FFCP PHASE1:Hg19::chr11:115630869..115630881,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=22bp_to_ENST00000537070_5end | |||
|description=CAGE_peak_1_at_ENST00000537070_5end | |||
|id=chr11:115630869..115630881,- | |||
|ontology_enrichment_celltype=CL:0000839!7.09e-17!70;CL:0000557!1.88e-16!71;CL:0000766!2.37e-15!76;CL:0002057!2.02e-14!42;CL:0002194!4.87e-14!63;CL:0000576!4.87e-14!63;CL:0000040!4.87e-14!63;CL:0000559!4.87e-14!63;CL:0002009!2.91e-13!65;CL:0000860!7.50e-13!45;CL:0000763!3.17e-07!112;CL:0000049!3.17e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-24;33!CL:0002057;1.15e-24;33!CL:0000576;1.89e-19;48!CL:0000473;1.68e-18;39!CL:0000234;1.68e-18;39!CL:0000766;7.61e-14;69!CL:0002619;5.14e-11;3!CL:0000097;6.07e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.57e-25,66;CL:0000557,4.12e-25,67;CL:0000766,3.47e-23,72;CL:0002194,1.06e-21,59;CL:0000576,1.06e-21,59;CL:0000040,1.06e-21,59;CL:0000559,1.06e-21,59;CL:0002009,6.46e-21,61;CL:0000473,3.60e-20,48;CL:0000234,3.60e-20,48;CL:0000860,1.87e-19,42;CL:0002057,1.87e-19,42;CL:0000763,1.51e-16,108;CL:0000049,1.51e-16,108;CL:0002031,8.63e-13,120;CL:0002619,5.69e-11,3;CL:0000738,6.07e-11,136;CL:0002032,4.42e-10,161;CL:0000837,4.42e-10,161;CL:0002087,5.70e-10,115;CL:0000037,1.57e-09,168;CL:0000988,6.92e-09,177;CL:0000097,4.25e-07,5;CL:0002028,4.25e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.07e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.84e-17!115;UBERON:0002371!3.21e-15!80;UBERON:0001049!4.27e-15!57;UBERON:0005068!4.27e-15!57;UBERON:0006241!4.27e-15!57;UBERON:0007135!4.27e-15!57;UBERON:0001474!3.24e-14!86;UBERON:0004765!2.37e-13!101;UBERON:0001434!2.37e-13!101;UBERON:0002616!4.04e-13!59;UBERON:0003075!7.07e-12!86;UBERON:0007284!7.07e-12!86;UBERON:0002780!7.14e-12!41;UBERON:0001890!7.14e-12!41;UBERON:0006240!7.14e-12!41;UBERON:0000062!1.27e-11!511;UBERON:0003080!2.09e-11!42;UBERON:0000955!2.55e-11!69;UBERON:0006238!2.55e-11!69;UBERON:0002346!8.34e-11!90;UBERON:0002020!1.42e-10!34;UBERON:0003528!1.42e-10!34;UBERON:0002390!2.05e-10!102;UBERON:0003061!2.05e-10!102;UBERON:0002791!4.76e-10!33;UBERON:0001017!6.02e-10!82;UBERON:0005743!1.01e-09!86;UBERON:0001893!1.41e-09!34;UBERON:0002405!1.56e-09!115;UBERON:0001869!1.69e-09!32;UBERON:0000153!4.02e-09!129;UBERON:0007811!4.02e-09!129;UBERON:0003056!4.49e-09!61;UBERON:0000033!5.24e-09!123;UBERON:0002193!6.87e-09!112;UBERON:0000073!2.58e-08!94;UBERON:0001016!2.58e-08!94;UBERON:0004121!1.39e-07!169;UBERON:0000924!4.41e-07!173;UBERON:0006601!4.41e-07!173;UBERON:0000956!5.02e-07!25;UBERON:0000203!5.02e-07!25 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.95e-22,76;UBERON:0001474,4.97e-20,82;UBERON:0001434,3.20e-18,100;UBERON:0004765,5.27e-18,90;UBERON:0002405,2.47e-17,93;UBERON:0002390,2.64e-16,98;UBERON:0003061,2.64e-16,98;UBERON:0002193,1.57e-14,108;UBERON:0002204,4.99e-11,167;UBERON:0003081,2.32e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0.263766978228454,0,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0.286235987131057,0.273748850145768,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,2.01523926815932,0.32389366601898,1.28787783817093,2.18097358169347,1.51150377475524,0.727752183563449,3.25400651667958,1.6446715520873,1.85823822537062,1.1507695692886,0,0,0.344745680736619,0,0,1.88242339542605,1.09162460023138,0.898893937780338,2.44867113896722,0.641858054152187,0.639337125799041,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,1.00499466102697,0,0.434377689410233,1.21079900526674,0,0.316462387440884,0.422510572623884,0,0,0.112328631146495,0.300353785683013,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.283604451492204,0.221729397462564,0,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323745888736263,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0.877955241761676,0,0.300476117813194,0,0,0,0.211931901159562,0,0.103052529238439,0.515281080091258,0.18611685633159,0,0,0,0,0.161646056818812,0.355009592516614,0,0,0.386521706326594,0,0.573609190778008,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,1.1240175325762,0.402115889646523,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0.984868024349589,0.468008530278475,0.445893486866185,0,0,0,0,0,0,1.97065295158377,2.72950145441001,0.621984346622316,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,2.51128545716063,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0.788512075169673,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,2.30506425071931,0,0,0.0962221127255121,0,0,0.0941438007767792,0.86101074534246,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0.614321404198464,0,0.140669416410513,0,0,2.11125408127993,0,0,0,0,0,0.311039587661807,0,0,1.02314474045374,0.197286811273867,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0.520874984799877,1.77148277162768,0.361789315876224,0,0.552896299656123,0.591095237907095,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.789168805698781,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.226624183040251,0.146552233678082,0,0.129282956361551,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0.488105059607853,0.250381861413,0,0.110929051536852,0.124192805882767,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0.516644938982447,0,0,0.279759015438889,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0.385375350578757,0,0.159633859057151,0.205116364240755,0.252071696221718,0.138314504928436,0,0,0,0,0,0,0,0.690359926060101,0,0.0752103283492573,0,0,0,0.327543835020193,0,0,0,0.413373593002368,0.317079050969534,0,0,0.496211178389294,0,0,0.535701835878287,0.336283722218824,0,0.682986574053893,0.0887023701626388,0,0,0.0679697329768317,0.131545547125698,0,0,0.156986185701028,0.471346769748006,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0.245148321753905,0,0.392616934229891,0,0,0.169927114687817,0.375935671919414,0.0644578879735772,0,0,0,0,0,0,0,0,0.271965960763659,0,1.0580536810308,0.371995018166751,0,0,0,0.109265571963696,0,0,0,0,0,0.454672189309436,0.535928260312357,0,0.103432995861895,0.213233981900981,0.476128862927481,0,0,0,0.0636471582781649,0.202117188958219,0.217716747896961,0.342233301085281,0.134704106029175,0.143444410785353,0,0,0,1.9307228228694,0,0,0.244482888365733,0.406896178315738,0,0,0 | |||
|short_description=p1@ENST00000537070 | |||
}} |
Revision as of 10:27, 11 January 2014
Short description: | p1@ENST00000537070 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000537070_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000537070_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.57e-25 | 66 |
granulocyte monocyte progenitor cell | 4.12e-25 | 67 |
myeloid leukocyte | 3.47e-23 | 72 |
monopoietic cell | 1.06e-21 | 59 |
monocyte | 1.06e-21 | 59 |
monoblast | 1.06e-21 | 59 |
promonocyte | 1.06e-21 | 59 |
macrophage dendritic cell progenitor | 6.46e-21 | 61 |
defensive cell | 3.60e-20 | 48 |
phagocyte | 3.60e-20 | 48 |
classical monocyte | 1.87e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.87e-19 | 42 |
myeloid cell | 1.51e-16 | 108 |
common myeloid progenitor | 1.51e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 8.63e-13 | 120 |
adult endothelial progenitor cell | 5.69e-11 | 3 |
leukocyte | 6.07e-11 | 136 |
hematopoietic oligopotent progenitor cell | 4.42e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.42e-10 | 161 |
nongranular leukocyte | 5.70e-10 | 115 |
hematopoietic stem cell | 1.57e-09 | 168 |
hematopoietic cell | 6.92e-09 | 177 |
mast cell | 4.25e-07 | 5 |
basophil mast progenitor cell | 4.25e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.95e-22 | 76 |
bone element | 4.97e-20 | 82 |
skeletal system | 3.20e-18 | 100 |
skeletal element | 5.27e-18 | 90 |
immune system | 2.47e-17 | 93 |
hematopoietic system | 2.64e-16 | 98 |
blood island | 2.64e-16 | 98 |
hemolymphoid system | 1.57e-14 | 108 |
musculoskeletal system | 4.99e-11 | 167 |
lateral plate mesoderm | 2.32e-07 | 203 |