FFCP PHASE1:Hg19::chr11:121963581..121963597,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-21bp_to_AB075498_5end | |||
|description=CAGE_peak_1_at_AB075498_5end | |||
|id=chr11:121963581..121963597,- | |||
|ontology_enrichment_celltype=CL:0000057!9.72e-25!75;CL:0000055!3.09e-18!180;CL:0002620!7.50e-13!23 | |||
|ontology_enrichment_celltype_v019=CL:0000499;3.61e-10;28!CL:0002620;5.45e-09;23!CL:0000135;3.01e-08;3!CL:0000388;3.01e-08;3!CL:0002556;9.78e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.96e-19,76;CL:0000499,2.28e-10,28;CL:0002620,7.13e-09,23;CL:0000135,3.83e-08,3;CL:0000388,3.83e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.99e-08;5!DOID:450;1.99e-08;5!DOID:66;1.99e-08;5!DOID:423;1.99e-08;5!DOID:0080000;1.99e-08;5!DOID:11722;1.99e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.09e-08,5;DOID:450,1.09e-08,5;DOID:66,1.09e-08,5;DOID:423,1.09e-08,5;DOID:0080000,1.09e-08,5;DOID:11722,1.09e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.22e-09!365;UBERON:0003102!1.88e-09!95;UBERON:0002020!3.72e-09!34;UBERON:0003528!3.72e-09!34;UBERON:0001893!1.17e-08!34;UBERON:0000073!1.35e-08!94;UBERON:0001016!1.35e-08!94;UBERON:0002791!1.98e-08!33;UBERON:0002616!2.44e-08!59;UBERON:0001049!2.90e-08!57;UBERON:0005068!2.90e-08!57;UBERON:0006241!2.90e-08!57;UBERON:0007135!2.90e-08!57;UBERON:0002780!3.40e-08!41;UBERON:0001890!3.40e-08!41;UBERON:0006240!3.40e-08!41;UBERON:0001869!4.27e-08!32;UBERON:0002199!4.31e-08!45;UBERON:0002416!4.31e-08!45;UBERON:0001017!7.81e-08!82;UBERON:0003080!8.39e-08!42;UBERON:0002097!1.27e-07!40;UBERON:0005743!2.54e-07!86;UBERON:0000955!3.11e-07!69;UBERON:0006238!3.11e-07!69;UBERON:0000033!3.45e-07!123;UBERON:0000153!3.88e-07!129;UBERON:0007811!3.88e-07!129;UBERON:0000924!4.61e-07!173;UBERON:0006601!4.61e-07!173;UBERON:0004121!6.59e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.01e-08;3!UBERON:0000043;3.01e-08;3!UBERON:0007845;3.01e-08;3!UBERON:0001758;9.78e-07;6!UBERON:0003672;9.78e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.57e-09,99;UBERON:0004797,2.44e-08,7;UBERON:0007846,3.83e-08,3;UBERON:0000043,3.83e-08,3;UBERON:0007845,3.83e-08,3 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.281908808191942,1.0007329835313,1.78784437770915,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0.85870796139317,0.958120975510189,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,0,2.462390822334,0,1.45990461090791,0.756278537312543,0.665188192387692,1.22968699970376,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,1.45650098894541,2.0078563452417,1.06400514659507,0,0,0.24666754841716,0.622422070799533,0.538842688278752,0.163461903113459,0,0.576175924479999,0.70296429550139,0.936480230490962,0,1.34503812496621,0.587172493218824,0.485618833104395,0.421352420106746,0.408308342509787,1.96534907698829,0.723280468230358,1.18800285728205,2.96720315134268,0,0,2.18836948140286,1.00094815897571,0.277064115484183,0.438977620880838,1.83892677479412,1.05166641234618,0,1.4351170855109,2.34913127700424,1.90738711043606,2.40072876867522,0.721367704669072,1.28820270022815,1.11670113798954,3.03797398034279,0.584622030967192,3.02920529092937,0.920498986422993,0.969876340912871,1.06502877754984,0.403008392910561,0.508681776931463,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0.928735856063958,0,0.236613600079688,0.168584690078102,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0.370353780634118,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.258543431515556,0,0,1.59562869950922,0,0,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,0.602878754119172,0,0.699810938274399,0,0,0,0.718874566474748,0,0,1.30303176000821,2.05476322550383,0.537182889719687,0,0,0,0,0.254094624222463,0,1.54657762555539,0.335032530668698,2.55175500661265,0,0,0,0.12269149171914,1.00034104211935,0,0.831883446123229,1.42743191037729,2.99634588564476,0.585707074963566,0,0,0,0,0,1.99832313276591,0,0,0,0,0,0,0,0,0.744323423456331,2.455391572609,1.68396056659844,0.384417447767103,1.02341449813341,0.482561763430822,0,1.23367755042124,0.355123450626254,0.410635780069046,0,0.348631135379878,0,0.200506470303285,0.184161977871793,0.574072240823034,1.45672934405374,1.70461739447251,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.193341436584244,0.462145851343933,0.460511024178389,0.275673144969061,1.6113036730241,1.30515024522806,0.681813019328807,0.356128142586949,0.165284915360978,0,1.02090169995667,0,0,1.5740617341532,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.539617372749944,0.823611089208164,0.353437207037059,0,0,0,0,1.46228093778771,0,0.272999822815972,1.27264888758341,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0.354761064070598,1.26664581178598,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.333926115068718,0,1.26675244876796,0.19924798825107,0,0,0,0,1.86623752597084,0.269605053441981,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0.110579259931225,0,0,0,0,0.384751292518985,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,1.20990716048664,0.61214552326098,0.379119477770928,0,0,0,0,0.313932918407225,0,0,0.416024019039416,0,0,0,0,1.37588825977293,0,0.219267951258557,0.0821154570532092,0,0.794305140223502,0,0.411125773940253,0.596143835108969,0.316553979779393,0,0,0.426905989478705,0,0,0,0,0.720273989940749,0.49701014226173,0,0,0.209205692624666,0.101998217636322,0.288950589901519,0.600420288709789,0.684526894459965,0,0,0,1.67569440763353,1.14580212005842,0,0,0,0,0.0671834724867263,3.24269895188163,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.242998226632099,0,0,0,0.422401346077626,0,0,0,0,0,0,0.864221491201268,1.63293680054705,0,0,1.5334921960688,0.566560457600628,0,0,0.387848869084652,1.05786081394152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.625954653532499,0.573409195690071,0,0.0620964029413835,0,0,0,0,0.941063278792687,0,0,0.298509605773748,0.233713309847224,0,0.757612021100357,2.0125432140206,0,0,0.302461847526478,0.310874401165561,0.443565449968902,0.63718706865481,0.449803112163605,0.310525913752519,3.31764966272684,1.86089200190596,0,0.601030435988874,0.380805212168795,0,0.181848659202559,0.214821114084977,0.928067519756987,1.59238355479446,1.20008329398946,0.343395705182793,1.6837474438296,0,0,0,0,0,1.85217979459067,0,0.179088841081487,0,0.219284049578707,0.706756583783524,0.38582807654183,0.337884881306145,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0.737318726261158,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0.539124056983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| |||
|short_description=p1@AB075498 | |||
}} |
Revision as of 10:52, 11 January 2014
Short description: | p1@AB075498 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB075498_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_AB075498_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.96e-19 | 76 |
stromal cell | 2.28e-10 | 28 |
skin fibroblast | 7.13e-09 | 23 |
fibrocyte | 3.83e-08 | 3 |
tendon cell | 3.83e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
surface structure | 8.57e-09 | 99 |
blood vessel layer | 2.44e-08 | 7 |
dense regular connective tissue | 3.83e-08 | 3 |
tendon | 3.83e-08 | 3 |
regular connective tissue | 3.83e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.09e-08 | 5 |
myotonic disease | 1.09e-08 | 5 |
muscle tissue disease | 1.09e-08 | 5 |
myopathy | 1.09e-08 | 5 |
muscular disease | 1.09e-08 | 5 |
myotonic dystrophy | 1.09e-08 | 5 |