FFCP PHASE1:Hg19::chr11:57176694..57176742,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29015 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17466 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-472bp_to_ENST00000525651_5end | |||
|coexpression_cluster_id=C2137 | |||
|description=CAGE_peak_6_at_SLC43A3_5end | |||
|id=chr11:57176694..57176742,- | |||
|ontology_enrichment_celltype=CL:0000763!1.78e-17!112;CL:0000049!1.78e-17!112;CL:0002057!1.09e-15!42;CL:0000839!1.18e-14!70;CL:0002009!1.91e-14!65;CL:0000557!3.38e-14!71;CL:0002194!7.00e-14!63;CL:0000576!7.00e-14!63;CL:0000040!7.00e-14!63;CL:0000559!7.00e-14!63;CL:0000860!2.90e-13!45;CL:0000219!1.41e-11!390;CL:0000766!2.16e-11!76;CL:0002032!1.69e-10!165;CL:0000837!1.69e-10!165;CL:0000134!3.26e-10!358;CL:0000034!5.26e-10!444;CL:0002320!5.39e-10!365;CL:0000723!6.49e-10!436;CL:0000048!9.27e-10!430;CL:0002371!2.26e-09!591;CL:0000037!4.08e-09!172;CL:0000566!4.08e-09!172;CL:0000988!1.72e-08!182;CL:0000012!2.51e-08!682;CL:0000548!4.07e-08!679;CL:0000004!4.07e-08!679;CL:0000255!4.07e-08!679;CL:0000144!4.79e-08!625;CL:0000063!8.44e-08!578;CL:0002031!2.20e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.55e-36;33!CL:0002057;4.55e-36;33!CL:0000473;9.48e-35;39!CL:0000234;9.48e-35;39!CL:0000576;1.61e-17;48!CL:0000766;2.16e-12;69!CL:0000763;3.08e-10;100!CL:0000235;2.54e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.77e-36,48;CL:0000234,2.77e-36,48;CL:0000860,1.49e-30,42;CL:0002057,1.49e-30,42;CL:0002194,1.35e-29,59;CL:0000576,1.35e-29,59;CL:0000040,1.35e-29,59;CL:0000559,1.35e-29,59;CL:0002009,3.27e-28,61;CL:0000839,1.54e-26,66;CL:0000557,5.96e-26,67;CL:0000763,6.00e-26,108;CL:0000049,6.00e-26,108;CL:0000766,7.77e-25,72;CL:0002032,2.53e-17,161;CL:0000837,2.53e-17,161;CL:0000037,6.92e-16,168;CL:0000988,5.69e-15,177;CL:0002087,9.78e-15,115;CL:0002031,2.33e-14,120;CL:0000219,2.67e-14,386;CL:0000134,1.09e-12,354;CL:0002320,5.57e-12,361;CL:0000738,5.99e-12,136;CL:0000723,4.67e-09,433;CL:0000048,5.22e-09,427;CL:0000034,1.84e-08,441;CL:0000235,3.67e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;5.52e-23;42!CL:0000049;1.21e-08;108 | |||
|ontology_enrichment_disease=DOID:1240!1.25e-09!39;DOID:2531!1.67e-08!51;DOID:0060083!1.67e-08!51;DOID:8692!2.70e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.41e-12!80;UBERON:0001474!9.81e-11!86;UBERON:0002405!4.33e-10!115;UBERON:0002384!1.16e-09!375;UBERON:0002193!1.38e-09!112;UBERON:0002390!1.46e-09!102;UBERON:0003061!1.46e-09!102;UBERON:0004765!7.99e-08!101;UBERON:0001434!7.99e-08!101;UBERON:0001737!8.89e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.43e-13;9!UBERON:0001557;8.43e-13;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.60e-22,76;UBERON:0001474,6.06e-20,82;UBERON:0002405,5.54e-18,93;UBERON:0002390,1.20e-17,98;UBERON:0003061,1.20e-17,98;UBERON:0004765,4.58e-17,90;UBERON:0001434,4.09e-16,100;UBERON:0002193,1.25e-15,108;UBERON:0001737,5.47e-13,9;UBERON:0002384,5.06e-11,371;UBERON:0002204,1.65e-08,167 | |||
|phase1_expression=0.726713517082227,1.07050261945492,0.845726424575827,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0,0.982935746006035,0,0.218441372130172,0.263766978228454,0.123766352960047,0,1.34465029290355,0.602694528023977,0,0,0.492484232307152,0.204000691244253,0.626909442956176,0,0.136874425072884,0.502170558379211,1.52826811495903,0.821005894499457,0.944529375764151,0,0,0.154816123316076,0,0.90361775633475,0.369754010166788,0.309868802321207,0.710846162437108,0,0,0,0,0.447830948479849,1.6194683300949,0,3.34415949192999,2.26725566213286,3.63876091781724,3.0215774797739,5.34518254428373,4.95530193432166,3.16461631554365,2.56160706529101,2.60130452877444,6.89491361473237,7.74581620300591,8.12558919566051,4.70605848856512,5.18521685109907,2.9214052977861,6.12167784741805,1.60464513538047,5.11469700639233,1.31940520074686,2.19410023383795,3.40979800426155,10.447532590629,6.24123747160254,13.0792672289071,2.51248665256743,2.08593167368081,2.17188844705117,7.26479403160043,2.94622108790052,8.22802207346299,1.26753171787165,0.637812899895131,0.419317291016752,0.336985893439485,0.450530678524519,0,0,0.79566670879636,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0.790152254325231,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.130059347559878,0.164437904603676,0,0.579606171470105,0.14828656316206,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,1.80719576192283,1.00267582127178,1.15877215168659,0,0,0.0945348171640679,0.443458794925128,0.263504357079378,0.327447688744282,0.364295288292542,2.59549109949101,0,0,1.06366368415092,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0.419499436209906,1.92582629358047,0,0.258416759169329,1.06729878806013,0.33472061276467,0.402829317109147,0,0.732186172644509,0.735326160691737,0.81014194788176,0.267899184852239,0.898117490504679,0,0,0.949265659568129,0,0,0,0,0.496971951695318,0.379891534993739,0.662045904066094,0.860509862246441,0.354668382198357,0,2.1349799145941,0.24666754841716,0,0.134710672069688,0.490385709340376,0,0.576175924479999,0.234321431833797,0.936480230490962,0.570471821544449,0.597794722207204,0.469737994575059,0.809364721840658,1.12360645361799,0.204154171254893,0.61417158655884,0.206651562351531,0,0.247266929278557,0,0,0.673344455816265,0.125118519871964,0,0,0,0,0,0.717558542755448,0.213557388818567,0.635795703478686,0.900273288253207,0.103052529238439,0,0.18611685633159,0.337552664482532,0.194874010322397,0.252433774244115,0.184099797284599,0.323292113637624,1.06502877754984,0.403008392910561,0.169560592310488,0.193260853163297,1.09098448236334,0.286804595389004,0.121973706129595,0,0.232387885739037,0.207322110030741,0.504641701751257,0,1.56449532329816,0,0,1.85747171212792,0,3.66751080123516,2.19160097101532,2.41011029883482,3.30881918197182,1.74303555273925,1.89816495288877,2.02246962240247,2.15843611637881,2.30848294167834,0.738155454624648,0,0,0,2.53510069643662,6.87979051674338,2.36315962672562,0,0,0,0.329250856225877,0,0.804231779293047,0.0925884451585296,0,0,0,0,0,0.288732895522148,0.462985512576611,0.761016608938393,0,0,0.738651018262192,2.10603838625314,2.0808362720422,0,0,0,0.179117045405697,0.290633938513962,0.766765358330422,0,1.23267807618516,0.829312462163088,0.432359860250884,0.6312121671319,1.0159663086747,1.90994212779139,1.17217447210047,0,3.18765227380303,3.30377363628309,0.571652865261156,0.336393253036082,0.43596006883328,0.51336800074665,0.258543431515556,3.57656445851882,1.690605505112,0,0,1.02882949704857,0,0.799266537048298,0.857867961948885,0.542621605391443,1.64648067356154,0.65147236858747,0,0,1.20575750823834,0,0.099972991182057,7.29742683847143,5.02257091432126,14.7583757638122,0,0,0,0.723906533337896,0.61642896765115,0.537182889719687,1.12085143993527,0,0,0,0,0,0,0.167516265334349,0,0,2.99161459204025,0,0,0.500170521059677,0.542530047399471,0.207970861530807,0,0.157702415033935,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0.686286847621712,0.206768026122887,0,0.213455115606889,0,0,0,0.744323423456331,0,0,0.256278298511402,0,0,0,1.3878872442239,0.355123450626254,0.9033987161519,1.55776328755086,0.929683027679674,0,0,0.276242966807689,0.114814448164607,0.182091168006717,0,0,0.231046011313244,0,0,0.316654886678627,1.13733384070897,0,0.431831832204279,1.54227252690289,0,0,0.764628819135115,0,0,0.877039506583738,0.522870902049801,0.256450125116389,0.328014645699706,0,0.412164046590889,0,0.165018999841176,0.574265537996172,0,0,0.676695028044854,1.07834031980251,0.307007349452259,0.275673144969061,0.751941714077915,1.30515024522806,0.852266274161009,0.267096106940212,0,0.384380134730212,0.127612712494584,0.10115778085555,0,0.31481234683064,0.6970372701606,0.616067160352178,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0.855877976067841,1.27281299170375,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0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| |||
|short_description=p6@SLC43A3 | |||
}} |
Revision as of 07:43, 11 January 2014
Short description: | p6@SLC43A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC43A3_5end |
Coexpression cluster: | C2137_CD14_mesenchymal_Melanocyte_chronic_acute_anaplastic_bile |
Association with transcript: | -472bp_to_ENST00000525651_5end |
EntrezGene: | SLC43A3 |
HGNC: | 17466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.77e-36 | 48 |
phagocyte | 2.77e-36 | 48 |
classical monocyte | 1.49e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.49e-30 | 42 |
monopoietic cell | 1.35e-29 | 59 |
monocyte | 1.35e-29 | 59 |
monoblast | 1.35e-29 | 59 |
promonocyte | 1.35e-29 | 59 |
macrophage dendritic cell progenitor | 3.27e-28 | 61 |
myeloid lineage restricted progenitor cell | 1.54e-26 | 66 |
granulocyte monocyte progenitor cell | 5.96e-26 | 67 |
myeloid cell | 6.00e-26 | 108 |
common myeloid progenitor | 6.00e-26 | 108 |
myeloid leukocyte | 7.77e-25 | 72 |
hematopoietic oligopotent progenitor cell | 2.53e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.53e-17 | 161 |
hematopoietic stem cell | 6.92e-16 | 168 |
hematopoietic cell | 5.69e-15 | 177 |
nongranular leukocyte | 9.78e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.33e-14 | 120 |
motile cell | 2.67e-14 | 386 |
mesenchymal cell | 1.09e-12 | 354 |
connective tissue cell | 5.57e-12 | 361 |
leukocyte | 5.99e-12 | 136 |
somatic stem cell | 4.67e-09 | 433 |
multi fate stem cell | 5.22e-09 | 427 |
stem cell | 1.84e-08 | 441 |
macrophage | 3.67e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.60e-22 | 76 |
bone element | 6.06e-20 | 82 |
immune system | 5.54e-18 | 93 |
hematopoietic system | 1.20e-17 | 98 |
blood island | 1.20e-17 | 98 |
skeletal element | 4.58e-17 | 90 |
skeletal system | 4.09e-16 | 100 |
hemolymphoid system | 1.25e-15 | 108 |
larynx | 5.47e-13 | 9 |
connective tissue | 5.06e-11 | 371 |
musculoskeletal system | 1.65e-08 | 167 |