FFCP PHASE1:Hg19::chr11:93754560..93754567,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_at_chr11:93754560..93754567,+ | |||
|id=chr11:93754560..93754567,+ | |||
|ontology_enrichment_celltype=CL:0002621!6.74e-29!3;CL:0002166!2.26e-28!3;CL:0002159!4.51e-25!13;CL:0000362!6.50e-11!8;CL:1001319!4.75e-10!1;CL:1000600!4.75e-10!1;CL:0002076!9.68e-10!43;CL:0002077!1.26e-09!33;CL:0000312!2.54e-08!5;CL:0000622!3.78e-08!5;CL:0002251!2.73e-07!21;CL:0000240!4.52e-07!6;CL:0000311!4.52e-07!6;CL:0000079!4.52e-07!6;CL:0000237!4.52e-07!6;CL:0000036!4.52e-07!6;CL:0000357!4.52e-07!6;CL:0000114!4.52e-07!6;CL:0000154!6.29e-07!6;CL:0000223!6.80e-07!59;CL:0002368!8.36e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002621;8.32e-85;3!CL:0002251;1.73e-13;20!CL:0002076;2.10e-12;42!CL:0002166;1.04e-10;3!CL:0002159;4.95e-09;14!CL:0000312;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,5.41e-85,3;CL:0002251,1.62e-13,20;CL:0002076,2.67e-11,42;CL:0002166,9.90e-11,3;CL:0002159,5.15e-09,14;CL:0000223,2.62e-08,58;CL:0000312,6.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.15e-15;2!UBERON:0010056;1.15e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!6.74e-29!3;UBERON:0001708!1.89e-21!4;UBERON:0001704!1.89e-21!4;UBERON:0000166!6.90e-21!21;UBERON:0000161!8.41e-16!35;UBERON:0000165!1.71e-15!28;UBERON:0000930!1.71e-15!28;UBERON:0002090!1.66e-14!6;UBERON:0001723!2.05e-13!3;UBERON:0001033!2.05e-13!3;UBERON:0010056!2.05e-13!3;UBERON:0001004!3.02e-11!72;UBERON:0001828!3.29e-11!8;UBERON:0002372!2.08e-10!1;UBERON:0001961!2.08e-10!1;UBERON:0001744!2.08e-10!1;UBERON:0001735!2.08e-10!1;UBERON:0004645!4.75e-10!1;UBERON:0001256!4.75e-10!1;UBERON:0001259!4.75e-10!1;UBERON:0003102!6.04e-10!95;UBERON:0001042!7.04e-09!10;UBERON:0009145!7.04e-09!10;UBERON:0001444!9.96e-09!48;UBERON:0000078!2.38e-08!18;UBERON:0003129!3.80e-08!11;UBERON:0006562!4.09e-08!11;UBERON:0000365!5.22e-08!5;UBERON:0000075!5.80e-07!13;UBERON:0005944!5.80e-07!13;UBERON:0004288!5.80e-07!13;UBERON:0003089!5.80e-07!13;UBERON:0004119!6.91e-07!169;UBERON:0000925!6.91e-07!169;UBERON:0006595!6.91e-07!169;UBERON:0000002!7.75e-07!6;UBERON:0001560!7.75e-07!6;UBERON:0005910!8.22e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;8.32e-85;3!UBERON:0003929;5.92e-37;7!UBERON:0003350;1.86e-32;8!UBERON:0001828;1.86e-32;8!UBERON:0000486;6.10e-22;12!UBERON:0003729;2.55e-20;13!UBERON:0000165;9.64e-17;28!UBERON:0010371;1.37e-15;31!UBERON:0000161;3.70e-14;19!UBERON:0000166;3.70e-14;19!UBERON:0000344;1.73e-13;20!UBERON:0004807;2.49e-12;22!UBERON:0001723;6.73e-11;3!UBERON:0001033;6.73e-11;3!UBERON:0001708;2.35e-08;4!UBERON:0008895;2.35e-08;4!UBERON:0005911;2.02e-07;36!UBERON:0001555;2.38e-07;54!UBERON:0011159;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,5.41e-85,3;UBERON:0003350,1.59e-32,8;UBERON:0001828,1.59e-32,8;UBERON:0000166,3.56e-21,22;UBERON:0003729,2.31e-20,13;UBERON:0000165,3.28e-16,29;UBERON:0000930,3.28e-16,29;UBERON:0000344,1.62e-13,20;UBERON:0000161,3.64e-13,36;UBERON:0000033,4.93e-13,56;UBERON:0000153,8.32e-12,62;UBERON:0007811,8.32e-12,62;UBERON:0001723,6.73e-11,3;UBERON:0001033,6.73e-11,3;UBERON:0010056,6.73e-11,3;UBERON:0003102,1.51e-10,99;UBERON:0001004,6.19e-10,74;UBERON:0004807,7.35e-10,28;UBERON:0001444,8.37e-10,49;UBERON:0001708,2.26e-08,4;UBERON:0008895,2.26e-08,4;UBERON:0008814,2.68e-07,18;UBERON:0011159,6.04e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,4.36393792945335,2.86804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20725313949488,0,0.703702806881416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.34385702559088,0.992425680696705,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,1.27612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.660635445321,0.684466602170562,0.336760265072938,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:93754560..93754567,+ | |||
}} |
Revision as of 09:52, 11 January 2014
Short description: | p@chr11:93754560..93754567, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:93754560..93754567, + |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 5.41e-85 | 3 |
epithelial cell of alimentary canal | 1.62e-13 | 20 |
endo-epithelial cell | 2.67e-11 | 42 |
epithelial cell of Malassez | 9.90e-11 | 3 |
general ecto-epithelial cell | 5.15e-09 | 14 |
endodermal cell | 2.62e-08 | 58 |
keratinocyte | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 5.41e-85 | 3 |
epithelium of mucosa | 1.59e-32 | 8 |
gingiva | 1.59e-32 | 8 |
oral opening | 3.56e-21 | 22 |
mouth mucosa | 2.31e-20 | 13 |
mouth | 3.28e-16 | 29 |
stomodeum | 3.28e-16 | 29 |
mucosa | 1.62e-13 | 20 |
orifice | 3.64e-13 | 36 |
head | 4.93e-13 | 56 |
anterior region of body | 8.32e-12 | 62 |
craniocervical region | 8.32e-12 | 62 |
tongue | 6.73e-11 | 3 |
gustatory system | 6.73e-11 | 3 |
future tongue | 6.73e-11 | 3 |
surface structure | 1.51e-10 | 99 |
respiratory system | 6.19e-10 | 74 |
respiratory system epithelium | 7.35e-10 | 28 |
subdivision of head | 8.37e-10 | 49 |
jaw skeleton | 2.26e-08 | 4 |
splanchnocranium | 2.26e-08 | 4 |
pharyngeal arch system | 2.68e-07 | 18 |
primary subdivision of cranial skeletal system | 6.04e-07 | 5 |