FFCP PHASE1:Hg19::chr11:118478294..118478310,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23187 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23697 | |||
|TSSclassifier=strong | |||
|UniProt=B0YJ65,Q86UU1 | |||
|association_with_transcript=0bp_to_ENST00000358191,ENST00000361465,NM_001144758,NM_001144759,uc001pts.2,uc001ptt.2,uc010ryh.1_5end | |||
|description=CAGE_peak_3_at_PHLDB1_5end | |||
|id=chr11:118478294..118478310,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.82e-25!180;CL:0000057!1.10e-15!75;CL:0000183!2.77e-15!59;CL:0000680!7.44e-14!57;CL:0000056!7.44e-14!57;CL:0000355!7.44e-14!57;CL:0000187!1.48e-13!54;CL:0000393!2.05e-10!60;CL:0000211!2.05e-10!60;CL:0000222!7.25e-10!119;CL:0000192!2.13e-09!42;CL:0000514!2.13e-09!42;CL:0002620!4.85e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000187;5.58e-09;55!CL:0002620;3.74e-08;23!CL:0000192;5.02e-08;43!CL:0000393;6.53e-07;61!CL:0000211;6.53e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.58e-16,76;CL:0000680,3.22e-15,58;CL:0000056,3.22e-15,58;CL:0000355,3.22e-15,58;CL:0000187,6.66e-15,55;CL:0000393,8.81e-12,61;CL:0000211,8.81e-12,61;CL:0000192,1.93e-10,43;CL:0000514,1.93e-10,43;CL:0000222,1.03e-09,121;CL:0002620,1.84e-08,23;CL:0000359,7.45e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000355;1.64e-08;58!CL:0000514;5.02e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.40e-18!365;UBERON:0000914!5.09e-18!83;UBERON:0002329!5.09e-18!83;UBERON:0003077!5.09e-18!83;UBERON:0003059!5.09e-18!83;UBERON:0007282!5.09e-18!83;UBERON:0009618!5.09e-18!83;UBERON:0007285!5.09e-18!83;UBERON:0004290!5.00e-16!70;UBERON:0000468!6.22e-16!659;UBERON:0000119!6.87e-15!312;UBERON:0000483!1.52e-14!309;UBERON:0002385!2.09e-14!63;UBERON:0001015!2.09e-14!63;UBERON:0000383!2.09e-14!63;UBERON:0001134!3.51e-14!61;UBERON:0002036!3.51e-14!61;UBERON:0003082!3.51e-14!61;UBERON:0000481!1.54e-13!347;UBERON:0000467!2.95e-13!625;UBERON:0000480!5.76e-13!626;UBERON:0000477!5.78e-13!286;UBERON:0000486!5.86e-13!82;UBERON:0000025!6.03e-13!194;UBERON:0005256!4.57e-12!143;UBERON:0002050!6.65e-12!605;UBERON:0005423!6.65e-12!605;UBERON:0002616!1.27e-11!59;UBERON:0000923!1.59e-11!604;UBERON:0005291!1.59e-11!604;UBERON:0006598!1.59e-11!604;UBERON:0002532!1.59e-11!604;UBERON:0000922!3.55e-11!612;UBERON:0004111!4.49e-11!241;UBERON:0001049!5.53e-11!57;UBERON:0005068!5.53e-11!57;UBERON:0006241!5.53e-11!57;UBERON:0007135!5.53e-11!57;UBERON:0002346!1.00e-10!90;UBERON:0000955!1.23e-10!69;UBERON:0006238!1.23e-10!69;UBERON:0003075!2.60e-10!86;UBERON:0007284!2.60e-10!86;UBERON:0000479!7.71e-10!787;UBERON:0004872!8.93e-10!84;UBERON:0002049!7.66e-09!79;UBERON:0007798!7.66e-09!79;UBERON:0000033!9.14e-09!123;UBERON:0001017!1.13e-08!82;UBERON:0005743!1.61e-08!86;UBERON:0007023!4.10e-08!115;UBERON:0000073!8.07e-08!94;UBERON:0001016!8.07e-08!94;UBERON:0001981!8.35e-08!60;UBERON:0007500!8.35e-08!60;UBERON:0004537!8.35e-08!60;UBERON:0006965!8.35e-08!60;UBERON:0000153!9.13e-08!129;UBERON:0007811!9.13e-08!129;UBERON:0003914!9.41e-08!118;UBERON:0003080!1.24e-07!42;UBERON:0000062!1.30e-07!511;UBERON:0002780!3.31e-07!41;UBERON:0001890!3.31e-07!41;UBERON:0006240!3.31e-07!41;UBERON:0001637!4.27e-07!42;UBERON:0003509!4.27e-07!42;UBERON:0004572!4.27e-07!42;UBERON:0000055!4.70e-07!69;UBERON:0002100!5.24e-07!216;UBERON:0004535!5.77e-07!110;UBERON:0001009!5.84e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.17e-07;31!UBERON:0001015;1.17e-07;31!UBERON:0000383;1.17e-07;31!UBERON:0002204;5.69e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.39e-18,73;UBERON:0003077,1.29e-17,72;UBERON:0007285,1.29e-17,72;UBERON:0002329,3.31e-17,71;UBERON:0003059,3.31e-17,71;UBERON:0007282,3.31e-17,71;UBERON:0004290,3.31e-17,71;UBERON:0009618,3.31e-17,71;UBERON:0007503,3.55e-17,78;UBERON:0010314,9.18e-16,132;UBERON:0002385,1.78e-15,64;UBERON:0001015,1.78e-15,64;UBERON:0000383,1.78e-15,64;UBERON:0001134,3.10e-15,62;UBERON:0002036,3.10e-15,62;UBERON:0003082,3.10e-15,62;UBERON:0000119,8.80e-14,309;UBERON:0000483,1.94e-13,306;UBERON:0000486,5.42e-13,83;UBERON:0000025,4.79e-12,192;UBERON:0003104,1.58e-11,160;UBERON:0009142,1.58e-11,160;UBERON:0002346,5.87e-11,86;UBERON:0001049,6.92e-11,56;UBERON:0005068,6.92e-11,56;UBERON:0006241,6.92e-11,56;UBERON:0007135,6.92e-11,56;UBERON:0003075,1.61e-10,82;UBERON:0007284,1.61e-10,82;UBERON:0000955,2.26e-10,68;UBERON:0006238,2.26e-10,68;UBERON:0000073,2.93e-10,53;UBERON:0002616,2.93e-10,53;UBERON:0004872,7.87e-10,83;UBERON:0005256,9.12e-10,122;UBERON:0004111,1.15e-09,240;UBERON:0000479,2.02e-09,773;UBERON:0001017,1.00e-08,81;UBERON:0002049,1.99e-08,78;UBERON:0007798,1.99e-08,78;UBERON:0007023,4.64e-08,114;UBERON:0000926,7.00e-08,315;UBERON:0004120,7.00e-08,315;UBERON:0006603,7.00e-08,315;UBERON:0001016,1.08e-07,89;UBERON:0007500,1.31e-07,59;UBERON:0001981,1.31e-07,59;UBERON:0004537,1.31e-07,59;UBERON:0006965,1.31e-07,59;UBERON:0000923,1.71e-07,560;UBERON:0010316,1.71e-07,560;UBERON:0005291,1.71e-07,560;UBERON:0006598,1.71e-07,560;UBERON:0010317,1.71e-07,560;UBERON:0002532,1.71e-07,560;UBERON:0002050,2.04e-07,564;UBERON:0002780,2.30e-07,41;UBERON:0001890,2.30e-07,41;UBERON:0003080,2.30e-07,41;UBERON:0006240,2.30e-07,41;UBERON:0002204,3.18e-07,167;UBERON:0003914,3.69e-07,117;UBERON:0001637,3.91e-07,42;UBERON:0003509,3.91e-07,42;UBERON:0004572,3.91e-07,42;UBERON:0005423,4.38e-07,581;UBERON:0010371,4.88e-07,104;UBERON:0003528,7.97e-07,34;UBERON:0002020,7.97e-07,34;UBERON:0004535,8.04e-07,109;UBERON:0001009,8.05e-07,112;UBERON:0000922,8.65e-07,592 | |||
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| |||
|short_description=p3@PHLDB1 | |||
}} |
Revision as of 10:39, 11 January 2014
Short description: | p3@PHLDB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PHLDB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000358191, ENST00000361465, NM_001144758, NM_001144759, uc001pts.2, uc001ptt.2, uc010ryh.1_5end |
EntrezGene: | PHLDB1 |
HGNC: | 23697 |
UniProt: | B0YJ65Q86UU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.58e-16 | 76 |
muscle precursor cell | 3.22e-15 | 58 |
myoblast | 3.22e-15 | 58 |
multi-potent skeletal muscle stem cell | 3.22e-15 | 58 |
muscle cell | 6.66e-15 | 55 |
electrically responsive cell | 8.81e-12 | 61 |
electrically active cell | 8.81e-12 | 61 |
smooth muscle cell | 1.93e-10 | 43 |
smooth muscle myoblast | 1.93e-10 | 43 |
mesodermal cell | 1.03e-09 | 121 |
skin fibroblast | 1.84e-08 | 23 |
vascular associated smooth muscle cell | 7.45e-07 | 32 |