FFCP PHASE1:Hg19::chr11:69458592..69458678,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=595 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1582 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=112bp_to_ENST00000545484_5end | |||
|coexpression_cluster_id=C1350 | |||
|description=CAGE_peak_4_at_CCND1_5end | |||
|id=chr11:69458592..69458678,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.62e-23!180;CL:0000220!2.34e-21!246;CL:0002321!2.35e-21!248;CL:0000359!3.57e-16!32;CL:0000192!1.93e-15!42;CL:0000514!1.93e-15!42;CL:0000222!2.31e-14!119;CL:0000680!3.96e-14!57;CL:0000056!3.96e-14!57;CL:0000355!3.96e-14!57;CL:0000187!1.19e-12!54;CL:0000183!1.17e-11!59;CL:0000393!2.51e-11!60;CL:0000211!2.51e-11!60;CL:0000057!3.05e-09!75;CL:0002539!8.25e-08!10;CL:0000066!8.58e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.98e-21;32!CL:0000192;3.15e-12;43!CL:0002539;9.55e-12;10!CL:0000187;9.94e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.86e-22,32;CL:0000192,4.01e-16,43;CL:0000514,4.01e-16,43;CL:0000680,3.38e-14,58;CL:0000056,3.38e-14,58;CL:0000355,3.38e-14,58;CL:0000187,4.06e-12,55;CL:0002539,4.15e-12,10;CL:0000393,6.00e-10,61;CL:0000211,6.00e-10,61;CL:0000222,8.38e-10,121;CL:0002321,1.22e-09,250;CL:0000057,1.38e-08,76;CL:0002334,1.68e-07,12;CL:0002595,9.30e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;3.15e-12;43!CL:0000355;3.46e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!3.04e-18!216;UBERON:0001637!2.25e-17!42;UBERON:0003509!2.25e-17!42;UBERON:0004572!2.25e-17!42;UBERON:0002049!2.86e-16!79;UBERON:0007798!2.86e-16!79;UBERON:0000055!6.24e-16!69;UBERON:0004573!1.78e-15!33;UBERON:0004571!1.78e-15!33;UBERON:0001981!1.37e-14!60;UBERON:0007500!1.37e-14!60;UBERON:0004537!1.37e-14!60;UBERON:0006965!1.37e-14!60;UBERON:0005256!1.82e-14!143;UBERON:0000475!2.46e-13!365;UBERON:0000914!4.61e-13!83;UBERON:0002329!4.61e-13!83;UBERON:0003077!4.61e-13!83;UBERON:0003059!4.61e-13!83;UBERON:0007282!4.61e-13!83;UBERON:0009618!4.61e-13!83;UBERON:0007285!4.61e-13!83;UBERON:0004290!1.13e-12!70;UBERON:0000486!1.24e-12!82;UBERON:0003914!2.76e-12!118;UBERON:0000490!2.78e-12!138;UBERON:0001134!1.30e-11!61;UBERON:0002036!1.30e-11!61;UBERON:0003082!1.30e-11!61;UBERON:0002385!8.65e-11!63;UBERON:0001015!8.65e-11!63;UBERON:0000383!8.65e-11!63;UBERON:0004872!1.64e-10!84;UBERON:0003104!2.06e-10!238;UBERON:0009142!2.06e-10!238;UBERON:0000468!5.46e-10!659;UBERON:0000947!7.06e-09!21;UBERON:0010191!7.06e-09!21;UBERON:0004535!1.80e-08!110;UBERON:0001009!3.26e-08!113;UBERON:0000481!6.05e-08!347;UBERON:0004237!8.25e-08!10;UBERON:0004695!8.25e-08!10;UBERON:0002111!8.25e-08!10;UBERON:0004178!8.25e-08!10;UBERON:0009569!8.38e-08!113;UBERON:0000483!9.33e-08!309;UBERON:0003102!9.95e-08!95;UBERON:0000119!1.10e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.98e-19;33!UBERON:0004571;2.98e-19;33!UBERON:0001637;2.22e-16;42!UBERON:0003509;2.22e-16;42!UBERON:0004572;2.22e-16;42!UBERON:0000947;4.94e-12;21!UBERON:0010191;4.94e-12;21!UBERON:0004237;9.55e-12;10!UBERON:0004695;9.55e-12;10!UBERON:0002111;9.55e-12;10!UBERON:0004178;9.55e-12;10!UBERON:0007500;3.76e-10;56!UBERON:0001981;3.76e-10;56!UBERON:0004537;3.76e-10;56!UBERON:0000055;4.34e-08;65!UBERON:0001135;4.71e-08;15!UBERON:0003914;1.41e-07;74!UBERON:0002049;1.74e-07;75!UBERON:0007798;1.74e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.87e-24,42;UBERON:0003509,1.87e-24,42;UBERON:0004572,1.87e-24,42;UBERON:0004573,3.50e-22,33;UBERON:0004571,3.50e-22,33;UBERON:0000055,3.46e-18,68;UBERON:0007500,3.70e-18,59;UBERON:0001981,3.70e-18,59;UBERON:0004537,3.70e-18,59;UBERON:0006965,3.70e-18,59;UBERON:0002049,1.05e-15,78;UBERON:0007798,1.05e-15,78;UBERON:0007524,2.97e-13,73;UBERON:0000486,3.94e-13,83;UBERON:0002329,5.72e-13,71;UBERON:0003059,5.72e-13,71;UBERON:0007282,5.72e-13,71;UBERON:0004290,5.72e-13,71;UBERON:0009618,5.72e-13,71;UBERON:0003077,1.28e-12,72;UBERON:0007285,1.28e-12,72;UBERON:0001134,1.51e-12,62;UBERON:0002036,1.51e-12,62;UBERON:0003082,1.51e-12,62;UBERON:0000947,2.28e-12,21;UBERON:0010191,2.28e-12,21;UBERON:0007503,2.84e-12,78;UBERON:0004237,4.15e-12,10;UBERON:0004695,4.15e-12,10;UBERON:0002111,4.15e-12,10;UBERON:0004178,4.15e-12,10;UBERON:0003914,6.68e-12,117;UBERON:0002385,8.28e-12,64;UBERON:0001015,8.28e-12,64;UBERON:0000383,8.28e-12,64;UBERON:0002100,9.08e-12,199;UBERON:0004872,8.53e-11,83;UBERON:0005256,4.66e-10,122;UBERON:0000490,7.58e-10,148;UBERON:0004535,1.17e-08,109;UBERON:0003104,1.49e-08,160;UBERON:0009142,1.49e-08,160;UBERON:0001135,4.07e-08,15;UBERON:0001009,4.28e-08,112;UBERON:0003834,9.30e-07,5;UBERON:0001533,9.30e-07,5 | |||
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| |||
|short_description=p4@CCND1 | |||
}} |
Revision as of 09:07, 11 January 2014
Short description: | p4@CCND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCND1_5end |
Coexpression cluster: | C1350_neuroectodermal_neuroblastoma_Melanocyte_Smooth_leiomyoma_hepatoma_mesenchymal |
Association with transcript: | 112bp_to_ENST00000545484_5end |
EntrezGene: | CCND1 |
HGNC: | 1582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.86e-22 | 32 |
smooth muscle cell | 4.01e-16 | 43 |
smooth muscle myoblast | 4.01e-16 | 43 |
muscle precursor cell | 3.38e-14 | 58 |
myoblast | 3.38e-14 | 58 |
multi-potent skeletal muscle stem cell | 3.38e-14 | 58 |
muscle cell | 4.06e-12 | 55 |
aortic smooth muscle cell | 4.15e-12 | 10 |
electrically responsive cell | 6.00e-10 | 61 |
electrically active cell | 6.00e-10 | 61 |
mesodermal cell | 8.38e-10 | 121 |
embryonic cell | 1.22e-09 | 250 |
fibroblast | 1.38e-08 | 76 |
preadipocyte | 1.68e-07 | 12 |
smooth muscle cell of the subclavian artery | 9.30e-07 | 5 |