FFCP PHASE1:Hg19::chr12:2904305..2904316,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2288 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3720 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AB385011,CU674888,DQ893668,DQ895800_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_FKBP4_5end | |||
|id=chr12:2904305..2904316,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;3.79e-11;4!CL:0002222;3.79e-11;4!CL:0002224;3.79e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,3.79e-11,4;CL:0002222,3.79e-11,4;CL:0002224,3.79e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.93e-17;10!UBERON:0005564;6.93e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.17e-15!57;UBERON:0005068!1.17e-15!57;UBERON:0006241!1.17e-15!57;UBERON:0007135!1.17e-15!57;UBERON:0007023!1.85e-14!115;UBERON:0005743!1.08e-12!86;UBERON:0001017!4.62e-12!82;UBERON:0000073!7.16e-12!94;UBERON:0001016!7.16e-12!94;UBERON:0002616!2.24e-11!59;UBERON:0003075!3.63e-11!86;UBERON:0007284!3.63e-11!86;UBERON:0002780!2.29e-10!41;UBERON:0001890!2.29e-10!41;UBERON:0006240!2.29e-10!41;UBERON:0002346!3.30e-10!90;UBERON:0003080!5.69e-10!42;UBERON:0000955!5.75e-10!69;UBERON:0006238!5.75e-10!69;UBERON:0001893!6.35e-10!34;UBERON:0002020!1.18e-09!34;UBERON:0003528!1.18e-09!34;UBERON:0002791!5.01e-09!33;UBERON:0001869!1.76e-08!32;UBERON:0000153!2.33e-08!129;UBERON:0007811!2.33e-08!129;UBERON:0003056!6.32e-08!61;UBERON:0001950!1.39e-07!20;UBERON:0003076!2.26e-07!15;UBERON:0003057!2.26e-07!15;UBERON:0000033!4.66e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.12e-21;8!UBERON:0003135;1.88e-15;11!UBERON:0010077;3.79e-11;4!UBERON:0005389;3.79e-11;4!UBERON:0000484;3.79e-11;4!UBERON:0000965;3.79e-11;4!UBERON:0001803;3.79e-11;4!UBERON:0000991;1.37e-08;21!UBERON:0003101;3.04e-08;22!UBERON:0000079;3.04e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.12e-21,8;UBERON:0003135,1.88e-15,11;UBERON:0010077,3.79e-11,4;UBERON:0005389,3.79e-11,4;UBERON:0000484,3.79e-11,4;UBERON:0002546,3.79e-11,4;UBERON:0000965,3.79e-11,4;UBERON:0001803,3.79e-11,4;UBERON:0003073,3.79e-11,4;UBERON:0005426,3.79e-11,4;UBERON:0000991,1.37e-08,21;UBERON:0009196,1.37e-08,21;UBERON:0009117,1.37e-08,21;UBERON:0005564,1.37e-08,21;UBERON:0004176,3.04e-08,22;UBERON:0003101,3.04e-08,22;UBERON:0000079,3.04e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,3.20898734969396,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0.427114777637135,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0.120859449591622,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0.512900250232778,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0.556812347790485,0,0,0,0,0.18714054040822,0.146508179271894,0,0.111443384277478,0.284136146806413,0,0,0.307160702099232,0,0.422008249231538,0,0.16480387422676,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0.87754158861589,0,0,0,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0.31396051279005,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0,0,0.13480708770837,0,0.169346664131569,0,0,0.160753148465019,0,0,0.2249738915515,0,0.425246896606173,0.335434687599266,0,0.104909176269996,0,0,0,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0.340776043570843,0,0.146552233678082,0,0.129282956361551,0.26446520348538,0,0.704815022316672,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.443716206147409,0.434674820589684,0.138348634936231,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.276516872303462,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0.256916900385838,0,0,0.615349092722265,0.756215088665154,0.276629009856872,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0,0.19024743058172,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.475788130837822,0.789273282754189,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0.196300467230486,0,0,0,0,0,0.233939463462106,0,0.356760272332706,0,0,0.150962843566674,0.0771741581079447,0,0.470317296361523,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0,0.257831551894309,0,0,0,0,0,0,0.143339583151451,0,0.611923411718232,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0.0918948995348449,0.250707539292375,8.10832070935162,2.94760543171796,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0.496597714366863,0.112131862580613,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p6@FKBP4 | |||
}} |
Revision as of 11:30, 11 January 2014
Short description: | p6@FKBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FKBP4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_AB385011, CU674888, DQ893668, DQ895800_5end |
EntrezGene: | FKBP4 |
HGNC: | 3720 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 3.79e-11 | 4 |
vertebrate lens cell | 3.79e-11 | 4 |
lens epithelial cell | 3.79e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 8.12e-21 | 8 |
male reproductive organ | 1.88e-15 | 11 |
cuboidal epithelium | 3.79e-11 | 4 |
transparent eye structure | 3.79e-11 | 4 |
simple cuboidal epithelium | 3.79e-11 | 4 |
cranial placode | 3.79e-11 | 4 |
lens of camera-type eye | 3.79e-11 | 4 |
epithelium of lens | 3.79e-11 | 4 |
lens placode | 3.79e-11 | 4 |
lens vesicle | 3.79e-11 | 4 |
gonad | 1.37e-08 | 21 |
indifferent external genitalia | 1.37e-08 | 21 |
indifferent gonad | 1.37e-08 | 21 |
gonad primordium | 1.37e-08 | 21 |
external genitalia | 3.04e-08 | 22 |
male organism | 3.04e-08 | 22 |
male reproductive system | 3.04e-08 | 22 |