FFCP PHASE1:Hg19::chr11:65837549..65837593,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55690 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30032 | |||
|TSSclassifier=strong | |||
|UniProt=Q6VY07 | |||
|association_with_transcript=-230bp_to_NM_018026,uc001ogz.1,uc001oha.1_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_3_at_PACS1_5end | |||
|id=chr11:65837549..65837593,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.84e-13!140;CL:0002087!1.63e-11!119;CL:0000838!8.03e-10!52;CL:0002031!9.38e-10!124;CL:0000542!2.07e-09!53;CL:0000051!2.07e-09!53;CL:0000988!2.37e-09!182;CL:0000115!2.44e-09!35;CL:0000791!4.44e-09!18;CL:0000789!4.44e-09!18;CL:0002420!4.44e-09!18;CL:0002419!4.44e-09!18;CL:0000790!4.44e-09!18;CL:0002078!7.66e-09!44;CL:0000037!1.25e-08!172;CL:0000566!1.25e-08!172;CL:0002032!2.94e-08!165;CL:0000837!2.94e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.59e-09;18!CL:0000789;1.59e-09;18!CL:0002419;1.59e-09;18!CL:0000115;2.54e-08;36!CL:0002078;4.18e-07;45!CL:0002139;7.45e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.49e-15,136;CL:0002087,8.35e-13,115;CL:0002031,1.05e-11,120;CL:0000988,1.41e-11,177;CL:0000037,8.01e-11,168;CL:0002032,2.57e-10,161;CL:0000837,2.57e-10,161;CL:0000115,2.59e-10,36;CL:0000838,2.65e-10,52;CL:0000791,2.67e-10,18;CL:0000789,2.67e-10,18;CL:0002420,2.67e-10,18;CL:0002419,2.67e-10,18;CL:0000790,2.67e-10,18;CL:0002078,3.58e-10,45;CL:0000542,8.27e-10,53;CL:0000051,8.27e-10,53;CL:0000766,1.45e-07,72;CL:0002139,4.08e-07,24;CL:0000094,9.99e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.59e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.06e-09!112;UBERON:0000178!4.44e-08!15;UBERON:0000179!4.44e-08!15;UBERON:0000463!4.44e-08!15;UBERON:0003081!1.46e-07!216;UBERON:0002390!4.57e-07!102;UBERON:0003061!4.57e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.91e-08;15!UBERON:0000179;1.91e-08;15!UBERON:0000463;1.91e-08;15!UBERON:0002193;5.62e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.86e-11,108;UBERON:0002390,3.30e-09,98;UBERON:0003061,3.30e-09,98;UBERON:0003081,9.27e-09,203;UBERON:0000178,2.24e-08,15;UBERON:0000179,2.24e-08,15;UBERON:0000463,2.24e-08,15;UBERON:0004535,1.52e-07,109;UBERON:0001009,3.34e-07,112;UBERON:0002405,9.48e-07,93 | |||
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| |||
|short_description=p3@PACS1 | |||
}} |
Revision as of 08:47, 11 January 2014
Short description: | p3@PACS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PACS1_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -230bp_to_NM_018026, uc001ogz.1, uc001oha.1_5end |
EntrezGene: | PACS1 |
HGNC: | 30032 |
UniProt: | Q6VY07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.49e-15 | 136 |
nongranular leukocyte | 8.35e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 1.05e-11 | 120 |
hematopoietic cell | 1.41e-11 | 177 |
hematopoietic stem cell | 8.01e-11 | 168 |
hematopoietic oligopotent progenitor cell | 2.57e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.57e-10 | 161 |
endothelial cell | 2.59e-10 | 36 |
lymphoid lineage restricted progenitor cell | 2.65e-10 | 52 |
mature alpha-beta T cell | 2.67e-10 | 18 |
alpha-beta T cell | 2.67e-10 | 18 |
immature T cell | 2.67e-10 | 18 |
mature T cell | 2.67e-10 | 18 |
immature alpha-beta T cell | 2.67e-10 | 18 |
meso-epithelial cell | 3.58e-10 | 45 |
lymphocyte | 8.27e-10 | 53 |
common lymphoid progenitor | 8.27e-10 | 53 |
myeloid leukocyte | 1.45e-07 | 72 |
endothelial cell of vascular tree | 4.08e-07 | 24 |
granulocyte | 9.99e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.86e-11 | 108 |
hematopoietic system | 3.30e-09 | 98 |
blood island | 3.30e-09 | 98 |
lateral plate mesoderm | 9.27e-09 | 203 |
blood | 2.24e-08 | 15 |
haemolymphatic fluid | 2.24e-08 | 15 |
organism substance | 2.24e-08 | 15 |
cardiovascular system | 1.52e-07 | 109 |
circulatory system | 3.34e-07 | 112 |
immune system | 9.48e-07 | 93 |