FFCP PHASE1:Hg19::chr11:120256098..120256105,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23365 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14193 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=68bp_to_ENST00000529970_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_13_at_ARHGEF12_5end | |||
|id=chr11:120256098..120256105,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.82e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.03e-75!82;UBERON:0005743!3.44e-74!86;UBERON:0001049!1.01e-66!57;UBERON:0005068!1.01e-66!57;UBERON:0006241!1.01e-66!57;UBERON:0007135!1.01e-66!57;UBERON:0000073!4.49e-66!94;UBERON:0001016!4.49e-66!94;UBERON:0000955!8.97e-63!69;UBERON:0006238!8.97e-63!69;UBERON:0002616!6.01e-61!59;UBERON:0002020!5.73e-60!34;UBERON:0003528!5.73e-60!34;UBERON:0001893!6.01e-60!34;UBERON:0002619!3.01e-59!22;UBERON:0002791!2.72e-57!33;UBERON:0002780!7.24e-56!41;UBERON:0001890!7.24e-56!41;UBERON:0006240!7.24e-56!41;UBERON:0001869!2.03e-55!32;UBERON:0003080!2.31e-54!42;UBERON:0001950!5.08e-54!20;UBERON:0000956!1.19e-51!25;UBERON:0000203!1.19e-51!25;UBERON:0003075!1.65e-50!86;UBERON:0007284!1.65e-50!86;UBERON:0002346!8.94e-48!90;UBERON:0000033!1.16e-39!123;UBERON:0004121!9.66e-38!169;UBERON:0003056!1.85e-37!61;UBERON:0000153!2.82e-37!129;UBERON:0007811!2.82e-37!129;UBERON:0000924!1.43e-36!173;UBERON:0006601!1.43e-36!173;UBERON:0007023!3.47e-35!115;UBERON:0000200!1.61e-18!6;UBERON:0001871!9.68e-18!7;UBERON:0001872!1.04e-15!5;UBERON:0002021!2.65e-15!5;UBERON:0000025!3.31e-15!194;UBERON:0000349!1.29e-14!5;UBERON:0003076!2.60e-13!15;UBERON:0003057!2.60e-13!15;UBERON:0004111!1.59e-12!241;UBERON:0000475!8.96e-12!365;UBERON:0000483!2.29e-11!309;UBERON:0000119!3.85e-11!312;UBERON:0000477!5.07e-11!286;UBERON:0002420!1.02e-10!9;UBERON:0007245!1.02e-10!9;UBERON:0010009!1.02e-10!9;UBERON:0010011!1.02e-10!9;UBERON:0000454!1.02e-10!9;UBERON:0002308!1.77e-10!9;UBERON:0000125!1.77e-10!9;UBERON:0002771!4.06e-10!3;UBERON:0000064!3.52e-09!219;UBERON:0000988!3.77e-09!3;UBERON:0002240!7.77e-09!3;UBERON:0006331!7.77e-09!3;UBERON:0002298!1.39e-08!8;UBERON:0000481!3.51e-08!347;UBERON:0004733!9.20e-08!12;UBERON:0002028!9.20e-08!12;UBERON:0007277!9.20e-08!12;UBERON:0002680!1.66e-07!9;UBERON:0001895!1.66e-07!9;UBERON:0010092!1.66e-07!9;UBERON:0001870!1.76e-07!2;UBERON:0000923!2.65e-07!604;UBERON:0005291!2.65e-07!604;UBERON:0006598!2.65e-07!604;UBERON:0002532!2.65e-07!604;UBERON:0002050!2.89e-07!605;UBERON:0005423!2.89e-07!605;UBERON:0004732!4.12e-07!13;UBERON:0000922!5.26e-07!612;UBERON:0001876!7.58e-07!2;UBERON:0001954!8.76e-07!2;UBERON:0003022!8.76e-07!2;UBERON:0002421!8.76e-07!2;UBERON:0002600!8.76e-07!2;UBERON:0000369!8.78e-07!4;UBERON:0002435!8.78e-07!4;UBERON:0000204!8.78e-07!4;UBERON:0010082!8.78e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.52e-107;20!UBERON:0002619;1.76e-97;22!UBERON:0000956;7.32e-86;25!UBERON:0000203;7.32e-86;25!UBERON:0001869;3.26e-72;32!UBERON:0001893;1.88e-67;34!UBERON:0002791;3.10e-64;32!UBERON:0003528;5.95e-62;34!UBERON:0002020;5.95e-62;34!UBERON:0000200;5.57e-43;6!UBERON:0002780;2.60e-41;41!UBERON:0001890;2.60e-41;41!UBERON:0001872;3.83e-36;5!UBERON:0002021;2.99e-35;5!UBERON:0000073;1.61e-30;53!UBERON:0002616;1.61e-30;53!UBERON:0001017;5.88e-28;75!UBERON:0000955;1.18e-25;68!UBERON:0001870;8.73e-23;3!UBERON:0001016;2.52e-20;83!UBERON:0001871;1.94e-16;6!UBERON:0002702;6.93e-16;2!UBERON:0002771;1.87e-15;2!UBERON:0011216;4.79e-09;132!UBERON:0002022;7.27e-09;1!UBERON:0002581;1.18e-08;1!UBERON:0002902;2.64e-08;1!UBERON:0001882;2.64e-08;1!UBERON:0009899;2.64e-08;1!UBERON:0007190;2.64e-08;1!UBERON:0005403;2.64e-08;1!UBERON:0007023;3.77e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.72e-107,20;UBERON:0002619,1.82e-97,22;UBERON:0000956,7.57e-86,25;UBERON:0000203,7.57e-86,25;UBERON:0001869,9.11e-83,32;UBERON:0001893,7.79e-78,34;UBERON:0002791,1.32e-74,32;UBERON:0003528,3.80e-70,34;UBERON:0002020,3.80e-70,34;UBERON:0002780,2.87e-64,41;UBERON:0001890,2.87e-64,41;UBERON:0003080,2.87e-64,41;UBERON:0006240,2.87e-64,41;UBERON:0000955,1.33e-59,68;UBERON:0006238,1.33e-59,68;UBERON:0001017,2.06e-58,81;UBERON:0000073,2.27e-54,53;UBERON:0002616,2.27e-54,53;UBERON:0001016,2.74e-52,89;UBERON:0001049,2.60e-51,56;UBERON:0005068,2.60e-51,56;UBERON:0006241,2.60e-51,56;UBERON:0007135,2.60e-51,56;UBERON:0000200,5.39e-43,6;UBERON:0003056,2.29e-42,61;UBERON:0001872,4.29e-36,5;UBERON:0002021,4.30e-35,5;UBERON:0003075,4.76e-34,82;UBERON:0007284,4.76e-34,82;UBERON:0002346,2.63e-32,86;UBERON:0010371,4.16e-26,104;UBERON:0004121,1.26e-25,171;UBERON:0000924,1.26e-25,171;UBERON:0006601,1.26e-25,171;UBERON:0007023,9.82e-24,114;UBERON:0001870,9.42e-23,3;UBERON:0011216,2.26e-20,223;UBERON:0010314,8.62e-20,132;UBERON:0001871,1.49e-16,6;UBERON:0002702,9.32e-16,2;UBERON:0002771,1.25e-15,2;UBERON:0000025,2.07e-12,192;UBERON:0004111,3.80e-09,240;UBERON:0002022,7.01e-09,1;UBERON:0002581,1.37e-08,1;UBERON:0002902,2.13e-08,1;UBERON:0009899,2.13e-08,1;UBERON:0007190,2.46e-08,1;UBERON:0001882,3.28e-08,1;UBERON:0005403,3.28e-08,1;UBERON:0000483,3.55e-07,306;UBERON:0000119,4.57e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,1.58189712359363,0.762520775695299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,2.87581104301739,5.98841394003583,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.221158519862449,0.295547618953547,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84898581801454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.953423842781029,0,0,0,0,0,3.58422384282346,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,3.90484047686282,2.003054891304,0,0,0.496771223531068,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.345430341731199,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47727217721857,1.41696576325585,2.07524016774297,2.46139637088906,1.51243017733031,1.72893131160545,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62090203084147,3.12431239445539,1.65349437200947,2.21955335678674,2.18789923607288,0,0,0,0,0,0,0,0,0,0,0,1.56330385846713,2.17050152757402,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,0.286679166302903,0,1.15585533324555,3.05445483238264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@ARHGEF12 | |||
}} |
Revision as of 10:49, 11 January 2014
Short description: | p13@ARHGEF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ARHGEF12_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 68bp_to_ENST00000529970_5end |
EntrezGene: | ARHGEF12 |
HGNC: | 14193 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data