FFCP PHASE1:Hg19::chr12:4382956..4382975,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1583 | |||
|TSSclassifier=strong | |||
|UniProt=P30279 | |||
|association_with_transcript=18bp_to_ENST00000261254_5end | |||
|coexpression_cluster_id=C539 | |||
|description=CAGE_peak_2_at_CCND2_5end | |||
|id=chr12:4382956..4382975,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.95e-12!115;UBERON:0001869!2.75e-09!32;UBERON:0003080!3.32e-09!42;UBERON:0001893!3.67e-09!34;UBERON:0002780!5.24e-09!41;UBERON:0001890!5.24e-09!41;UBERON:0006240!5.24e-09!41;UBERON:0000956!5.74e-09!25;UBERON:0000203!5.74e-09!25;UBERON:0002020!6.30e-09!34;UBERON:0003528!6.30e-09!34;UBERON:0002791!7.28e-09!33;UBERON:0001049!1.43e-08!57;UBERON:0005068!1.43e-08!57;UBERON:0006241!1.43e-08!57;UBERON:0007135!1.43e-08!57;UBERON:0001017!1.86e-08!82;UBERON:0002619!3.46e-08!22;UBERON:0001950!1.04e-07!20;UBERON:0005743!1.06e-07!86;UBERON:0002616!3.55e-07!59;UBERON:0003056!6.77e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.97e-09;25!UBERON:0000203;3.97e-09;25!UBERON:0001869;1.12e-08;32!UBERON:0002791;2.40e-08;32!UBERON:0002619;2.48e-08;22!UBERON:0001893;3.39e-08;34!UBERON:0003528;4.51e-08;34!UBERON:0002020;4.51e-08;34!UBERON:0001950;7.62e-08;20!UBERON:0002780;3.90e-07;41!UBERON:0001890;3.90e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.80e-12,114;UBERON:0001869,1.96e-09,32;UBERON:0001893,2.62e-09,34;UBERON:0002780,3.77e-09,41;UBERON:0001890,3.77e-09,41;UBERON:0003080,3.77e-09,41;UBERON:0006240,3.77e-09,41;UBERON:0000956,4.14e-09,25;UBERON:0000203,4.14e-09,25;UBERON:0002791,4.54e-09,32;UBERON:0003528,4.55e-09,34;UBERON:0002020,4.55e-09,34;UBERON:0001017,1.42e-08,81;UBERON:0001049,1.93e-08,56;UBERON:0005068,1.93e-08,56;UBERON:0006241,1.93e-08,56;UBERON:0007135,1.93e-08,56;UBERON:0002619,2.58e-08,22;UBERON:0010371,4.06e-08,104;UBERON:0000073,7.29e-08,53;UBERON:0002616,7.29e-08,53;UBERON:0001950,7.90e-08,20;UBERON:0003075,3.22e-07,82;UBERON:0007284,3.22e-07,82;UBERON:0003056,8.93e-07,61 | |||
|phase1_expression=2.36181893051724,3.21150785836475,3.94672331468719,10.007329835313,10.7270662662549,2.61701557230111,5.06599756336621,43.5886712664513,12.7980957817921,23.8361918406464,11.1648186875588,40.1932124719517,42.7302504730095,1.73272894144065,2.98257638155124,20.1697543935533,22.9023920649111,21.1789926212338,14.1500511649247,3.57051068422685,0.204000691244253,3.44800193625897,35.20702641712,11.4974517061223,34.6497685281656,129.06224230829,138.667895580958,118.617147439715,14.1611139665605,16.8884935162774,10.8371286321253,49.6487461218621,56.3255068115328,31.429090864177,0,0,19.9648298747696,6.09394949385065,8.82395568868623,9.54847831149748,0.223915474239924,3.88672399222775,0,2.90796477559129,6.42389104270976,2.91100873425379,2.55671940596253,18.0913870729603,13.3173739484895,4.31538588483226,11.5272317938095,4.49316236788312,6.55016793399575,18.719055823931,6.77132432971709,9.03563229804502,17.73889975376,4.71919317334678,7.95818120164347,20.8603867599461,12.7867425159808,1.64925650093358,4.9865914405408,2.98357325372886,3.48251086354301,9.64554881974938,4.9825779919646,10.3011952755265,9.90817544998383,6.08128765174327,6.05399502633369,4.41933163185078,1.89877432464531,0.422510572623884,0.425208599930087,0.838634582033504,1.79725809834392,0.450530678524519,0.64290234678832,0.285012743741249,0,0.182664153764634,1.75996244461323,3.82297027883492,1.77901850772711,3.84057200309856,1.20118796110804,4.02326707968138,3.96626923670917,1.90810750907073,3.41527781465669,5.28513470433845,4.20500550937752,33.0428321447565,20.7388168303168,24.7581039688572,15.343362068879,22.7946242394516,27.5506008659342,45.4747267462644,13.0368906653436,8.99550830895993,7.79306913631645,35.4285252894852,24.1576844129366,19.0519149341914,10.8321545506006,42.2701355094728,43.3097627374395,40.4517245325043,35.9255023121603,30.1395209164455,12.0112116161269,9.09638815505025,8.36284190439814,31.7266159553185,14.1791582632711,16.8377448286489,16.4462799812677,16.8839669591771,13.0216690771284,15.207232711174,12.7988851216107,16.1263130054567,11.2437653897111,18.7054029114773,15.6014319414999,24.7976294166421,31.8253832982374,23.027080217365,9.75227465255847,1.34140171940727,15.5992325449107,0.722878304769133,2.50668955317945,0.144846518960824,7.15757352345989,15.5723158496843,1.41802225746102,3.76939975686359,1.66886092816939,11.6571377192964,46.2655016131529,40.4155042635028,3.24547393654683,3.83085422058388,10.9025527625469,0.715471872916026,2.28797964312051,1.11437250398869,1.19257444420023,4.30117297553062,0.347140501607594,0.56530794192401,7.1314904155684,4.67700671298115,9.8227634272301,19.3812569376997,29.8843660656837,68.9524462295221,51.96498190708,15.9657142200888,86.6420304296002,5.8826092855339,34.0259618110339,0.892997282840798,0.898117490504679,1.23872628531654,1.53316637465883,0.949265659568129,1.83201743930407,1.31780417436063,3.87780264148325,63.2336375606675,5.96366342034382,4.30543739659571,33.896750288184,3.15520282823695,3.19201543978521,12.3349072031308,6.4049397437823,7.64669400093196,11.5148083097914,1.61652806483626,5.39424280274414,6.65972681637698,2.30470369792,18.9800359785375,10.6134426122309,5.70471821544449,5.82849854152024,18.0849127911398,10.8454872726648,11.2360645361799,0.408308342509787,3.68502951935304,0.309977343527296,0,0.741800787835671,6.37112953356618,12.2165084108761,2.35670559535693,4.12891115577482,1.38532057742091,0,0,0,9.1880068359617,0.358779271377724,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0.276149695926898,0.323292113637624,0.355009592516614,0,0,63.0030381312348,114.007878406969,242.923492294486,26.7122416423814,15.9035721985782,28.235128117293,25.5006195337811,24.475122534936,4.01475094983413,0,0,1.38134921352481,1.85747171212792,5.0531563716871,0,0,0,0,0,0,0,0,0,11.0723318193697,5.60967095213783,13.5819423739362,5.88034845542168,0,0,0,0,3.07471096357784,3.94605963686609,106.787027702593,51.704806498505,37.6983646543616,98.606694093834,22.8065813717227,1.03993478527958,2.88662684050547,5.91245065372892,14.9109041679494,13.5704460895409,7.87075371380238,11.6055032863105,0,0,0.492434012174795,2.34004265139238,2.22946743433092,74.0497288495538,59.6336555105951,86.7663595123405,23.016540334632,38.363679883843,55.9738711581208,1.97065295158377,0.528290604079356,4.97587477297853,3.60299883542404,2.27236380167484,0.317489471460845,0,0,10.2643467613623,0.514137463516618,0,0,0.897048674762886,6.5394010324992,0.7333828582095,1.03417372606222,0,5.071816515336,0.531876233169741,2.08014873822732,0.514414748524284,1.41849132023278,0.799266537048298,3.14551586047925,4.88359444852299,7.40916303102692,3.90883421152482,3.19852753868291,0.791951872933429,100.379312560842,117.65701691104,94.1745576934977,0,0,2.10833939483032,10.7831184971212,1.14861935834114,1.42636905040718,0.868687840005475,0,2.86497541183833,39.9023112616957,21.0822913416062,29.3253501808944,29.0055261992231,67.8432646673977,93.7006947774876,34.7979965749963,41.3765175375841,48.4833451256404,2.99602809578873,5.9832291840805,3.72973962092432,1.59498939234882,0.500170521059677,1.35632511849868,0.415941723061614,0.535286966391485,0.630809660135739,0.117141414992713,27.6870411749501,25.0148254461583,10.3473071292505,0.664225598535437,1.29058417979192,2.69339204851057,1.37060810223918,7.54915532383883,11.7857774890046,12.942852049117,27.4289823554852,33.9502880019811,168.099793905602,112.186798825311,1.48864684691266,3.99001130548962,0.841980283299221,1.53766979106841,3.58195074346692,3.53878626515936,1.48418066444991,1.07946785661859,1.42049380250502,0.410635780069046,0.519254429183621,3.1376802184189,5.80125358039787,109.075519844987,28.0847016254484,1.03333003348146,0.728364672026868,1.83574180943194,11.7311899355927,11.4752852285578,0.784349769176855,4.38417673959782,6.9664075069298,1.13733384070897,5.10281115829547,3.02282282542995,3.08454505380579,1.89662506280697,2.50844886927427,0,0,0.671624264166535,1.53481913652154,1.3071772551245,3.07740150139667,0,0.650756789328606,6.4915837338065,0,0,164.814209404901,187.217350858518,1.6068392984416,11.7938276316389,6.47004191881506,10.2847462066507,10.4755795088243,6.98231591643779,8.1209348591968,10.3976485447643,16.2928625233529,36.8585361254981,59.3867308158178,58.8294604600033,42.1827946167643,2.78907329578371,4.40737285562896,0.6970372701606,2.15623506123262,7.45228442443831,0.869932992075073,8.52491407878032,39.9318434010156,8.93180086463202,1.89827654831236,1.71567174531442,22.5190056353974,6.41908482050881,0.636406495851874,1.56989728039846,17.4476283855815,19.4921291112599,20.0281083987667,6.67202189191943,22.1914449642212,2.10629228119491,8.28977356452303,2.92456187557541,0,1.22849920267187,26.584221207298,4.52032466480971,0.551365343546124,7.29782872765342,13.5919774428666,32.9902054532012,7.21484227251296,16.6386509109417,10.8438224334913,1.97186921772569,19.360532547547,11.2003906754958,20.3302499344313,3.19284957663538,0.844430541190656,0.329294892959902,5.31262443272001,6.64875968465468,30.0212991703598,54.9647865939346,34.8451151556232,5.83691564816031,57.6877199379448,70.7580197804027,42.5692947395209,31.7018292285604,6.5968189200182,10.7049208999933,10.2536493691349,8.81457569193819,4.11362273086194,7.13320642311989,5.40031437238115,10.3106272918255,31.4062769114771,3.84991942105343,0,0,0,0,7.01475600006818,2.79411120005943,11.6818275780744,37.2545505594034,8.11554850686389,2.80797178113459,0,45.9072094614958,22.557102938106,28.1024351150661,0,0.201799707191048,0,15.1142351692536,0,0,0,13.0910023919367,0,0,20.5546315641747,70.6112572155378,9.86909035614947,32.9367351118467,8.49747439776985,0.121360521749513,29.1981666806993,0,37.2441396190796,13.0664459566361,25.187177572137,25.8478388419237,29.8219162790287,0.111308705022906,0.16480387422676,0.844501632511974,37.8571177677033,13.8141957765574,0,0.102268682502155,68.6813214472768,13.0636626817959,0,0,3.5810065915881,27.3242233614306,14.3689855408164,0,30.0493151289518,16.5127214728095,37.9266216202269,0,0,19.5749885367394,34.3656213822209,0,0,0,1.74962768029953,0,7.97167247232455,13.6273975646711,9.15490417902499,8.0722859749794,6.79759523593159,12.9437384320844,0,24.8174264815914,18.6219625579189,0,0,0,0.434589487688032,8.29403015302991,24.3649598448954,3.73124343213044,0,37.3613010220159,9.80648923210923,15.3405049219683,10.1952517845225,13.7613701320191,9.67744036893344,0.317873157960757,0,0,6.50224128596128,63.1854828046906,32.8436437255907,18.3107158521912,29.9404771017476,55.4494510632763,53.1324937469962,58.1630258745386,9.70576314921749,19.2618635351709,11.4789578405416,108.378144794106,3.52196314077761,0,26.4371549909092,36.2972148145992,37.0348041572893,8.53018824984587,5.41164309892173,3.11064574191741,0,0,0,0,15.6535250316386,0.416024019039416,0.520679215005393,0.0979923974143777,25.6824659412188,26.2090002363045,0,0,0,0,14.1603964073092,0.0882561266915003,24.631900745078,9.86701857456606,0,19.81627913419,0,0,9.17847877379216,0.19980960958213,2.01726584015748,3.32156128881155,0,0,0,0,0,0,0,0,11.407985485486,10.2679034168995,17.8845223293761,1.28929632425987,39.4331031418972,29.8832169361312,33.6865823297175,15.0753335161131,31.3496030783416,86.2744356754507,53.1148068711657,59.7932905131864,0.720599767084807,10.4846354574708,0.236349546921671,0.329663433524666,0.13480708770837,0,29.8896862192219,18.290282865614,28.7389186895425,14.7892896587818,18.0176661942376,17.863934535255,28.7966581185921,24.7616625458544,22.2950872934951,0,2.67939404817274,12.0121006829146,0.105600336519406,0,29.746855584514,54.3168448043759,39.0634262515605,0,0,0.864221491201268,2.28611152076586,0,68.6293473464474,1.02232813071253,0,0.732761168390412,1.32506888912221,14.4796911124937,8.33065390978947,0,0,8.97014265568635,12.7335487130729,11.1844544943743,25.3044671124095,172.514954646905,0,8.29843635101236,21.760712134779,13.2865643832031,23.2822638340231,6.55745261419609,0,15.0631590594388,22.4528327419612,23.786276834235,3.44045517414043,12.6459118752012,10.6184849029766,72.6330333415212,0,0,0.285465333544967,0,0,0,4.0298796779456,3.73941295755559,5.54805861502613,1.32582103692562,2.26411111577318,0.889811221596536,3.20376095755693,1.81477108515887,0,0.295710299979268,7.16835452236661,2.24901556081802,4.192099835659,2.48823724704513,5.0509925766019,9.39141111261121,14.5749880727302,52.170314067125,12.6129927293445,0.181848659202559,8.59284456339908,0.464033759878494,25.0800409880128,0,0.686791410365586,0.336749488765919,23.9751306634437,0,1.71553273099941,2.3489486276869,0,0,0,0,0.926404341482917,0,0,2.12205442098006,0,0.256241518587947,0,0,26.8221366134358,1.94860308839388,2.25870228532717,5.07052722193117,0,0,12.6787274015176,165.989538559592,1.92045113449454,46.670259488081,0.567515953566836,0,25.4580704049389,30.4817857416157,0,0,0,0,5.09197589862076,7.22754728345722,0.371807292777007,34.0773399963679,0.954013051960256,0,0,4.23211132428821,0,19.4614552042272,34.0071783181404,32.0864056704874,22.7679164307238,45.624977016131,23.5826230902983,20.3459313496132,7.13847101295772,0,0,29.5320043619903,57.4162560767181,1.52552838186867,7.59395918666111,0.397832444232549,14.1395417296604,0,13.2857381909626,0,0,0.147856086217045,26.5422707550291,16.4026400708908,31.0030194751776,22.8296916698065,63.9960526551317,3.83780436800028,12.4052794597324,0,5.23825953322341,5.35701835878287,5.71682327772001,16.9950369186257,22.5385569437785,11.4426057509804,24.544839349381,0,10.2634296795016,23.4808801619371,0,0,19.544780119778,11.4694380638681,18.7782349420239,64.8342691561742,0,0,16.5825582489843,16.4334156202036,0,81.8872462545149,3.20684545892101,52.6329056974114,42.8503377505814,25.5766074871214,3.01159151174194,0.118332000730565,0.0852134047591577,25.8266100616467,0,0,0,0,0,0,0.647428837187895,1.53994210284371,46.392577253528,32.0569255419032,0,0.596852325484105,1.30812099855325,0,17.9203042295049,0,19.9109327918497,46.3346268268389,0,49.5199609942889,0,23.5570160537934,14.5552736160272,22.4007535619202,1.52934403219035,14.2855555329377,16.4367614332622,60.1645758668072,0,21.5265871746572,0.0802413666891683,11.6853822119443,6.88093925106811,9.89043123745014,88.036531703797,26.6526641548386,51.0530307698242,19.5739930990698,0,6.47045880083986,0.432626562123789,45.6722457902986,4.47988845051152,202.970998620322,10.3008718039402,90.0522655744939,175.427363212019,98.7787704811958,7.35053372716922,4.01946195234268,4.1458471972939,12.7222584910131,5.75731751132648,35.2335358566336,7.94443590982875,10.4285520017041,0.224263725161227,16.3573196774884,39.4128518468528,5.87835219321796,34.9077967106987,13.4704106029175,8.53494244172849,17.9636592534847,0,0,5.7921684686082,0,82.124329841209,20.2920797343558,24.82066687726,10.6521083869682,17.5108200424193,95.5294107063634 | |||
|short_description=p2@CCND2 | |||
}} |
Revision as of 11:33, 11 January 2014
Short description: | p2@CCND2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCND2_5end |
Coexpression cluster: | C539_teratocarcinoma_diffuse_Gingival_Placental_lymphangiectasia_mycosis_Sebocyte |
Association with transcript: | 18bp_to_ENST00000261254_5end |
EntrezGene: | CCND2 |
HGNC: | 1583 |
UniProt: | P30279 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.80e-12 | 114 |
cerebral hemisphere | 1.96e-09 | 32 |
telencephalon | 2.62e-09 | 34 |
regional part of forebrain | 3.77e-09 | 41 |
forebrain | 3.77e-09 | 41 |
anterior neural tube | 3.77e-09 | 41 |
future forebrain | 3.77e-09 | 41 |
cerebral cortex | 4.14e-09 | 25 |
pallium | 4.14e-09 | 25 |
regional part of telencephalon | 4.54e-09 | 32 |
brain grey matter | 4.55e-09 | 34 |
gray matter | 4.55e-09 | 34 |
central nervous system | 1.42e-08 | 81 |
neural tube | 1.93e-08 | 56 |
neural rod | 1.93e-08 | 56 |
future spinal cord | 1.93e-08 | 56 |
neural keel | 1.93e-08 | 56 |
regional part of cerebral cortex | 2.58e-08 | 22 |
ecto-epithelium | 4.06e-08 | 104 |
regional part of nervous system | 7.29e-08 | 53 |
regional part of brain | 7.29e-08 | 53 |
neocortex | 7.90e-08 | 20 |
neural plate | 3.22e-07 | 82 |
presumptive neural plate | 3.22e-07 | 82 |
pre-chordal neural plate | 8.93e-07 | 61 |