FFCP PHASE1:Hg19::chr11:64002306..64002317,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7423 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12681 | |||
|TSSclassifier=strong | |||
|UniProt=P49765 | |||
|association_with_transcript=0bp_to_U43369_5end | |||
|description=CAGE_peak_5_at_VEGFB_5end | |||
|id=chr11:64002306..64002317,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.25e-17;13!CL:0002521;1.09e-08;3!CL:0002567;4.72e-08;3!CL:0000097;7.97e-08;5!CL:0000784;2.22e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.02e-14,15;CL:0002521,1.12e-08,3;CL:0002567,3.41e-08,3;CL:0000784,5.58e-08,3;CL:0000097,9.51e-08,5;CL:0002028,9.51e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.71e-07;3!DOID:127;1.71e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,5.85e-08,3;DOID:127,5.85e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.87e-09;9!UBERON:0000042;5.87e-09;9!UBERON:0002190;1.09e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.12e-08,3 | |||
|phase1_expression=1.81678379270557,1.71280419112787,2.11431606143957,0,2.23480547213644,4.36169262050184,12.6649939084155,5.05375898741465,3.13422753839806,0,0,0,0.263766978228454,0.618831764800233,0.662794751455832,0,0,0,0.975865597581014,0.123121058076788,0.204000691244253,0.626909442956176,0,0,0.376627918784408,0.229240217243854,0.0821005894499457,0,0.393364276848904,0,0.309632246632152,0,0,0.369754010166788,0.154934401160603,0,0.293600439334847,0,0,0,1.79132379391939,1.6194683300949,0.77272670290256,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0.661044872784862,0,0,1.17447437874188,0.382273228125229,0,0,0.263384084775077,0,0,0.411202997999018,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0.25618263945135,0.260118695119756,0.164437904603676,0,0.289803085735052,0.296573126324121,0,0,0.339928028092699,0,0.34362744548263,0,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,2.43806866313962,0.670700859703636,0,0,0,1.01392563272577,0,0,0.283604451492204,0.665188192387692,0.175669571386252,0.130979075497713,0,0,0.324547393654683,0.348259474598534,0.398873881556595,1.90792499444274,2.85997455390064,1.85728750664782,0,0,0.347140501607594,0,0.838998872419812,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0.805658634218294,0.760272105718513,0.976248230192678,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0.496971951695318,1.2663051166458,0.132409180813219,0.573673241497627,1.06400514659507,0,0,1.2333377420858,0.311211035399766,0.538842688278752,0.326923806226917,0.302714855289863,0,0.234321431833797,0.936480230490962,1.1409436430889,0.747243402759005,0.117434498643765,0,0,0,0.122834317311768,0.516628905878827,1.18800285728205,1.7308685049499,1.82032272387605,1.43723628363248,0,0.250237039743928,0.277064115484183,0.438977620880838,0.612975591598039,1.05166641234618,0,0.179389635688862,0.85422955527427,0.211931901159562,0,0.515262646192195,0.257640540045629,0.37223371266318,0.168776332241266,0.194874010322397,0.252433774244115,0.460249493211497,0.484938170456436,0,0.503760491138201,0.169560592310488,0.193260853163297,0,0,0.365921118388786,0.132529768321485,0.232387885739037,0,0.756962552626885,0.72995471815166,0,0.643240938192885,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0.949082476444386,0,0.588664395376038,0,1.4763109092493,2.80483547606892,0.4115740113314,0,0,0.982827216677626,0.590789906681404,0.441463099414651,0.245976877086227,0.171567810298526,0.768251997860379,0,0.100528972411631,0.185176890317059,0.651616610620649,0,0,0.463721619900307,0.234817388471643,0.288732895522148,0.925971025153221,0.190254152234598,0,0,0.984868024349589,0,0.297262324577456,0,0.16798212819886,0,0,0.290633938513962,0,0.492663237895943,1.23267807618516,3.10992173311158,1.29707958075265,4.4184851699233,0.380987365753014,3.05590740446622,5.86087236050235,1.71072446022705,0.925447434329912,0.901029173531752,2.00078502841405,0,0,0.07333828582095,0.387815147273333,7.15312891703765,0,0.797814349754612,5.2003718455683,0,0,0,0.57191197463259,0.542621605391443,0,0.325736184293735,0,0,0.602878754119172,0,0.499864955910285,0,1.00451418286425,6.32501818449095,0.239624855491583,2.29723871668228,0,0.289562613335158,0.61642896765115,0.716243852959582,0.224170287987055,0.197030760201927,0.215627574859517,0.385029108839245,0.254094624222463,2.60279707715243,0,0.167516265334349,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.623912584592421,0.356857977594324,0.630809660135739,0.234282829985426,1.80567659836631,11.3703752027992,16.5556914068008,0.664225598535437,0.921845842708516,0.955719759148911,2.15381273209015,0.686286847621712,0.206768026122887,0,0.320182673410333,0.303127571446259,0,0.604780586659361,1.24053903909388,0.153461973288062,0.841980283299221,1.66580894032411,0,1.28683136914886,0,0.462629081407967,0,0.98552587216571,1.55776328755086,0.929683027679674,1.20859449591622,0.802025881213139,0.644566922551274,0.459257792658427,0.546273504020151,2.09799063935079,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0,1.54227252690289,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0.650756789328606,0.206082023295445,0.366277859273374,0.247528499761764,0,0,1.6068392984416,1.83674364755032,0.154048617114644,0.15350367472613,0.137836572484531,0.322260734604821,0.145016693914229,0.0852266274161009,0.445160178233687,0.165284915360978,0.192190067365106,0,0.2023155617111,1.39453664789186,0,2.0911118104818,0.308033580176089,1.06461206063404,0.869932992075073,0.55597265731176,0,0.372158369359667,0,0.190630193923825,1.02359116524534,0.42793898803392,0.318203247925937,0.78494864019923,0.179872457583315,0,0.471249609382746,0.808729926293264,1.58510321173008,0.421258456238981,0.975267478179181,0.243713489631284,1.05650146756755,0.545999645631943,0.9898380236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| |||
|short_description=p5@VEGFB | |||
}} |
Revision as of 08:21, 11 January 2014
Short description: | p5@VEGFB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_VEGFB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_U43369_5end |
EntrezGene: | VEGFB |
HGNC: | 12681 |
UniProt: | P49765 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.02e-14 | 15 |
subcutaneous fat cell | 1.12e-08 | 3 |
light melanocyte | 3.41e-08 | 3 |
plasmacytoid dendritic cell | 5.58e-08 | 3 |
mast cell | 9.51e-08 | 5 |
basophil mast progenitor cell | 9.51e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 5.85e-08 | 3 |
leiomyoma | 5.85e-08 | 3 |