FFCP PHASE1:Hg19::chr11:61722513..61722562,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr11:61722513..61722562,- | |||
|id=chr11:61722513..61722562,- | |||
|ontology_enrichment_celltype=CL:0002057!3.57e-66!42;CL:0000860!5.20e-61!45;CL:0000766!3.66e-58!76;CL:0002194!6.64e-50!63;CL:0000576!6.64e-50!63;CL:0000040!6.64e-50!63;CL:0000559!6.64e-50!63;CL:0002009!5.04e-48!65;CL:0000839!8.66e-44!70;CL:0000557!5.17e-43!71;CL:0000763!5.09e-37!112;CL:0000049!5.09e-37!112;CL:0000738!2.81e-31!140;CL:0002087!1.00e-26!119;CL:0000037!4.58e-24!172;CL:0000566!4.58e-24!172;CL:0002032!3.12e-23!165;CL:0000837!3.12e-23!165;CL:0002031!1.92e-22!124;CL:0000988!5.72e-22!182;CL:0002393!1.34e-15!9;CL:0002397!1.34e-15!9;CL:0000094!2.53e-15!8;CL:0000134!1.41e-11!358;CL:0002320!4.70e-11!365;CL:0000081!8.85e-11!11;CL:0000048!1.07e-09!430;CL:0000723!2.47e-09!436;CL:0000219!3.17e-09!390;CL:0000775!6.03e-09!3;CL:0000034!7.18e-09!444 | |||
|ontology_enrichment_celltype_v019=CL:0000094;4.67e-27;8!CL:0000860;4.94e-27;33!CL:0002057;4.94e-27;33!CL:0000775;1.13e-26;3!CL:0000473;1.74e-21;39!CL:0000234;1.74e-21;39!CL:0000081;1.17e-19;11!CL:0000771;1.88e-18;2!CL:0000576;4.20e-16;48!CL:0000766;6.19e-14;69!CL:0000763;9.31e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.84e-34,72;CL:0000094,4.68e-27,8;CL:0000473,1.04e-26,48;CL:0000234,1.04e-26,48;CL:0000775,1.14e-26,3;CL:0000860,4.02e-26,42;CL:0002057,4.02e-26,42;CL:0000763,9.68e-22,108;CL:0000049,9.68e-22,108;CL:0002194,6.26e-21,59;CL:0000576,6.26e-21,59;CL:0000040,6.26e-21,59;CL:0000559,6.26e-21,59;CL:0002009,3.49e-20,61;CL:0000081,1.17e-19,11;CL:0000839,1.64e-18,66;CL:0000771,1.89e-18,2;CL:0000557,3.30e-18,67;CL:0000738,1.15e-16,136;CL:0002032,1.31e-13,161;CL:0000837,1.31e-13,161;CL:0000037,6.50e-13,168;CL:0000988,4.22e-12,177;CL:0002087,9.42e-10,115;CL:0002031,2.95e-09,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.67e-21;42!UBERON:0005425;1.68e-09;1!CL:0000049;3.26e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.42e-43!102;UBERON:0003061!2.42e-43!102;UBERON:0002193!2.98e-38!112;UBERON:0002371!6.70e-37!80;UBERON:0001474!1.55e-33!86;UBERON:0004765!7.06e-27!101;UBERON:0001434!7.06e-27!101;UBERON:0002405!1.55e-23!115;UBERON:0002204!1.97e-15!167;UBERON:0003081!1.82e-13!216;UBERON:0002384!2.42e-10!375;UBERON:0000178!4.00e-09!15;UBERON:0000179!4.00e-09!15;UBERON:0000463!4.00e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.68e-09;1!UBERON:0001785;1.68e-09;1!UBERON:0002464;1.68e-09;1!UBERON:0004904;1.68e-09;1!UBERON:0001021;1.68e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.39e-18,98;UBERON:0003061,1.39e-18,98;UBERON:0002193,1.27e-16,108;UBERON:0002371,8.04e-16,76;UBERON:0001474,1.62e-14,82;UBERON:0004765,4.81e-13,90;UBERON:0002405,1.48e-12,93;UBERON:0001434,1.56e-11,100;UBERON:0000941,1.36e-09,1;UBERON:0001785,1.36e-09,1;UBERON:0002464,1.36e-09,1;UBERON:0004904,1.36e-09,1;UBERON:0001021,1.36e-09,1;UBERON:0003902,1.36e-09,1;UBERON:0005425,1.36e-09,1;UBERON:0003081,1.45e-07,203 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0.553995408531877,1.40381113229099,0.651032612147555,0.223915474239924,0,0,0.872389432677388,0.377875943688809,0.485168122375632,0.929716147622738,0,1.54853185447552,1.1507695692886,0.256160706529101,1.18241114944293,0.689491361473237,0.645484683583826,2.70852973188684,1.50593871634084,1.09162460023138,2.47195832889593,0.918251677112708,0.641858054152187,0.639337125799041,0,0.199463657621632,0.426224750532694,0.580418477257168,0,0.622822248995575,0.75374599577023,1.0429658368404,1.73751075764093,1.21079900526674,0,0,0.633765858935825,0.425208599930087,0.419317291016752,2.69588714751588,0.901061357049038,0.803627933485401,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,34.9002237733493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0,0,0,12.7331194071021,8.97484377612075,18.2342825911856,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.647142602455851,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0,2.05681136543097,0.648473311192717,3.7802200606668,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:61722513..61722562,- | |||
}} |
Revision as of 08:04, 11 January 2014
Short description: | p@chr11:61722513..61722562, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:61722513..61722562, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.84e-34 | 72 |
granulocyte | 4.68e-27 | 8 |
defensive cell | 1.04e-26 | 48 |
phagocyte | 1.04e-26 | 48 |
neutrophil | 1.14e-26 | 3 |
classical monocyte | 4.02e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.02e-26 | 42 |
myeloid cell | 9.68e-22 | 108 |
common myeloid progenitor | 9.68e-22 | 108 |
monopoietic cell | 6.26e-21 | 59 |
monocyte | 6.26e-21 | 59 |
monoblast | 6.26e-21 | 59 |
promonocyte | 6.26e-21 | 59 |
macrophage dendritic cell progenitor | 3.49e-20 | 61 |
blood cell | 1.17e-19 | 11 |
myeloid lineage restricted progenitor cell | 1.64e-18 | 66 |
eosinophil | 1.89e-18 | 2 |
granulocyte monocyte progenitor cell | 3.30e-18 | 67 |
leukocyte | 1.15e-16 | 136 |
hematopoietic oligopotent progenitor cell | 1.31e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-13 | 161 |
hematopoietic stem cell | 6.50e-13 | 168 |
hematopoietic cell | 4.22e-12 | 177 |
nongranular leukocyte | 9.42e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.95e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.39e-18 | 98 |
blood island | 1.39e-18 | 98 |
hemolymphoid system | 1.27e-16 | 108 |
bone marrow | 8.04e-16 | 76 |
bone element | 1.62e-14 | 82 |
skeletal element | 4.81e-13 | 90 |
immune system | 1.48e-12 | 93 |
skeletal system | 1.56e-11 | 100 |
cranial nerve II | 1.36e-09 | 1 |
cranial nerve | 1.36e-09 | 1 |
nerve trunk | 1.36e-09 | 1 |
nerve connecting eye with brain | 1.36e-09 | 1 |
nerve | 1.36e-09 | 1 |
retinal neural layer | 1.36e-09 | 1 |
presumptive neural retina | 1.36e-09 | 1 |
lateral plate mesoderm | 1.45e-07 | 203 |