FFCP PHASE1:Hg19::chr11:47664072..47664125,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23788 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17587 | |||
|TSSclassifier=strong | |||
|UniProt=E9PNT8,F5H3Y2 | |||
|association_with_transcript=0bp_to_ENST00000530558,ENST00000542981,uc001nge.2_5end | |||
|description=CAGE_peak_1_at_MTCH2_5end | |||
|id=chr11:47664072..47664125,- | |||
|ontology_enrichment_celltype=CL:0000548!3.09e-27!679;CL:0000004!3.09e-27!679;CL:0000255!3.09e-27!679;CL:0000012!2.02e-26!682;CL:0000144!8.83e-25!625;CL:0000220!1.63e-24!246;CL:0002321!4.88e-24!248;CL:0002371!4.47e-23!591;CL:0000055!1.85e-21!180;CL:0000222!9.04e-17!119;CL:0000003!1.32e-13!722;CL:0000183!6.64e-11!59;CL:0000680!8.34e-11!57;CL:0000056!8.34e-11!57;CL:0000355!8.34e-11!57;CL:0000066!1.35e-10!254;CL:0000393!2.39e-10!60;CL:0000211!2.39e-10!60;CL:0000187!5.52e-10!54;CL:0000192!9.23e-10!42;CL:0000514!9.23e-10!42;CL:0000063!4.50e-09!578;CL:0000221!2.20e-08!71;CL:0000359!2.27e-07!32;CL:0000723!7.84e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.70e-07;32!CL:0000192;6.56e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.87e-24,250;CL:0000222,3.98e-17,121;CL:0000680,1.13e-10,58;CL:0000056,1.13e-10,58;CL:0000355,1.13e-10,58;CL:0000066,1.31e-10,253;CL:0000393,3.13e-10,61;CL:0000211,3.13e-10,61;CL:0000187,7.38e-10,55;CL:0000192,1.34e-09,43;CL:0000514,1.34e-09,43;CL:0000221,1.59e-08,72;CL:0000359,2.27e-07,32;CL:0000213,4.58e-07,58;CL:0000215,4.58e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;6.56e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.09e-11!83;UBERON:0002329!1.09e-11!83;UBERON:0003077!1.09e-11!83;UBERON:0003059!1.09e-11!83;UBERON:0007282!1.09e-11!83;UBERON:0009618!1.09e-11!83;UBERON:0007285!1.09e-11!83;UBERON:0004290!1.48e-11!70;UBERON:0005256!2.17e-11!143;UBERON:0000486!2.71e-10!82;UBERON:0000490!1.04e-09!138;UBERON:0001134!3.00e-09!61;UBERON:0002036!3.00e-09!61;UBERON:0003082!3.00e-09!61;UBERON:0002385!1.05e-08!63;UBERON:0001015!1.05e-08!63;UBERON:0000383!1.05e-08!63;UBERON:0002049!1.23e-08!79;UBERON:0007798!1.23e-08!79;UBERON:0002100!1.71e-08!216;UBERON:0003914!2.15e-07!118;UBERON:0000055!3.82e-07!69;UBERON:0001637!7.26e-07!42;UBERON:0003509!7.26e-07!42;UBERON:0004572!7.26e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,8.15e-13,78;UBERON:0000490,1.14e-11,148;UBERON:0002329,1.91e-11,71;UBERON:0003059,1.91e-11,71;UBERON:0007282,1.91e-11,71;UBERON:0004290,1.91e-11,71;UBERON:0009618,1.91e-11,71;UBERON:0003077,5.75e-11,72;UBERON:0007285,5.75e-11,72;UBERON:0007524,8.31e-11,73;UBERON:0000486,3.26e-10,83;UBERON:0003104,1.32e-09,160;UBERON:0009142,1.32e-09,160;UBERON:0005256,2.80e-09,122;UBERON:0001134,3.77e-09,62;UBERON:0002036,3.77e-09,62;UBERON:0003082,3.77e-09,62;UBERON:0002049,7.65e-09,78;UBERON:0007798,7.65e-09,78;UBERON:0002385,1.29e-08,64;UBERON:0001015,1.29e-08,64;UBERON:0000383,1.29e-08,64;UBERON:0002100,1.85e-08,199;UBERON:0003914,1.99e-07,117;UBERON:0000055,2.45e-07,68;UBERON:0001637,7.26e-07,42;UBERON:0003509,7.26e-07,42;UBERON:0004572,7.26e-07,42 | |||
|phase1_expression=82.1186274302916,101.911849372108,75.1286973831526,97.0710994025365,94.3087909241577,72.4040975003306,93.7209549222749,77.0698245580734,101.862394997937,88.4642171405432,88.6207483324983,78.638893966862,77.5474915991654,55.4473261261009,62.965501388304,68.5771649380811,80.7610667552129,73.0310090387373,77.0933822089001,86.9234670022123,86.292292396319,59.2429423593586,61.8269732203083,70.7640777626811,68.1696532999779,66.7853166237094,69.8676016219038,68.4783797429009,18.4881210118985,21.8782756915411,19.6616476611417,76.3119616317509,73.7954501006713,79.8668661960261,87.3830022545802,85.3015394924529,45.8016685362362,26.0377842009982,26.0707781711184,19.3139674937108,70.3094589113362,63.159264873701,49.712084553398,33.0054002029612,27.5849438892831,28.6249192201623,34.8643555358527,35.7716062578988,31.8997562021957,36.5369338249131,27.921517011672,26.249527517633,34.1298223929252,29.692295444856,29.7938270507552,31.2482283640724,35.2048933574621,30.5623938845315,36.1178992997665,28.5626834097723,26.2128221577607,33.9746839192318,26.528666463677,26.425934533027,29.8915515787442,24.397564661719,16.8162007228805,23.8686231993906,27.1171117578505,24.3251506069731,32.6915731422019,25.0428792471544,21.2029799585393,47.5324394201869,40.6074212933233,54.7209064776861,40.9999503684707,39.4965228173162,27.1626241518065,44.4619880236348,40.1811687942162,36.5328307529268,42.2390986707174,33.31445528699,24.016749854316,28.590924911956,29.6293030406649,34.485146397269,35.0353782575977,42.9324189540914,21.0608798570496,19.9660644386119,19.4959346343867,37.0079720021272,22.980851082243,46.0922148356385,18.4907183907003,19.2575273747091,16.4481199199607,50.6575081033755,22.1627141310841,25.5661815096756,19.4826728407911,42.1131527025956,26.8091375802102,32.1224147146251,22.4767206924963,58.6658244343592,52.1537983715112,44.7271100521999,51.4011033081678,56.5116017183352,18.2392472689334,19.2629396224593,19.8617495229456,53.7086284386464,28.3583165265422,29.2083328660235,21.2536541296382,29.3080181178169,16.9281698002669,30.414465422348,24.0920190524436,28.157054453972,43.7257542933211,25.8087204727978,36.129631864526,19.3542473495743,20.3254548795466,16.7996308504047,24.3806866313962,69.0821885494745,67.3835700915405,82.4081267436811,73.6966728634758,55.910756318878,79.5285947051099,46.716947549053,71.1847173245431,66.7405486362318,60.9573412710295,74.8545416469428,75.4091246765562,88.9882662682631,61.6640047943898,55.7215159357655,68.2074337461778,24.5645343034502,28.5997455390064,30.8309726103539,87.2566968339835,89.4643978910369,60.0553067781138,68.4022609728052,79.2853934436722,77.583287827099,81.2990419828193,87.8616981175718,94.2780596119782,78.9940646124622,78.5517168362837,88.1915642633475,70.0458105163247,74.6356053102113,87.49533037123,61.0810141463106,45.5794626431125,56.0805172806945,78.1914851076005,101.57142557379,77.8607411704231,3.9534125230819,11.6334079244498,68.4667661863779,67.091213478868,78.2576562087103,52.3016264212214,31.2651916616207,70.579008057473,75.6914760192115,51.2395179502584,71.5335890409764,65.9767395047505,62.5057518403353,73.7213183041699,74.7705692565961,51.2796572787199,72.8739653003107,101.452024969854,92.4164350902008,84.5879531923194,72.2222166659154,77.0515215192306,92.4166308100795,69.2082640554088,86.9666966567317,66.0251741713141,62.9641514359488,57.1186606633466,89.1958134699266,63.238396479829,84.5047292049412,75.5715860026664,86.7210681465493,64.0907326486023,76.0089733581569,57.0904623845068,80.0831213109748,36.2367064091501,49.5453142059076,68.665935975698,31.2094739927778,52.9690000285576,39.1613620869356,67.9326525610303,39.8312144089388,72.8828798605766,40.3894038790583,56.886837360941,44.2910195683545,41.8911319169605,81.508447466161,94.6148105092521,68.6076028729704,67.641037906527,65.1046431533039,44.6423764434319,45.5902403025909,51.4739166911966,51.5195443426391,74.1823301574347,58.7613548112086,84.4827474581006,60.4646481901312,104.982540227885,57.1172551479334,75.0754660936369,78.2007948263368,80.4148971672545,70.6162317558602,72.79402200338,72.1180959945864,73.0793506862178,87.3706876877865,71.6208347707513,71.947718348975,62.0050581884704,68.7184691636885,79.8453581982916,67.6240072373493,89.9960747234999,80.5918317675653,93.9355951623432,75.9316530993199,71.0873174779196,80.29373521971,85.2759717625021,77.5572097477575,74.1903816397836,55.8308324305933,79.1714181904089,121.672369877711,56.2892233898566,73.0361551342984,48.3723820251585,74.9261863879973,93.0600880278988,71.7258153924436,77.440031000009,72.1128376159693,79.5280929662293,97.5797785630621,81.3012457719343,116.229954143603,61.3134767925837,64.7912194397706,61.3475880514511,79.6336991528256,91.6284603204855,45.3250178864268,44.3764107426659,17.0009054743433,14.2678753882792,14.8966071443128,109.025884499654,101.608921198502,155.899204789362,114.618538835213,105.706662499017,115.932420327752,88.3203676828487,105.963874706366,99.3988956939879,93.946344136637,79.3728334752755,39.3422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| |||
|short_description=p1@MTCH2 | |||
}} |
Revision as of 07:40, 11 January 2014
Short description: | p1@MTCH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MTCH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000530558, ENST00000542981, uc001nge.2_5end |
EntrezGene: | MTCH2 |
HGNC: | 17587 |
UniProt: | E9PNT8F5H3Y2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.87e-24 | 250 |
mesodermal cell | 3.98e-17 | 121 |
muscle precursor cell | 1.13e-10 | 58 |
myoblast | 1.13e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.13e-10 | 58 |
epithelial cell | 1.31e-10 | 253 |
electrically responsive cell | 3.13e-10 | 61 |
electrically active cell | 3.13e-10 | 61 |
muscle cell | 7.38e-10 | 55 |
smooth muscle cell | 1.34e-09 | 43 |
smooth muscle myoblast | 1.34e-09 | 43 |
ectodermal cell | 1.59e-08 | 72 |
vascular associated smooth muscle cell | 2.27e-07 | 32 |
lining cell | 4.58e-07 | 58 |
barrier cell | 4.58e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 8.15e-13 | 78 |
unilaminar epithelium | 1.14e-11 | 148 |
somite | 1.91e-11 | 71 |
presomitic mesoderm | 1.91e-11 | 71 |
presumptive segmental plate | 1.91e-11 | 71 |
dermomyotome | 1.91e-11 | 71 |
trunk paraxial mesoderm | 1.91e-11 | 71 |
paraxial mesoderm | 5.75e-11 | 72 |
presumptive paraxial mesoderm | 5.75e-11 | 72 |
dense mesenchyme tissue | 8.31e-11 | 73 |
multilaminar epithelium | 3.26e-10 | 83 |
mesenchyme | 1.32e-09 | 160 |
entire embryonic mesenchyme | 1.32e-09 | 160 |
trunk mesenchyme | 2.80e-09 | 122 |
skeletal muscle tissue | 3.77e-09 | 62 |
striated muscle tissue | 3.77e-09 | 62 |
myotome | 3.77e-09 | 62 |
vasculature | 7.65e-09 | 78 |
vascular system | 7.65e-09 | 78 |
muscle tissue | 1.29e-08 | 64 |
musculature | 1.29e-08 | 64 |
musculature of body | 1.29e-08 | 64 |
trunk | 1.85e-08 | 199 |
epithelial tube | 1.99e-07 | 117 |
vessel | 2.45e-07 | 68 |
artery | 7.26e-07 | 42 |
arterial blood vessel | 7.26e-07 | 42 |
arterial system | 7.26e-07 | 42 |