FFCP PHASE1:Hg19::chr11:60722191..60722202,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr11:60722191..60722202,+ | |||
|id=chr11:60722191..60722202,+ | |||
|ontology_enrichment_celltype=CL:0002393!1.47e-58!9;CL:0002397!1.47e-58!9;CL:0000766!2.38e-48!76;CL:0002057!1.60e-46!42;CL:0000860!3.50e-43!45;CL:0000738!1.97e-36!140;CL:0002194!9.37e-33!63;CL:0000576!9.37e-33!63;CL:0000040!9.37e-33!63;CL:0000559!9.37e-33!63;CL:0002009!1.20e-31!65;CL:0000763!1.84e-31!112;CL:0000049!1.84e-31!112;CL:0000094!1.19e-29!8;CL:0000839!3.78e-29!70;CL:0000037!9.15e-29!172;CL:0000566!9.15e-29!172;CL:0000557!1.08e-28!71;CL:0000988!6.45e-27!182;CL:0002087!2.52e-26!119;CL:0002032!1.09e-23!165;CL:0000837!1.09e-23!165;CL:0000081!1.94e-21!11;CL:0000875!2.28e-20!3;CL:0002396!2.28e-20!3;CL:0000842!8.99e-20!3;CL:0002031!1.41e-18!124;CL:0000224!5.59e-15!4;CL:0000771!7.36e-15!2;CL:0000134!3.66e-11!358;CL:0002320!7.58e-11!365;CL:0000080!3.66e-10!6;CL:0000775!4.02e-10!3;CL:0000219!9.89e-10!390;CL:0000767!2.03e-09!3;CL:0000048!2.16e-08!430;CL:0000723!3.34e-08!436;CL:0000034!5.90e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0002393;4.42e-84;6!CL:0002397;4.42e-84;6!CL:0000771;4.49e-30;2!CL:0000094;3.08e-29;8!CL:0000081;2.23e-21;11!CL:0000775;3.32e-20;3!CL:0000875;1.39e-19;3!CL:0002396;1.39e-19;3!CL:0000766;2.04e-17;69!CL:0000576;2.51e-14;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,7.39e-99,9;CL:0002397,7.39e-99,9;CL:0000766,1.38e-31,72;CL:0000771,4.49e-30,2;CL:0000094,2.87e-29,8;CL:0000860,2.78e-26,42;CL:0002057,2.78e-26,42;CL:0000473,6.64e-23,48;CL:0000234,6.64e-23,48;CL:0000081,2.12e-21,11;CL:0000763,9.04e-21,108;CL:0000049,9.04e-21,108;CL:0000775,3.01e-20,3;CL:0000875,1.69e-19,3;CL:0002396,1.69e-19,3;CL:0000738,5.24e-19,136;CL:0002194,3.63e-18,59;CL:0000576,3.63e-18,59;CL:0000040,3.63e-18,59;CL:0000559,3.63e-18,59;CL:0002009,1.49e-17,61;CL:0000839,3.49e-16,66;CL:0000557,6.22e-16,67;CL:0000037,3.65e-15,168;CL:0000988,2.49e-14,177;CL:0002032,1.47e-13,161;CL:0000837,1.47e-13,161;CL:0002087,4.13e-11,115;CL:0002031,1.47e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;6.16e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.76e-29!102;UBERON:0003061!9.76e-29!102;UBERON:0002193!8.47e-26!112;UBERON:0002371!4.44e-25!80;UBERON:0001474!4.38e-23!86;UBERON:0004765!3.99e-19!101;UBERON:0001434!3.99e-19!101;UBERON:0002405!2.36e-16!115;UBERON:0003081!2.87e-11!216;UBERON:0002384!2.05e-10!375;UBERON:0002204!4.15e-10!167;UBERON:0000178!5.69e-07!15;UBERON:0000179!5.69e-07!15;UBERON:0000463!5.69e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.69e-14,76;UBERON:0002390,3.37e-13,98;UBERON:0003061,3.37e-13,98;UBERON:0001474,6.72e-13,82;UBERON:0002193,6.82e-12,108;UBERON:0004765,1.09e-11,90;UBERON:0002405,2.76e-11,93;UBERON:0001434,1.93e-10,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.928896739896456,0,0,0,0,0,0,2.76997704265939,2.00544447470142,3.03815219002193,0,0.32389366601898,0,0,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0.449446968890169,0.612167784741805,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0.736555271975129,0,1.90129757680748,1.91343869968539,3.35453832813401,0.786300418025466,1.20141514273205,0.964353520182481,1.14005097496499,0.99458338599545,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,3.74503511973591,0,5.38740167466846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:60722191..60722202,+ | |||
}} |
Revision as of 07:57, 11 January 2014
Short description: | p@chr11:60722191..60722202, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60722191..60722202, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 7.39e-99 | 9 |
CD14-positive, CD16-positive monocyte | 7.39e-99 | 9 |
myeloid leukocyte | 1.38e-31 | 72 |
eosinophil | 4.49e-30 | 2 |
granulocyte | 2.87e-29 | 8 |
classical monocyte | 2.78e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.78e-26 | 42 |
defensive cell | 6.64e-23 | 48 |
phagocyte | 6.64e-23 | 48 |
blood cell | 2.12e-21 | 11 |
myeloid cell | 9.04e-21 | 108 |
common myeloid progenitor | 9.04e-21 | 108 |
neutrophil | 3.01e-20 | 3 |
non-classical monocyte | 1.69e-19 | 3 |
CD14-low, CD16-positive monocyte | 1.69e-19 | 3 |
leukocyte | 5.24e-19 | 136 |
monopoietic cell | 3.63e-18 | 59 |
monocyte | 3.63e-18 | 59 |
monoblast | 3.63e-18 | 59 |
promonocyte | 3.63e-18 | 59 |
macrophage dendritic cell progenitor | 1.49e-17 | 61 |
myeloid lineage restricted progenitor cell | 3.49e-16 | 66 |
granulocyte monocyte progenitor cell | 6.22e-16 | 67 |
hematopoietic stem cell | 3.65e-15 | 168 |
hematopoietic cell | 2.49e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.47e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-13 | 161 |
nongranular leukocyte | 4.13e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.47e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.69e-14 | 76 |
hematopoietic system | 3.37e-13 | 98 |
blood island | 3.37e-13 | 98 |
bone element | 6.72e-13 | 82 |
hemolymphoid system | 6.82e-12 | 108 |
skeletal element | 1.09e-11 | 90 |
immune system | 2.76e-11 | 93 |
skeletal system | 1.93e-10 | 100 |