FFCP PHASE1:Hg19::chr11:64085563..64085736,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9355 | |||
|TSSclassifier=strong | |||
|UniProt=A6NC19,A6NG06 | |||
|association_with_transcript=0bp_to_ENST00000347941,ENST00000352435,uc001nzu.2,uc001nzv.2,uc001nzw.2_5end | |||
|coexpression_cluster_id=C385 | |||
|description=CAGE_peak_1_at_PRDX5_5end | |||
|id=chr11:64085563..64085736,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.36e-18!246;CL:0002321!1.44e-18!248;CL:0000183!1.80e-16!59;CL:0000222!8.46e-15!119;CL:0000192!1.10e-14!42;CL:0000514!1.10e-14!42;CL:0000393!4.62e-14!60;CL:0000211!4.62e-14!60;CL:0000187!5.75e-14!54;CL:0000680!1.85e-13!57;CL:0000056!1.85e-13!57;CL:0000355!1.85e-13!57;CL:0000066!6.63e-13!254;CL:0000359!1.78e-12!32;CL:0000055!1.67e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.08e-11;32!CL:0000192;7.02e-11;43!CL:0000187;5.28e-08;55!CL:0000393;2.07e-07;61!CL:0000211;2.07e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.56e-19,250;CL:0000222,1.38e-15,121;CL:0000192,3.18e-15,43;CL:0000514,3.18e-15,43;CL:0000393,1.47e-14,61;CL:0000211,1.47e-14,61;CL:0000187,1.78e-14,55;CL:0000680,5.89e-14,58;CL:0000056,5.89e-14,58;CL:0000355,5.89e-14,58;CL:0000066,1.43e-12,253;CL:0000359,1.78e-12,32 | |||
|ontology_enrichment_development_v019=CL:0000514;7.02e-11;43!CL:0000355;1.60e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.25e-22!347;UBERON:0000483!8.27e-16!309;UBERON:0000119!1.52e-15!312;UBERON:0003104!2.40e-15!238;UBERON:0009142!2.40e-15!238;UBERON:0005256!1.34e-14!143;UBERON:0000475!7.35e-14!365;UBERON:0002100!8.81e-14!216;UBERON:0000486!1.36e-13!82;UBERON:0001134!1.53e-13!61;UBERON:0002036!1.53e-13!61;UBERON:0003082!1.53e-13!61;UBERON:0000477!2.98e-13!286;UBERON:0000914!7.84e-13!83;UBERON:0002329!7.84e-13!83;UBERON:0003077!7.84e-13!83;UBERON:0003059!7.84e-13!83;UBERON:0007282!7.84e-13!83;UBERON:0009618!7.84e-13!83;UBERON:0007285!7.84e-13!83;UBERON:0002385!1.80e-12!63;UBERON:0001015!1.80e-12!63;UBERON:0000383!1.80e-12!63;UBERON:0004290!3.56e-12!70;UBERON:0001009!5.48e-12!113;UBERON:0003914!5.75e-12!118;UBERON:0000468!6.01e-12!659;UBERON:0004111!3.66e-11!241;UBERON:0004535!4.39e-11!110;UBERON:0004872!7.95e-11!84;UBERON:0000922!8.15e-11!612;UBERON:0000064!9.98e-11!219;UBERON:0000923!1.38e-10!604;UBERON:0005291!1.38e-10!604;UBERON:0006598!1.38e-10!604;UBERON:0002532!1.38e-10!604;UBERON:0002050!1.61e-10!605;UBERON:0005423!1.61e-10!605;UBERON:0002049!1.93e-10!79;UBERON:0007798!1.93e-10!79;UBERON:0000025!3.70e-10!194;UBERON:0000480!4.25e-10!626;UBERON:0000467!4.29e-10!625;UBERON:0000490!1.66e-09!138;UBERON:0003103!4.12e-09!69;UBERON:0001048!5.03e-09!168;UBERON:0001637!2.27e-08!42;UBERON:0003509!2.27e-08!42;UBERON:0004572!2.27e-08!42;UBERON:0001981!2.55e-08!60;UBERON:0007500!2.55e-08!60;UBERON:0004537!2.55e-08!60;UBERON:0006965!2.55e-08!60;UBERON:0000055!4.94e-08!69;UBERON:0004573!4.39e-07!33;UBERON:0004571!4.39e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,6.95e-16,306;UBERON:0000119,1.29e-15,309;UBERON:0007503,2.84e-15,78;UBERON:0000486,4.75e-14,83;UBERON:0001134,4.94e-14,62;UBERON:0002036,4.94e-14,62;UBERON:0003082,4.94e-14,62;UBERON:0003104,8.65e-14,160;UBERON:0009142,8.65e-14,160;UBERON:0002385,6.07e-13,64;UBERON:0001015,6.07e-13,64;UBERON:0000383,6.07e-13,64;UBERON:0007524,6.77e-13,73;UBERON:0003077,8.38e-13,72;UBERON:0007285,8.38e-13,72;UBERON:0002329,1.25e-12,71;UBERON:0003059,1.25e-12,71;UBERON:0007282,1.25e-12,71;UBERON:0004290,1.25e-12,71;UBERON:0009618,1.25e-12,71;UBERON:0002100,1.55e-12,199;UBERON:0005256,4.23e-12,122;UBERON:0001009,8.86e-12,112;UBERON:0003914,1.40e-11,117;UBERON:0004111,3.47e-11,240;UBERON:0004535,7.03e-11,109;UBERON:0004872,1.29e-10,83;UBERON:0002049,3.14e-10,78;UBERON:0007798,3.14e-10,78;UBERON:0000025,4.37e-10,192;UBERON:0000490,1.84e-09,148;UBERON:0000922,3.04e-09,592;UBERON:0001048,8.65e-09,160;UBERON:0005423,9.82e-09,581;UBERON:0003103,1.04e-08,68;UBERON:0001637,2.27e-08,42;UBERON:0003509,2.27e-08,42;UBERON:0004572,2.27e-08,42;UBERON:0007500,4.09e-08,59;UBERON:0001981,4.09e-08,59;UBERON:0004537,4.09e-08,59;UBERON:0006965,4.09e-08,59;UBERON:0000055,7.80e-08,68;UBERON:0002050,1.02e-07,564;UBERON:0004573,4.39e-07,33;UBERON:0004571,4.39e-07,33;UBERON:0000923,4.66e-07,560;UBERON:0010316,4.66e-07,560;UBERON:0005291,4.66e-07,560;UBERON:0006598,4.66e-07,560;UBERON:0010317,4.66e-07,560;UBERON:0002532,4.66e-07,560 | |||
|phase1_expression=157.151798069031,156.507482964309,110.790161619433,236.172984113388,219.457897363798,300.956790814627,235.568886696529,159.193408103561,226.97031090566,119.180959203232,431.24112180696,222.373316828515,297.529151441696,236.641266859609,340.345104872569,295.150739292329,259.15864705031,359.312564470588,277.633762511798,197.116813980937,305.797036175135,391.191492404654,137.107037835776,112.100154134692,128.806748224268,95.3639303734432,94.2514766885377,94.9252022642972,108.568540410298,51.8169687431237,55.1145399005231,538.780837544651,337.651834950418,307.635336458767,67.6288661066033,80.1834471229057,91.0161361938026,57.6155224873153,44.7214117858416,55.9888046446898,65.8311494265378,55.3858168892455,50.4848112563006,52.1979677218637,68.0176698639857,59.6756790522028,45.5560912335142,56.3300006589901,61.0121550663354,54.9492469335307,62.2470516865715,71.1811511964642,41.7142273691308,40.0200503821972,48.753535173963,56.8491865418666,54.3083238615113,82.9229657602362,57.2376878733588,59.6927990361534,58.8190155735118,54.7553158309949,57.44553339503,64.3599373304368,59.7831031574883,74.3274644345393,62.2822248995575,74.6208535812527,75.6150231709292,60.3784988280224,61.7507492686036,72.5506942895502,76.2674353732532,93.5860918361902,69.7342103885343,104.410005463171,70.5423803599989,66.0778328502628,55.4503274104926,95.7642818970595,72.4056705004688,89.5054353446706,87.9981222306614,80.2823758555333,82.7243606093106,89.6133467389665,67.6669218090861,71.2693025543559,89.2410578259564,92.5432141899303,32.4451392392386,41.6938404453367,36.3159566718967,81.946223718996,52.1272963572829,66.8995575328696,17.1137499999035,37.7290332239198,34.335450332918,48.316897167906,37.1551383962293,41.1899590989218,38.9653456815823,60.6072885455344,42.4232506763766,41.6483721817208,36.8293254720421,55.4635414412173,67.7609200786966,82.8767039202528,105.565706794194,63.4668757759765,28.9158798166018,29.9645727460479,43.9049199980903,50.0827294723243,51.3515461426574,42.9534306853287,34.4106781146524,55.7489475067169,64.4572619317854,54.1757665335573,49.3886390575095,44.7953139040464,49.9722906209383,50.9071091894636,64.0479837598416,25.2008429030916,40.9183499548766,32.1510176619814,282.815964924196,255.537027547085,190.898804832391,160.478983658747,247.660927854129,158.027552186259,91.4578839108764,234.55800748587,170.068136078158,221.729397462564,185.507067383882,118.470573787681,492.527229771517,367.076598356585,72.0495213913397,66.5175596483201,68.6063076277344,57.9532217061981,106.391053405104,95.0931203403686,135.555961824093,173.767388211437,175.653093813443,239.69056737578,162.765781249443,132.882014257053,108.886377565678,151.432220873227,127.364322041842,87.3620799315789,185.301485870208,250.129522781391,168.646881765785,92.6510962471589,277.878688123444,70.9039842575593,155.598855229936,125.674412219388,185.513131333719,159.476630807446,183.751349162198,209.530863723341,124.089684527464,404.259186336129,222.146462407807,127.263664222903,76.1352789676008,96.6639411923502,153.571409491889,289.870319273573,288.222288470203,279.227664808225,82.1597133455383,191.558575683096,151.856107992403,249.285683331202,305.949415898879,227.76043174245,162.947560105427,121.510497988968,162.749613120911,101.228537830925,94.5337995109888,87.7817541889053,116.367877615289,122.711482994456,113.348381949815,128.304308586462,158.250834738276,159.278238339155,496.565135995021,94.6048960421852,80.200971237929,35.1871426664912,140.472838681868,212.70253028452,167.214959563042,155.175226562909,43.9504607437712,159.100254669833,133.940961532843,64.5195856581465,122.941667381458,120.060491661263,191.328128308874,37.2995694253198,131.734830977941,75.4776984989902,159.890673941674,166.01050035292,79.5221487237216,123.723576623542,103.940643086329,253.944761056572,149.464874083777,186.709791598242,147.954105535199,150.553816813207,145.707204358376,140.668051655858,175.362991358562,196.722796541872,181.481457502586,305.53944564162,149.185715060679,162.528774811193,321.236369342966,215.909910072715,224.217637803875,210.161618058396,212.757073400788,220.9297563097,219.712593296875,244.044667769898,242.529730894928,234.311018580352,231.78081275214,276.276294392788,302.506898328579,579.214322859035,237.031915116824,220.153296535788,146.515896856988,127.582835730834,99.7436236584651,183.234421398825,194.916506885719,241.663769503882,200.655828933615,152.030226950306,210.79797353578,285.982065951884,186.187431212603,199.632157367082,250.667562193479,140.179820776003,203.713625533709,149.920271960863,126.432703673484,129.631410476326,81.0053950027537,76.2853904353915,80.8553522850682,448.985064796662,307.91124098851,242.860741576208,183.415854495433,180.774309755684,286.386861336413,34.486426652716,47.0178637630627,23.2207489405665,21.4738730591273,24.2385472178649,96.1358119583439,98.9350022195939,160.587902677764,183.047517244295,110.539554656073,151.973587269022,146.343133506856,118.522556153046,198.797791387976,70.6247692455749,195.4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| |||
|short_description=p1@PRDX5 | |||
}} |
Revision as of 08:24, 11 January 2014
Short description: | p1@PRDX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRDX5_5end |
Coexpression cluster: | C385_Mesenchymal_Alveolar_Osteoblast_Smooth_Renal_Placental_Fibroblast |
Association with transcript: | 0bp_to_ENST00000347941, ENST00000352435, uc001nzu.2, uc001nzv.2, uc001nzw.2_5end |
EntrezGene: | PRDX5 |
HGNC: | 9355 |
UniProt: | A6NC19A6NG06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.56e-19 | 250 |
mesodermal cell | 1.38e-15 | 121 |
smooth muscle cell | 3.18e-15 | 43 |
smooth muscle myoblast | 3.18e-15 | 43 |
electrically responsive cell | 1.47e-14 | 61 |
electrically active cell | 1.47e-14 | 61 |
muscle cell | 1.78e-14 | 55 |
muscle precursor cell | 5.89e-14 | 58 |
myoblast | 5.89e-14 | 58 |
multi-potent skeletal muscle stem cell | 5.89e-14 | 58 |
epithelial cell | 1.43e-12 | 253 |
vascular associated smooth muscle cell | 1.78e-12 | 32 |