FFCP PHASE1:Hg19::chr11:68518910..68518998,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9633 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7446 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y4I5 | |||
|association_with_transcript=0bp_to_ENST00000443940,ENST00000544963,NM_001039656,NM_004923,uc001ooc.2,uc001ood.1,uc009ysi.1_5end | |||
|description=CAGE_peak_1_at_MTL5_5end | |||
|id=chr11:68518910..68518998,- | |||
|ontology_enrichment_celltype=CL:0000066!9.53e-30!254;CL:0000076!1.43e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:1000497;4.89e-08;17!CL:0002518;4.89e-08;17!CL:1000449;3.28e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.73e-30,253;CL:0000076,2.10e-08,63;CL:1000497,4.37e-08,17;CL:0002518,4.37e-08,17;CL:1000449,2.88e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.13e-25!235;DOID:14566!9.32e-24!239;DOID:0050687!2.02e-19!143;DOID:305!8.43e-19!106;DOID:8692!1.25e-13!31;DOID:1240!4.34e-13!39;DOID:0050686!3.90e-12!137;DOID:2531!5.07e-09!51;DOID:0060083!5.07e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.44e-14;31!DOID:1240;1.39e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.31e-26,235;DOID:14566,6.07e-25,239;DOID:0050687,9.33e-20,143;DOID:305,6.08e-19,106;DOID:8692,1.65e-14,31;DOID:1240,9.04e-14,39;DOID:0050686,4.94e-13,137;DOID:2531,2.84e-09,51;DOID:0060083,2.84e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0006554!2.26e-08!44;UBERON:0001008!1.11e-07!45;UBERON:0005153!2.10e-07!37;UBERON:0000072!3.16e-07!46;UBERON:0000065!3.80e-07!53;UBERON:0002113!6.42e-07!27;UBERON:0003918!6.42e-07!27;UBERON:0005095!6.42e-07!27;UBERON:0007687!6.42e-07!27;UBERON:0004119!6.56e-07!169;UBERON:0000925!6.56e-07!169;UBERON:0006595!6.56e-07!169;UBERON:0005177!1.00e-06!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.39e-08;30!UBERON:0001008;2.39e-08;30!UBERON:0002113;9.84e-08;24!UBERON:0011143;9.84e-08;24!UBERON:0006555;3.28e-07;15!UBERON:0004819;3.28e-07;15!UBERON:0001285;3.28e-07;15!UBERON:0007684;3.28e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,4.66e-09,47;UBERON:0001008,1.78e-08,48;UBERON:0005177,4.93e-08,101;UBERON:0002113,4.96e-08,26;UBERON:0003918,4.96e-08,26;UBERON:0011143,4.96e-08,26;UBERON:0005095,4.96e-08,26;UBERON:0007687,4.96e-08,26;UBERON:0004211,2.88e-07,15;UBERON:0009773,2.88e-07,15;UBERON:0001231,2.88e-07,15;UBERON:0001285,2.88e-07,15;UBERON:0007684,2.88e-07,15;UBERON:0004208,2.88e-07,15;UBERON:0005153,2.90e-07,37;UBERON:0000072,5.75e-07,47;UBERON:0006555,5.75e-07,16;UBERON:0004819,5.75e-07,16;UBERON:0000065,8.74e-07,54 | |||
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| |||
|short_description=p1@MTL5 | |||
}} |
Revision as of 09:05, 11 January 2014
Short description: | p1@MTL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MTL5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000443940, ENST00000544963, NM_001039656, NM_004923, uc001ooc.2, uc001ood.1, uc009ysi.1_5end |
EntrezGene: | MTL5 |
HGNC: | 7446 |
UniProt: | Q9Y4I5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.73e-30 | 253 |
squamous epithelial cell | 2.10e-08 | 63 |
kidney cell | 4.37e-08 | 17 |
kidney epithelial cell | 4.37e-08 | 17 |
epithelial cell of nephron | 2.88e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
urinary system structure | 4.66e-09 | 47 |
renal system | 1.78e-08 | 48 |
trunk region element | 4.93e-08 | 101 |
kidney | 4.96e-08 | 26 |
kidney mesenchyme | 4.96e-08 | 26 |
upper urinary tract | 4.96e-08 | 26 |
kidney rudiment | 4.96e-08 | 26 |
kidney field | 4.96e-08 | 26 |
nephron epithelium | 2.88e-07 | 15 |
renal tubule | 2.88e-07 | 15 |
nephron tubule | 2.88e-07 | 15 |
nephron | 2.88e-07 | 15 |
uriniferous tubule | 2.88e-07 | 15 |
nephrogenic mesenchyme | 2.88e-07 | 15 |
epithelial bud | 2.90e-07 | 37 |
segment of respiratory tract | 5.75e-07 | 47 |
excretory tube | 5.75e-07 | 16 |
kidney epithelium | 5.75e-07 | 16 |
respiratory tract | 8.74e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.31e-26 | 235 |
disease of cellular proliferation | 6.07e-25 | 239 |
cell type cancer | 9.33e-20 | 143 |
carcinoma | 6.08e-19 | 106 |
myeloid leukemia | 1.65e-14 | 31 |
leukemia | 9.04e-14 | 39 |
organ system cancer | 4.94e-13 | 137 |
hematologic cancer | 2.84e-09 | 51 |
immune system cancer | 2.84e-09 | 51 |