348631135379878,0,0,0,2.41110341145674,1.45672934405374,5.37610101333639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,3.29731237272711,0,0,0,0,6.42735719376638,0.773365746336976,0.308097234229289,0,0,0.966782203814463,0.290033387828457,0.0852266274161009,1.06838442776085,0,0,0,0,0,1.5740617341532,0,1.84820148105653,0,0.869932992075073,0,0.286249773483982,0,0,0.571890581771475,0,1.71175595213568,0,0.78494864019923,0.719489830333259,0.274537029736055,0.942499218765491,0,0,0.421258456238981,0.48763373908959,6.33655073041339,1.05650146756755,1.22849920267187,3.11091950298168,2.26016233240486,0,1.99031692572366,0.438450885253763,0.578775534266688,1.31178950409327,0,0.6196469961995,0,0.143411352204052,0.196498082026242,0,1.41904425628239,8.44430541190656,10.8667314676768,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0.23874448473769,0,0,0,0,0,0,0,1.19548792950642,1.10513566212459,0,0,0,2.17727711363265,0,0.179021174675609,0,1.57829449019094,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0.438770794307945,0.10893846351899,0,1.38510465306835,1.48124672601102,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0.619202951523374,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0.30607276163049,3.41207529993835,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,3.84398670132466,0,0,0,0,1.26085721434945,0,1.35588444468319,0,0,0.126621591911757,0,0.64127056201227,1.06726497369676,0.39961921916426,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0.917983958726896,0,0,0,0,0,0,1.95497680890578,0.229160424011684,2.15361907373044,0.399358000997982,0.429226048136571,0.446342914883745,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,0.104909176269996,0,0.179287339332845,0,4.2881719582402,0,0,1.62899880526114,0,0.326587360109409,0,0,0.170388021785422,0,7.03450721654796,1.32506888912221,0,0,0,0,0.533937062838473,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,1.08803560673895,0.5013797880454,0,0.327872630709804,0,0,0.244052529803926,0.1251909307065,0,0,0.310482014706917,0,0,0,0,0.470531639396343,0,0,0.447764408660622,1.16856654923612,1.66441758450784,1.13641803165053,2.0125432140206,5.33886732957922,1.144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| |||
|short_description=p5@C1S | |||
}} |
Revision as of 11:52, 11 January 2014
Short description: | p5@C1S |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C1S_5end |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | 20bp_to_ENST00000542978_5end |
EntrezGene: | C1S |
HGNC: | 1247 |
UniProt: | F5H7T4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.88e-11 | 15 |
stromal cell | 2.68e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.54e-09 | 6 |
peritoneum | 1.54e-09 | 6 |
abdominal cavity | 1.54e-09 | 6 |
visceral peritoneum | 1.54e-09 | 6 |
cavity lining | 6.10e-08 | 12 |
serous membrane | 6.10e-08 | 12 |
adipose tissue | 1.40e-07 | 14 |
trunk mesenchyme | 1.82e-07 | 122 |
mesenchyme | 2.55e-07 | 160 |
entire embryonic mesenchyme | 2.55e-07 | 160 |
genitourinary system | 6.71e-07 | 15 |